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    16 January 2023, Volume 56 Issue 2
    CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS
    Mapping and Analysis of QTL for Embryo Size-Related Traits in Tetraploid Wheat
    CHEN JiHao, ZHOU JieGuang, QU XiangRu, WANG SuRong, TANG HuaPing, JIANG Yun, TANG LiWei, $\boxed{\hbox{LAN XiuJin}}$, WEI YuMing, ZHOU JingZhong, MA Jian
    Scientia Agricultura Sinica. 2023, 56(2):  203-216.  doi:10.3864/j.issn.0578-1752.2023.02.001
    Abstract ( 380 )   HTML ( 68 )   PDF (1615KB) ( 180 )   Save
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    【Objective】 This study is to excavate embryo-related quantitative trait loci (QTL) with potential breeding value, to explore the genetic relationship between embryo and other agronomic traits in tetraploid wheat, and finally to aim at laying an important foundation for the fine mapping and breeding utilization of embryo-related traits in the future. 【Method】A total of 121 F8 recombinant inbred lines (RIL) constructed by crossing tetraploid durum wheat (Ailanmai) and wild emmer wheat (LM001) were used. This RIL population was planted in five different environments including Chongzhou (2018-2020), Wenjiang (2020), and Ya'an (2020) in Sichuan Province for phenotypic evaluation of embryo length (EL), embryo width (EW), embryo length/embryo width (EL/EW), embryo length/kernel length (EL/KL), embryo width/kernel width (EW/KW), and embryo area (EA). QTL mapping was performed based on a genetic linkage map constructed based on the wheat 55K SNP. 【Result】 The embryo size-related traits showed approximately normal distribution in the RIL population satisfying the genetic characteristics of quantitative traits. A total of 27 QTL for embryo size-related traits were detected in five environments over three years. Among them, seven ones controlling EL could contribute 7.75%-21.74% of phenotypic variation. Seven QTLs controlling EW could explain 7.67%-33.29% of phenotypic variation. Five stable and major QTLs (QEL.sicau-AM-3B, QEW.sicau-AM-2B, QEW/KW.sicau-AM-2B, QEL/EW.sicau- AM-2B-1 and QEA.sicau-AM-2B) were identified, and they explained 11.88%-18.99%, 21.77%-29.41%, 8.80%-24.92%, 12.79%- 25.69% and 10.47%-15.22% of phenotypic variation, respectively. In addition, four QTL-rich regions were identified in the embryo size-related loci mentioned above. The QTL controlling EL/KL and EL was located on chromosome 1B, that for EW, EL/EW, EW/KW, and EA was located on 2B, that controlling EL and EA was on 3B, and that controlling EL/EW and EW/KW was on 6B. Embryo size was significantly and positively correlated with kernel size. Further, the major QTL for EL, QEL.sicau-AM-3B was co-located with that for kernel length identified previously, but that for EW QEW.sicau-AM-2B was independent of that for kernel width. Four genes likely involved in regulation of embryo size were identified in intervals where major QTL were mapped. 【Conclusion】Five stable and major QTLs were identified: QEL.sicau-AM-3B, QEW.sicau-AM-2B, QEW/KW.sicau-AM-2B, QEL/EW.sicau-AM-2B-1, QEA.sicau-AM-2B, among which QEW.sicau-AM-2B may be novel.

    Development of DNA Molecular ID in Camellia oleifera Germplasm Based on Transcriptome-Wide SNPs
    LIN Ping, WANG KaiLiang, YAO XiaoHua, REN HuaDong
    Scientia Agricultura Sinica. 2023, 56(2):  217-235.  doi:10.3864/j.issn.0578-1752.2023.02.002
    Abstract ( 401 )   HTML ( 78 )   PDF (10200KB) ( 180 )   Save
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    【Objective】Camellia oleifera is a traditional woody oil plant and been widely cultivated in China. In order to facilitate the protection and precise management of C. oleifera cultivars and avoid the phenomenon of homonyms and synonyms, single-nucleotide polymorphism (SNP) marker database of C. oleifera cultivars was established, and a set of core SNPs were selected to construct molecular fingerprint and ID for each cultivar. 【Method】The RNA of developing seeds of 221 C. oleifera clones was extracted and RNA-seq were performed. Using C. oleifera var. ‘Nanyongensis’ genome sequence as reference, high-quality SNPs for C. oleifera were screened and the genotyping of accessions was carried out. Furthermore, the genetic diversity of C. oleifera population and subpopulations were analyzed using SNP data, including observed heterozygosity, expected heterozygosity and polymorphism information content (PIC) of the SNPs, etc. The SNP loci were further filtered by their polymorphism and location information to obtain the optimal combination of core SNP loci. Sanger-seq was performed to verify the core SNP loci. The fingerprints of each clone were formed according to the genotypes of the core SNPs. The molecular IDs of C. oleifera clones were finally constructed by combining the basic information and fingerprint of C. oleifera clones. 【Result】A total of 1 849 953 high-quality SNP loci were obtained from the transcriptomes of C. oleifera. The average values of observed heterozygosity, expected heterozygosity, fixed index, PIC and minor allele frequency of the C. oleifera population were 0.2966, 0.2462, -0.2048, 0.2073, and 0.1648, respectively. The genetic differentiation among the subpopulations of C. oleifera was minor with the high level gene flow, while the main variation was inside of the subpopulation. Filtered by PIC, LD, etc., 31 core SNP loci were screened out to distinguish all C. oleifera clones. The genotypes of all accessions in the eight core loci were further detected using Sanger-seq, and the verified rates were over 91.36%. All C. oleifera clones used in this study can be distinguished using the DNA fingerprints constructed by the 31 core SNPs. Based on the fingerprint of 31 SNP markers and the basic information of C. oleifera clones, a molecular ID of each clone, which composed of 66 digits, was formed finally. 【Conclusion】According to the polymorphism information of SNP markers, 31 core SNP loci were catched. And all C. oleifera clones were accurately distinguished. Furthermore, The DNA fingerprints of 221 C. oleifera clones were constructed by the 31 SNP markers. A unique molecular identity code for each germplasm was constructed using the DNA fingerprints and the converted serial codes from information of the C. oleifera clones. Finally, the bar codes and quick response (QR) codes are generated as the molecular ID, which can be quickly identified by the code scanning equipment.

    TILLAGE & CULTIVATION·PHYSIOLOGY & BIOCHEMISTRY·AGRICULTURE INFORMATION TECHNOLOGY
    Effects of Rhizosphere Oxygen Environment on Phosphorus Uptake of Rice Seedlings and Its Physiological Mechanisms in Hydroponic Condition
    XIAO DeShun, XU ChunMei, WANG DanYing, ZHANG XiuFu, CHEN Song, CHU Guang, LIU YuanHui
    Scientia Agricultura Sinica. 2023, 56(2):  236-248.  doi:10.3864/j.issn.0578-1752.2023.02.003
    Abstract ( 321 )   HTML ( 39 )   PDF (575KB) ( 182 )   Save
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    【Objective】This study was conducted to research the effect of rhizosphere oxygen environment on the phosphorus uptake of rice seedlings and its physiological mechanisms, so as to provide a theoretical basis for the new cultivation measures to promote the absorption and utilization of phosphorus uptake of rice. 【Method】Two varieties, including Zhenshan 97B and Miyang 46, were cultured in nutrient solution with different oxygen content (DOC) levels (medium oxygen: DOC 2.5-3.5 mg·L-1, high oxygen: DOC>6.0 mg·L-1, continuous bubbling with atmospheric air, and normal conditions as CK) controlled by on-line dissolved oxygen meter. After different oxygen treatments, the rice seedling growth (biomass, root morphological structure), root physiology (root activity, phosphorus absorption kinetics, phosphatase activity, root secretion of organic acids, citric acid, etc.), and phosphorus absorption and accumulation were measured and analyzed. 【Result】 (1) The medium oxygen treatment significantly promoted the occurrence and growth of tillers, and increased the biomass, root shoot ratio, phosphorus content and accumulation of the two tested varieties; The high oxygen treatment reduced the plant height and shoot biomass, but had no significant effect on root biomass. (2) Compared with the control, the total root length, surface area and total volume of root were significantly increased, and the average root diameter were significantly decreased after the medium oxygen treatment, while the high oxygen treatment was opposite to the medium. The medium and high oxygen treatment could promote the secretion of organic acids (the total amount of organic acids, oxalic acid, tartaric acid, and citric acid content increased), and increase the activity of acid phosphatase in leaves and roots. However, compared with high oxygen, the medium oxygen treatment significantly enhanced the activity of roots, optimized the kinetic parameters of phosphorus absorption, increased Imax, and decreased Km and Cmin. (3) The results of correlation analysis showed that the phosphorus accumulation and aboveground phosphorus content were significantly positively correlated with root morphology (total root length, root surface area, average diameter and total volume of root), root activity, absorption kinetic parameters Imax, the content of oxalic acid and tartaric acid, and negatively correlated with phosphorus absorption kinetic parameters Km and Cmin. The root phosphorus content of root was significantly positively correlated with root acid phosphatase, root activity, total organic acid and oxalic acid content, but not significantly with other indexes. 【Conclusion】The moderate increase of dissolved oxygen concentration (medium oxygen treatment) could improve the activity of acid phosphatase in leaves and roots, root activity, the root secretion content of oxalic acid, tartaric acid and citric acid, optimize the root morphological structure (increase the root surface area) and phosphorus uptake kinetics of rice seedlings so as to increase phosphorus content and accumulation of rice. Therefore, the selecting appropriate cultivation measures could change the rhizosphere oxygen environment and improve the ability of phosphorus absorption of rice in field planting.

    Effects of Direct Seeding Cultivation Method on Growth Stage, Lodging Resistance and Yield Benefit of Double-Cropping Early Rice
    ZHANG XiaoLi, TAO Wei, GAO GuoQing, CHEN Lei, GUO Hui, ZHANG Hua, TANG MaoYan, LIANG TianFeng
    Scientia Agricultura Sinica. 2023, 56(2):  249-263.  doi:10.3864/j.issn.0578-1752.2023.02.004
    Abstract ( 315 )   HTML ( 41 )   PDF (775KB) ( 154 )   Save
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    【Objective】The objective of this study was to investigate the effects of direct seeding cultivation on the growth period, lodging resistance, yield and economic benefits of different rice varieties, in order to provide a theoretical basis for the application and promotion of mechanized direct seeding rice. 【Method】 For the early rice in 2020 and 2021, the conventional rice varieties with a large area in Guangxi production, including Guiyu 9, Guiyu 11, Guiyefeng, Guangliangxiang 2, and hybrid rice Y Liangyou 1, were used as test materials. In the field, using the traditional manual transplanting as a control, the field was accurately direct seeding. A split plot design was used in this experiment with planting method as the main plot, with rice varieties as the split plot, and set up three replications. The length of the growth period was observed, the morphology of main stem and the characteristics of the basal stem, as well as the lodging indicators such as breaking resistance, bending moment and lodging index, were calculated, the yield and yield components were measured at the maturity stage, and the cost and economic benefits were calculated too. 【Result】(1) The growth period of direct seeding was shortened by about 2-6 days, which was mainly reflected in the period from sowing to the beginning of young spike. (2) The lodging resistance of direct seeding rice was relatively poor, and its plant height, center of gravity height and panicle dry weight were lower than that of transplanted rice; The stem thickness, wall thickness, fresh weight and dry weight of its N2 stem were also lower than that of transplanted rice, and the length of the stem of direct seeding rice was higher than that of transplanted rice, which might be the main reason for the weak lodging resistance of the direct rice. (3) Among the varieties tested, the actual yields of the remaining four rice varieties were lower than those of transplanted under direct-seeded cultivation, except for Yliangyou1. For varieties with relatively short growth period in the test materials, the yield under direct seeding conditions is significantly lower than that of transplanting, while for varieties with relatively long growth period, the yield difference between planting methods is not significant, among the yield components, the increase in the number of grains per panicle and the seed setting rate were the main factors for increasing the yield of direct seeding rice. (4) From the analysis of economic benefits, among the varieties tested, Guiyu 11, which had a shorter growth period, had a significantly lower yield and economic benefit in direct seeding method, and the economic benefits of direct seeding rice of the remaining four varieties were higher than those of transplanted rice; The main reason for this was that direct seeding rice saved labor costs in seedling and transplanting link. 【Conclusion】At present, it was an urgent to develop a light and simple production model of rice with the main goal of preserving area and increasing efficiency. Compared with transplanted rice, direct seeding rice had obvious advantages, such as shortening the growth period and reducing production costs. There was a certain risk of lodging, for the yield was easily affected by variety characteristics and environmental factors. Therefore, the lodging-resistant varieties with medium maturity, reasonable stem length at the base, thick stems and thick stem walls could be selected in the direct seeding cultivation of early rice. In cultivation management, the proportion of ear fertilizer should be appropriately increased to compensate for insufficient number of grains per panicle and seed setting rate could improve the yield of direct seeding rice.

    PLANT PROTECTION
    Distribution and Variation of PWL Gene Family in Rice Magnaporthe oryzae from Heilongjiang Province and Hainan Province
    LIU RUI, ZHAO YuHan, FU ZhongJu, GU XinYi, WANG YanXia, JIN XueHui, YANG Ying, WU WeiHuai, ZHANG YaLing
    Scientia Agricultura Sinica. 2023, 56(2):  264-274.  doi:10.3864/j.issn.0578-1752.2023.02.005
    Abstract ( 246 )   HTML ( 34 )   PDF (2531KB) ( 104 )   Save
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    【Objective】The objective of this study is to understand the distribution and variation characteristics of PWL gene family in different Magnaporthe oryzae strains, and to provide a basis for studying the genetic diversity and specificity of different M. oryzae strains. 【Method】A total of 8 pairs of specific primers were designed for the promoter region and CDS region of the PWL gene family by referring to the avirulence gene sequence published in NCBI. DNA was extracted from 397 single spore isolates of M. oryzae collected from different regions of Heilongjiang Province and Hainan Province in 2020. PCR amplification of avirulence genes was conducted and the genes were detected by agarose gel electrophoresis. Representative strains from different regions were selected from the test results to sequence and analyze the amplified fragments. The sequencing results were compared with the base and amino acid sequences of the corresponding avirulence gene promoter region and CDS region in NCBI. 【Result】In the results of PCR electrophoresis, PWL1 was not detected in all strains. The specific fragments of PWL2, PWL3 and PWL4 were amplified in Heilongjiang Province and Hainan Province, indicating that these three genes were distributed in both provinces and had different distribution frequencies and variation types. Among them, PWL2 had the highest distribution frequency in Heilongjiang Province and Hainan Province, which were 98.14% and 100%, respectively. The distribution frequencies of PWL3 and PWL4 in the two provinces were significantly different. The frequencies of these two genes in Heilongjiang strains were 89.30% and 82.79%, respectively, while in Hainan strains were 5.49%. Through the analysis of avirulence gene combinations, the results showed that the combination types could be divided into six types, namely PWL(f), PWL2, PWL3, PWL2+PWL3, PWL2+PWL4, PWL2+PWL3+PWL4. Among them, Heilongjiang strains contained all combination types, and Hainan strains contained only two, indicating that Heilongjiang strains were more abundant in avirulent genotypes than Hainan strains. By sequencing the PCR products of the PWL gene family, it was found that the PWL gene family had abundant variation sites in the promoter region and CDS region, and was divided into nine types with point mutations and deletions as the main variation types, and the variation types of strains from different populations were specific and consistent. Among them, five variant types PWL2- (1, 2, 3, 4, 5) were detected in PWL2, base sequence changes led to amino acid sequence missense mutations; two mutation types were detected in PWL3 and PWL4, which were PWL3- (1, 2) and PWL4- (1, 2), respectively. Both of them had frameshift mutations that caused changes in the following amino acids. 【Conclusion】The distribution and variation types of PWL gene family in M. oryzae strains from different populations have regional differences, and the variation sites are abundant.

    Isolation of Dominant Actinomycetes from Soil of Waxberry Orchards and Its Disease Prevention and Growth-Promotion Function
    WANG XuanDong, SONG Zhen, LAN HeTing, JIANG YingZi, QI WenJie, LIU XiaoYang, JIANG DongHua
    Scientia Agricultura Sinica. 2023, 56(2):  275-286.  doi:10.3864/j.issn.0578-1752.2023.02.006
    Abstract ( 249 )   HTML ( 46 )   PDF (3796KB) ( 134 )   Save
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    【Objective】The objective of this study is to isolate and screen the dominant actinomycetes from plant roots and rhizosphere soils in waxberry orchards, explore the seasonal characteristics of the number and distribution of actinomycete populations, and to analyze its application potential in biological control and plant growth promotion. 【Method】Samples of plant roots and rhizosphere soils were collected in different seasons from waxberry orchards, and the dominant actinomycetes were isolated and purified by the dilution plate method. Selective media were used to analyze the plant growth-promoting rhizobacteria (PGPR) characteristics of dominant actinomycetes such as nitrogen fixation, phosphorus solubilization, and potassium solubilization. The CAS plate assay was used to detect siderophore production capacity. The Salkowski assay was used to detect IAA production capacity. The colorimetric method was used to detect ACC deaminase activity. The strains with excellent growth-promoting characteristics were identified by test tubes for pro-biogenesis, and their antibacterial activity was analyzed by the flat-confrontation method and the Oxford cup method. Finally, the taxonomic status of the strain with good characteristics was identified by morphological observation, physiological and biochemical tests, and 16S rDNA sequence analysis. 【Result】A total of 127 strains of dominant actinomycetes were isolated from two waxberry orchards at different altitudes, including 32 from plant roots and 95 from rhizosphere soils. Compared with those isolated in spring and summer, the actinomycetes isolated in autumn and winter had greater quantity and variety, stronger inhibition and promotion ability. The number of dominant actinomycetes isolated at higher altitudes was significantly higher than at lower altitudes in spring and summer, while in autumn and winter the number of actinomycetes isolated at lower altitudes exceeded that of higher altitudes and far exceeded the total number of actinomycetes isolated in spring and summer in that area. Finally, 46 strains of different species of actinomycetes were obtained, and through the analysis of PGPR characteristics, 35 strains of actinomycetes had obvious growth-promoting characteristics. Among them, strain Sz-11 had 6 growth-promoting characteristics, including nitrogen fixation, inorganic phosphorus solubilization, organic phosphorus solubilization, siderophore production, IAA production and ACC deaminase production, and the test tube identification results showed that it could effectively promote the growth and development of rice seedlings. The seedlings inoculated with strain Sz-11 increased by 36.08% and 22.70% in plant height and root length, respectively. Meanwhile, strain Sz-11 showed good antagonistic activity against various plant pathogenic bacteria, with significant and stable antagonistic effects against Xanthomonas oryzae pv. oryzae (Xoo) and Xanthomonas oryzae pv. oryzicola (Xooc). It was tentatively identified as Streptomyces zaomyceticus by observations, and experiments combined with sequencing analysis. 【Conclusion】The number and distribution of dominant actinomycetes in waxberry orchard soil are influenced by season and altitude, and the proportion of growth-promoting strains among culturable actinomycetes is high. S. zaomyceticus has good disease prevention and growth-promoting function, which is expected to be developed into biofertilizer and biocontrol agent for rice production.

    SOIL & FERTILIZER·WATER-SAVING IRRIGATION·AGROECOLOGY & ENVIRONMENT
    Effects of Dextran Modified Urea on Winter Wheat Yield and Fate of Nitrogen Fertilizer
    YAN YanGe, ZHANG ShuiQin, LI YanTing, ZHAO BingQiang, YUAN Liang
    Scientia Agricultura Sinica. 2023, 56(2):  287-299.  doi:10.3864/j.issn.0578-1752.2023.02.007
    Abstract ( 252 )   HTML ( 33 )   PDF (1130KB) ( 127 )   Save
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    【Objective】Saccharides could regulate nitrogen transformation and promote crop growth. However, the effect and mechanism of carbohydrate reaction with urea with different degrees of polymerization on urea nitrogen utilization and crop growth are still unclear. In this paper, the dextran modified urea were prepared by incorporated of glucose (dextran) with different polymerization degrees into 15N labelled urea. The relationship between structure of dextran modified urea and wheat yield and nitrogen utilization was analyzed, in order to provide scientific basis for the application of dextran in improving nitrogen utilization efficiency. 【Method】In the current study, the dextran modified 15N labelled-urea (glucose, maltose, oligomeric maltose, and polydextrose modified urea are represented by GU, MU, OU, and PU, respectively) and ordinary 15N labelled-urea (U) was prepared, and the effects of dextran modified urea on winter wheat (Jimai 22) growth and the fate of fertilizer nitrogen were studied by using soil column cultivation experiments. The relationship between the dextran polymerization degree and the winter wheat yield or fertilizer nitrogen fate was explored by structure investigation of the dextran modified urea using Fourier Transform Infrared (FTIR) and 13C nuclear magnetic resonance (13C NMR) spectroscopy. 【Result】 (1) Compared with U, the dextran modified urea showed a weaker vibration intensity of primary amide at 3 343 cm-1 and 1 601 cm-1 in FTIR spectra, and a new chemical shift peak was detected at 158-171 ppm in 13C NMR spectra, which was a sign that the aldehyde group of dextran and the amine group of urea reacted and that a C=N structure attributed to Schiff base was formed. (2) The wheat yield treated with GU, MU, OU and PU was higher than that of U by 1.9%, 9.2%, 10.3% and 12.3%, respectively. The yield increase was mainly attributed to the improvement of the ears number and grains per ear. (3) The total nitrogen uptake and fertilizer nitrogen uptake of grain of the dextran modified urea treatments were also higher than that under the U treatment by 8.7%-20.0% and 6.1%-13.9%, respectively. MU, OU and PU treatments had a higher nitrogen uptake than GU. (4) Compared with U, the 15N utilization rate and the fertilizer residue rate of dextran modified urea was enhanced by 2.0-6.1 and 1.3-4.9 percentage points, respectively, while the nitrogen loss rate of dextran modified urea was reduced by 6.9-7.4 percentage points. The 15N utilization rate of MU, OU and PU treatments was significantly higher than that of U. (5) Correlation analysis showed that the yield of wheat was significantly positively correlated with the polymerization degree of dextran, while the content of Schiff base was significantly negatively correlated. Among them, the relationship between Schiff base content and wheat yield and 15N utilization rate could be significantly fitted by using one quadratic equation. When the polymerization degree of dextran was 5-8, wheat yield and fertilizer nitrogen utilization rate were the highest. 【Conclusion】 Compared with common urea, the dextran modified urea could increase wheat yield, promote nitrogen absorption and utilization, increase fertilizer nitrogen residue and reduce urea loss. Within a certain range, the wheat yield and nitrogen absorption gradually increased, while the residual fertilizer nitrogen in soil decreased along with the increase of the polymerization degree of dextran. When the polymerization degree of dextran was 5-8, the corresponding modified urea would have the best performance.

    Nitrogen Fertilizer Replacement Value of Livestock Manure in the Winter Wheat Growing Season
    XU JiuKai, YUAN Liang, WEN YanChen, ZHANG ShuiQin, LI YanTing, LI HaiYan, ZHAO BingQiang
    Scientia Agricultura Sinica. 2023, 56(2):  300-313.  doi:10.3864/j.issn.0578-1752.2023.02.008
    Abstract ( 254 )   HTML ( 35 )   PDF (581KB) ( 139 )   Save
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    【Objective】The nitrogen (N) fractions and release characteristics varied much among different types of organic manure. Study and estimation on N fertilizer replacement value of different livestock manures with chemical N as a reference could provide a theoretical basis for rational application of organic fertilizer and scientific combination application of organic and inorganic fertilizers. 【Method】In this study, composted pig manure, chicken manure, cattle manure and chemical fertilizer were selected as the research materials. There were six application rates of N set, i.e. 0, 40, 80, 120, 160 and 200 mg·kg-1 dry soil, respectively. A soil column experiment was conducted to investigate the effects of N derived from manure and chemical fertilizers on wheat yield and N uptake. Furthermore, the relative replacement equivalence of N in three kinds of manure was calculated by using the response between crop N uptake or yield and N application rate. 【Result】 (1) The grain yield and biomass of wheat were increased with the elevated N application rate. When 40-120 mg·kg-1 dry soil input, the increase of grain and biological yield of chemical fertilizer and pig manure was higher than that of chicken manure and cow manure, while there was no significant difference among grain yield treated with chemical fertilizer, pig manure and chicken manure, except being significantly higher than the cow manure, when N input at 160-200 mg·kg-1. (2) At the same N input rate, chemical fertilizer could significantly improve wheat grain N uptake and aboveground N uptake compared with manure treatment. For three kinds of manure treatment, the total aboveground N uptake associated with pig manure was the highest, that with chicken manure followed, and that with cow manure was the low. In this study, the N recovery rate under three kinds of manure treatments was firstly increased and then decreased with the elevated N application level, while the N recovery rate of chemical fertilizer showed a gradually decrease trend. (3) When N input at different application levels, the relative N replacement value of pig manure, chicken manure, and cow manure were 37.7%-84.2%, 23.1%-71.0% and 11.3%-34.2%, respectively, with wheat grain yield as a reference index; 49.2%-91.3%, 23.3%-78.3%, 7.4%-42.2% with aboveground biomass as a reference index; 31.1%-76.3%, 19.8%-67.1%, 6.0%-35.7% with grain N uptake as a reference index; 30.8%-97.1%, 19.8%-75.6%, 7.8%-43.8% with aboveground N uptake as a reference index. There was a positive correlation (P<0.01) between the N replacement value of organic manure and N application rate. 【Conclusion】In this study, the relative N replacement value of organic manure was affected by both organic fertilizer types and N application rate. Within a certain range of N application level, the N replacement value of livestock manure increased with the increase of N application level. The average relative equivalent of N replacement by pig manure, chicken manure, and cow manure were 59.6%, 46.2%, and 23.6%, respectively.

    Accounting Framework of Carbon Footprint on Integrated Cropping-Breeding Farming System: A Case on Maize-Cow-Recycling Manure Model
    CHEN XiaoWei, WANG XiaoLong
    Scientia Agricultura Sinica. 2023, 56(2):  314-332.  doi:10.3864/j.issn.0578-1752.2023.02.009
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    【Objective】Based on scientific agricultural carbon assessment method, the comprehensive assessment of the carbon sequestration and emission reduction effect of the whole life cycle of complex integrated cropping-breeding farming system is the basis for the design and optimization of low-carbon farming system in China from the perspective of the whole industry chain. This study compared five system scenarios and their corresponding carbon footprint assessment frameworks for crop-livestock cycle industry chain, intending to provide the scientific, reasonable and usable methodological references for the creation of low-carbon farming systems. 【Method】A carbon footprint accounting based on life cycle assessment published by ISO 14040 and greenhouse gas accounting provided by IPCC were combined to construct a carbon footprint evaluation framework for the integrated cropping-breeding farming systems under the different system boundaries. The Maize-Cow-Recycling Manure model in tropical crop areas of South China was used as case to validate the effect of the proposed accounting framework. 【Result】 The assessment framework clarified that the whole chain of the integrated and separated crop-livestock models both had six accounting links, including agricultural inputs, crop cultivation, animal breeding, manure management, transportation, and soil carbon sink. Furthermore, the carbon measurement logic of each link and its carbon footprint accounting method were analyzed. The case results showed that the whole-life carbon footprint of the integrated crop-livestock model was 34.44% lower than that of the separated model, showing better carbon sequestration and emission reduction effect. The assessment framework could fully reflect the "indirect emissions" of upstream agricultural production and transportation, as well as the "alternative emissions reduction" of downstream feed substitution and waste recycling after "coupling" or "decoupling" of farming. In addition, the evaluation results were more closely related to the actual production of the farming system in the integrated cropping-breeding farming system by combing the field measurement data and research data, as well as the model evaluation parameters of the background system. 【Conclusion】The carbon footprint assessment framework of farming systems in the integrated cropping-breeding farming system constructed was able to conduct a comprehensive carbon sequestration and emission reduction effects of the industrial chain in integrated and separated systems under the whole life cycle perspective and reasonable system boundary, which provided directions for optimization.

    HORTICULTURE
    The Relationship Between Mastication and Development of Segment Membranes in Citrus Fruits
    LI FeiFei, LIAN XueFei, YIN Tao, CHANG YuanYuan, JIN Yan, MA XiaoChuan, CHEN YueWen, YE Li, LI YunSong, LU XiaoPeng
    Scientia Agricultura Sinica. 2023, 56(2):  333-344.  doi:10.3864/j.issn.0578-1752.2023.02.010
    Abstract ( 424 )   HTML ( 35 )   PDF (5045KB) ( 135 )   Save
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    【Objective】 This study aimed to reveal the development of segment membrane, which contributed to citrus fruit mastication, so as to provide the theoretical basis for fruit mastication trait improvement. 【Method】 Using different citrus types (hybrid citruses including Ehime No. 30 and Nova, Okitsu Wase satsuma mandarin, navel oranges including Yuanfeng and Newhall, and pumeloes including Anjiang and Jiangyong) as reseach materials, the main physiological and biochemical properties of segment membrane were analyzed by comparisons in tissue development and cell ultrastructure. 【Result】 The rough outside but smooth inside of segment membrane occurred in all citrus types. Obviously waxy layer grew on the inside of segment membrane under which one or two cell layers with thickened cell wall arranged neatly. Cell density decreased gradually from inside to outside in segment membrane. Occurrence of wax layer in the inside and morphological changes of cells under the wax layer emblematized the maturation of citrus segment membrane. For pomelo, the thickest segment membrane linked with the worst mastication was caused from a large number of cell layers, enlarged cell size and more pectin in segment membrane. At early fruit development from squaring stage to flower withering stage, the ventricles differentiated already in the ovary, and the intervals between ventricles would develop into segment membranes. In the period, parenchyma cells in the intervals exhibited equal cell size and arranged neatly, having no segment membrane characteristics. With fruit enlargement and maturation, the segment membranes of Shatian pomelo had the most cell layers and the longest cell wall thickening period. Segment membranes of Shatian pomelo showed significantly higher pectin content than that of Yuanfeng navel orange and Juxiangzao Satsuma mandarin. Segment membranes of Yuanfeng navel orange had medium cell layers and moderate cell wall thickening period, in which protopectin was higher than that of Juxiangzao Satsuma mandarin. The segment membranes of Juxiangzao exposed the least cell layers and the shortest cell wall thickening period. In October when Juxiangzao matured, segment membrane protopectins in Shatian pomelo, Yuanfeng navel orange and Juxiangzao Satsuma mandarin were 364.22, 208.48 and 165.39 mg·g-1, respectively, with Shatian pomelo reaching 74.7% and 120.2% higher than another two varieties. 【Conclusion】 Segment membrane thickness, cell layers in segment membrane and degree of cell wall thickening associated with citrus fruit mastication. Pectin content could reflect the mastication of citrus segment membranes.

    Genetic Analysis of Fruits Characters in Reciprocal Cross Progenies of Chinese Cherry
    LIU ZhenShan, TU HongXia, ZHOU JingTing, MA Yan, CHAI JiuFeng, WANG ZhiYi, YANG PengFei, YANG XiaoQin, Kumail Abbas, WANG Hao, WANG Yan, WANG XiaoRong
    Scientia Agricultura Sinica. 2023, 56(2):  345-356.  doi:10.3864/j.issn.0578-1752.2023.02.011
    Abstract ( 244 )   HTML ( 35 )   PDF (1130KB) ( 110 )   Save
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    【Objective】 The aim of this study was to pave the way for the construction of high-density genetic map and QTL (quantitative trait locus) analysis, so as to facilitate the parental selection and mating design in the breeding programs targeting for new varieties in Chinese cherry (Cerasus pseudocerasus (Lindl.) G.Don) by investigating and analyzing fruit traits of F1 progenies between Nanzaohong (NZH, early maturity, orange red) and Hongfei (HF, purple red, with good comprehensive characteristics). 【Method】 The heredity variation and inheritance tendency of 17 fruit quality traits in the F1 segregating populations (n=226) were investigated, which were derived from the reciprocal cross between NZH and HF These traits included fruit weight, longitudinal, transverse and lateral diameter, total soluble solids (TSS), soluble sugar (SS), titratable acid (TA), anthocyanin content, fruit shape index, fruit development period, and fruit stalk length, etc. 【Result】The average fruit weight in offspring of both NZH × HF (4.30 g; range: 2.59-7.46 g) and HF × NZH (4.05 g; range: 2.45-6.48 g) was smaller than the mid-parent value (4.58 g). The TSS content (14.55% and 14.51%) was higher than those of two parents (12.97% and 11.36%), and the ratio of individuals with TSS content higher than high parent(HH)was 78.52% and 76.09%. The average TA content of individuals from the reciprocal cross was lower than the low parent (LL) (47.92% and 41.94%). Peel color segregated in the F1 progenies, with orange red, red, purple red and black purple being observed. Hybrids with red fruit color accounted for the largest proportion. The anthocyanin content is in the range of 3.12-112.51 and 1.80-79.94 mg/kg. The average fruit development period of NZH × HF progenies was two days shorter than that of HF × NZH progenies, which was mainly affected by the male parent. The fruit stalk length showed heterosis with HH values of 49.25% and 43.33%, respectively. The mixed major gene and polygene inheritance model method was evaluated for their fitness relating to these traits. Two major genes plus polygenes model was the optimal genetic model for 11 (out of 12) quantitative traits except for the fruit longitudinal diameter, which was controlled by one major gene plus polygenes. 【Conclusion】The main fruit quality characteristics were quantitative traits controlled by polygenic loci. The inheritance trend of the fruit weight, longitudinal, transverse, lateral diameter, TA, and anthocyanin content tended to be decreased, while the TSS, SS content and fruit stalk length tended to be increased.

    FOOD SCIENCE AND ENGINEERING
    Inhibition and Interaction of Pleurotus eryngii Polysaccharide and Its Digestion Products on Starch Digestive Enzymes
    XU Qian, WANG Han, MA Sai, HU QiuHui, MA Ning, SU AnXiang, LI Chen, MA GaoXing
    Scientia Agricultura Sinica. 2023, 56(2):  357-367.  doi:10.3864/j.issn.0578-1752.2023.02.012
    Abstract ( 254 )   HTML ( 37 )   PDF (622KB) ( 92 )   Save
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    【Objective】In the present study, the investigation on the basic physicochemical properties of Pleurotus eryngii polysaccharide (PEP) and its related effects on diffusion and adsorption of glucose were conducted. PEP mimetic digestion products (D-PEP) were prepared using an in vitro stimulated digestion model to explore the effects of PEP and D-PEP on the digestive enzymes activities associated with glucose metabolism, as well as the interaction between PEP/D-PEP and α-glucosidase. 【Method】Firstly, the basic physicochemical properties of PEP were detected based on the methods in previous studies. Then the inhibitory effects of PEP/D-PEP on α-amylase and α-glucosidase activities were evaluated by DNS method and 4-Nitrophenyl α-D-glucopyranoside (PNPG) method, respectively. Finally, the relationship between PEP/D-PEP and α-glucosidase was studied with the utilization of the fluorescence spectroscopy technique. 【Result】 PEP displayed great potential on the solubility, swelling property, water and oil holding capacities, and favorable inhibition on glucose diffusion and adsorption. Moreover, PEP had obvious inhibitory effects on maltase and α-glucosidase, while it did not suppress the activity of α-amylase. Specifically, PEP with its concentration of 4 mg·mL-1 exhibited (77.20±2.71)% inhibition ratio on maltase activity, while (78.91±0.51)% inhibition ratio on α-glucosidase activity. However, the digestion product D-PEP showed significant inhibition on the activities of all these three enzymes, with 4 mg·mL-1 of D-PEP inhibiting α-amylase, maltase, and α-glucosidase by (84.08±1.79)%, (20.58±1.20)%, and (95.58±0.12)%, respectively. The outcomes of fluorescence spectroscopy showed that the endogenous fluorescence of α-glucosidase was gradually decreased along with the increasing of the PEP/D-PEP concentration, and the quenching of the endogenous fluorescence of α-glucosidase by PEP/D-PEP was mainly static quenching, with the number of binding sites greater than or equal to 1. 【Conclusion】In summary, D-PEP not only inhibited maltase and α-glucosidase activities but also showed great potential inhibition effects on α-amylase activity compared with PEP. Herein, D-PEP displayed stronger inhibitory effect on amylase and could be considered affect glucose metabolism to a certain degree.

    ANIMAL SCIENCE·VETERINARY SCIENCE
    Evaluation of Regulatory Effect of Guiqi Yimu Oral Liquid on Rumen of Postpartum Dairy Cows Based on UPLC-MS/MS Metabolomics Technology
    TANG YuLin, ZHANG Bo, REN Man, ZHANG RuiXue, QIN JunJie, ZHU Hao, GUO YanSheng
    Scientia Agricultura Sinica. 2023, 56(2):  368-378.  doi:10.3864/j.issn.0578-1752.2023.02.013
    Abstract ( 208 )   HTML ( 33 )   PDF (2777KB) ( 85 )   Save
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    【Background】Under the background of ban on antibiotics in animal feed at the current, the use of low residue, non-toxic Chinese herbal medicine preparations for perinatal health care has been favored by the majority of breeding enterprises. The previous studies found that Guiqi Yimu oral liquid could reduce inflammatory response, enhance immunity and relieve negative energy balance in postpartum cows, but the detailed mechanism of action was unclear. 【Objective】This study aimed to reveal the mechanism of action of Guiqi Yimu oral liquid from a new perspective through the regulatory effect of the prescription on rumen metabolism in postpartum cow with ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) metabolomics technology. 【Method】 18 healthy parturient Holstein cows with similar body condition and 2-3 parities were selected and averagely divided into the control group and the test group. From Day 0 to Day 6 after birth, the cows of test group were administrated Guiqi Yimu oral liquid, and those of control group were orally administrated water oral. Rumen fluids of all cows were collected at postpartum Day 0 before administration and postpartum Day 7 before first meal. After pretreatment, the metabolites in rumen were qualified and quantified with UPLC-MS/MS technology. The obtained data was imported into MetaboAnanlyst 5.0 software to perform principal component analysis (PCA) and orthogonal partial least squares discrimination analysis (OPLS-DA), investigating alteration in metabolic profiles of rumen fluids between the two groups, and screening differential metabolites for cluster and metabolic pathway enrichment analysis. 【Result】 The rumen metabolic profile of the test group was obvious different with the control group at postpartum Day 7 due to the concentrations of 43 rumen metabolites changed significantly (VIP>1, P<0.05). Compared wtih the control group, 8 metabolites were up-regulated (P<0.05), including 9-oxoODE, punicic acid, 6-dimethylaminopurine, L-proline, maleic acid, N-acetyl-5-hydroxytryptamine, pantothenol, and formononetin, and 35 metabolites were down-regulated in the test group (P<0.05), including organic acids and their derivatives, nucleotides and their metabolites, carbohydrates and their metabolites. Metabolic pathway enrichment analysis showed Guijiyimu oral liquid obviously altered rumen histidine metabolism, pentose and glucuronic acid mutual conversion, arginine and proline metabolism tryptophan metabolism, pyrimidine metabolism and purine metabolism pathways in postpartum dairy cows. 【Conclusion】 Guiqi Yimu oral liquid promoted the metabolic function of rumen flora in postpartum dairy cows, which was one of the mechanisms to alleviate the negative energy balance, enhance immunity, anti-inflammation and maintain intestinal homeostasis in postpartum dairy cows.

    Study on Milk Quality Based on Circadian Rhythm
    YANG GaiQing, WANG LinFeng, LI WenQing, ZHU HeShui, FU Tong, LIAN HongXia, ZHANG LiYang, TENG ZhanWei, ZHANG LiJie, REN Hong, XU XinYing, LIU XinHe, WEI YuXuan, GAO TengYun
    Scientia Agricultura Sinica. 2023, 56(2):  379-390.  doi:10.3864/j.issn.0578-1752.2023.02.014
    Abstract ( 212 )   HTML ( 31 )   PDF (1011KB) ( 97 )   Save
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    【Background】 Circadian rhythm is a common natural phenomenon undergoing in the biological world. With the change of day-night cycle, there are plenty of diverse reactions and changes taking place in living cells. So does it in animals, circadian rhythm affects the metabolism and physiological function inside the body, and further affects the growth, production, and reproductive of animals. Milk is the popular and near-perfect food in the world. On account of technological limitation, the knowledge on milk is just rested on the nutrition, ignored the physicochemical property and physiological function, especially physicochemical property and physiological function of day and night milk responding to circadian rhythm. 【Objective】 Through the research on the physical and chemical characteristics and physiological function of milk in day and night, it was proposed to collect milk according to the physiological function of milk in different periods, which could lay a theoretical basis for the classification, processing and scientific drinking of milk in day and night. 【Method】 This research collected night milk (5:00, produced from 21:00 to 5:00) and day milk (13:00, produced from 6:00 to 13:00) to detecte milk nutrients composition and fatty acids composition by lipidomics. The tiny molecular composition were investigatued by metabonomics and physicochemical properties antioxidation ability, such as superoxide dismutase (SOD), glutathione peroxidase (GSH-Px), gluathione reductase (GR), malondialdehyde (MDA), and metabolism related hormones, such as melatonin (MT), growth hormone (GH), triiodothyronine (T3), insulin (INS) and glucagon, as well as immune factors, such as immune globulin A (IgA), immune globulin G (IgG), tumor necrosis factor-α (TNF-α), interleukin-1β (IL-1β), interleukin-6 (IL-6), interferons-γ (IFN-γ), heat shock protein 70 (HSP70), heat shock protein 90 (HSP90) etc. 【Result】 The milk fat, protein, lactose, and total milk solids were not different between night milk and day milk, but the small molecules, metabolites, lipids, hormones and cytokines differed between day milk and night milk. Night milk was differ from day milk in physicochemical property, for antioxidant activity and immunity activity of night milk were significant high than that of day milk. The content of MT and IFN-γ in night milk were markedly higher than those in day milk, and the content of MDA, heat shock protein (HSP70, HSP90) were significantly increased. The result of metabolomics revealed that there were 36 differential metabolites were detected between night-milk and day-milk. Except 3 of them in night-milk were lower than that of day-milk, the rest 33 in night-milk were higher than that of day-milk. These metabolites were belonging to carbohydrate (such as dihydroxyacetone phosphate, D-glucose 6-phosphate, D-lactose, 2-ethoxyethanol, dihydroxyacetone, acetyl phosphate, acamprosate, alpha-D-glucose, D-galacturonic acid, raffinose, D-sorbitol, cis-aconitate, etc.), lipid (such as DL-α-hydroxybutyric acid, cis-9-palmitoleic acid, stearidonic acid, myristoleic acid, eicosapentaenoic acid, cholic acid, tridecylic acid, myo-inositol, DL-2-aminoadipic acid, etc.), amino acids (such as L-citrulline, D-ornithine, D-proline, taurine, N6-acetyl-L-lysine, N-acetylneuraminic acid, lys-leu, L-alanine, etc; N6-methyl-L-lysine, etc.) and other aromatic compounds (such as S-methyl-5'-thioadenosine, 2'-O-methylcytidine, 2'-deoxyuridine, etc.). Lipidomics analyses showed a total of 21 lipid classes and 1 094 lipid species were detected in the milk samples. The majority of the lipid species were TGs (379), accounts for 34%. These lipids included triglycerides (TG), phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylserine (PS), phosphatidylinositol (PI), sphingomyelin (SM), ceramide (Cer), O-acyl-ω-hydroxy fatty acid (OAHF), and diacylglycerol (DAG) categories. The composition of the lipids was very different between night milk and day milk. 【Conclusion】 Based on these differents, this research put forward a strategic method on milk classifying, processing, selling and drinking, in an attempt to meet the demands of people at different period and physiological status. This could make full use of the milk physiological property and better serve for human health at the time of providing nutrition and better serve the health of human beings.

    Effects of Melatonin and Nicotinamide Mononucleotides on Proliferation of Skeletal Muscle Satellite Cells in Goose
    SHEN LongXian, WANG LiTing, HE Ke, DU Xue, YAN FeiFei, CHEN WeiHu, LÜ YaoPing, WANG Han, ZHOU XiaoLong, ZHAO AYong
    Scientia Agricultura Sinica. 2023, 56(2):  391-404.  doi:10.3864/j.issn.0578-1752.2023.02.015
    Abstract ( 265 )   HTML ( 31 )   PDF (1593KB) ( 86 )   Save
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    【Background】 At present, the research on melatonin (MLT) is mostly focused on the reproductive function of poultry, and there is little research on the mechanism of action related to muscle development in poultry. At the same time, MLT and nicotinamide mononucleotide (NMN) have similar functions and are related to circadian rhythm. The previous study found that the single treatment of MLT and NMN had limited effect on cell senescence, while the effect of co-treatment was more significant, there are also related reports on the effects of skeletal muscle on mitochondrial function and skeletal muscle aging, but there is no report on the mechanism of skeletal muscle growth and development. 【Objective】 This study aimed to explore the molecular mechanism of MLT and NMN participating in the proliferation of skeletal muscle satellite cells of East Zhejiang White Goose. 【Method】 The goose skeletal muscle satellite cells were isolated and cultured by dissecting goose embryos, and the specific proteins Pax7 and Desmin of skeletal muscle satellite cells were subjected to immunofluorescence staining to identify cells. The cells were treated with 1 ng·mL-1 MLT and 1 μg·mL-1 NMN alone or in combination for 24 h in vitro mature culture, and then CCK-8 was used to detect the cell viability. In order to explore the clear mechanism of how MLT regulated the proliferation of goose skeletal muscle satellite cells, MLT receptor genes (MTNR1A, MTNR1B) were constructed, and then the cells were co-treated with 1 ng·mL-1 MLT, after that qRT-PCR and Western blot experiments were used to study whether overexpression of MTNR1A and MTNR1B affected the promotion of MLT on proliferation genes. In order to further explore the effects of MLT and NMN on the goose skeletal muscle satellite cell proliferation-related genes were detected by qRT-PCR and Western blot experiments to detect the expression changes of skeletal muscle cell proliferation-related genes. 【Result】 Pax7 and Desmin who were the specific marker proteins of skeletal muscle satellite cells were positive for green fluorescence in the nucleus and cytoplasm. The results showed that the cells used in the experiment were skeletal muscle satellite cells. The results of CCK-8 assay indicated that 1 ng·mL-1 MLT and 1 μg·mL-1 NMN could promote the activity of goose skeletal muscle satellite cells. The results of qRT-PCR and Western blot showed that compared with the control group, after overexpressed MLT receptor gene MTNR1A and MTNR1B, the mRNA and protein expressions of the proliferation marker gene Pax7 were significantly up-regulated (P<0.05), and the mRNA and protein expressions of the proliferation-inhibiting marker gene MSTN were significantly down-regulated (P<0.05). In addition, after co-treatment of goose skeletal muscle satellite cells with 1 ng·mL-1 MLT and 1 μg·mL-1 NMN, the mRNA and protein expressions of the proliferation marker gene Pax7 were significantly up-regulated (P<0.05), and the mRNA and protein expressions of the proliferation-inhibiting marker gene MSTN were significantly down-regulated (P<0.05), the change of which was more significant than that of NMN and MLT alone. 【Conclusion】 MLT promoted the proliferation of skeletal muscle satellite cells through its receptors, and the co-treatment of NMN and MLT could enhance the promoting effect of MLT on the proliferation of goose skeletal muscle satellite cells, and also provided a new idea for the application of MLT and NMN in the actual production of poultry.