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Table of Content

    01 February 2020, Volume 53 Issue 3
    CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS
    Functional Characterization of a Maize Plasma Membrane Intrinsic Protein ZmPIP2;6 Responses to Osmotic, Salt and Drought Stress
    ZHOU Lian,XIONG YuHan,HONG XiangDe,ZHOU Jing,LIU ChaoXian,WANG JiuGuang,WANG GuoQiang,CAI YiLin
    Scientia Agricultura Sinica. 2020, 53(3):  461-473.  doi:10.3864/j.issn.0578-1752.2020.03.001
    Abstract ( 616 )   HTML ( 126 )   PDF (4900KB) ( 457 )   Save
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    【Objective】Plasma membrane Intrinsic Proteins (PIPs) exist widely in the membrane system of plant cells, which are essential to water transport and water balance in plant. The aim of this study is to explore the function of ZmPIP2;6 in plant water stress tolerance, and provide potential gene resources for new varieties of stress tolerance maize breeding. 【Method】Amino acid sequences of ZmPIP2;6 was analyzed and compared with other PIPs that involved in water stress tolerance. To verify the subcellular localization of ZmPIP2;6, ZmPIP2;6-GFP infusion vector was constructed and assessed using maize protoplasts isolated from leaves of maize seedlings. Tissues from root, stem, mature leaf, immature tassel, immature ear, endosperm and embryo of maize were isolated. Samples from root and leaf of maize were collected at different time after PEG or NaCl treatment. Total RNA were extracted, and expression pattern of ZmPIP2;6 in different tissues or under water stress condition was investigated by qRT-PCR. Transgenic Arabidopsis plants that overexpressed ZmPIP2;6 were generated and identified. The phenotype of ZmPIP2;6 overexpression transgenic Arabidopsis that tolerated to osmotic, salt or drought stress were monitored and primary root length and leaf water loss rate were measured. A number of stress responsive genes in ZmPIP2;6 overexpression Arabidopsis were detected under drought or salt condition.【Result】Analysis and comparison of the amino acid sequences showed that ZmPIP2;6 shared the same conserved structural domains and had a high degree of sequence similarity with other PIPs. The subcellular localization was assessed using maize protoplasts indicated ZmPIP2;6 was located on the plasma membrane. qRT-PCR result showed that ZmPIP2;6 was highly expressed in tassel. Treatment with PEG or NaCl resulted in induced expression of ZmPIP2;6 in root and leaf of maize. Overexpression of ZmPIP2;6 in transgenic Arabidopsis showed enhanced osmotic and salt stress tolerance in MS media plate and improved drought stress tolerance in soil condition compared to wild type. Expressions of related genes in the stress signaling pathway were changed in ZmPIP2;6 overexpression Arabidopsis under drought or salt condition. 【Conclusion】 Expression of ZmPIP2;6 was up-regulated under osmotic or salt stress condition. Overexpression of ZmPIP2;6 in Arabidopsis enhanced osmotic, salt and drought stress tolerance. A number of stress responsive genes in ZmPIP2;6 overexpression Arabidopsis were affected under salt or drought stress condition. These results indicated that ZmPIP2;6 might be involved in plant water stress responsive pathway.

    Comprehensive Evaluation of Photoperiod Sensitivity Based on Different Traits of Broomcorn Millet
    WANG JunJie,WANG HaiGang,CAO XiaoNing,CHEN Ling,LIU SiChen,TIAN Xiang,QIN HuiBin,QIAO ZhiJun
    Scientia Agricultura Sinica. 2020, 53(3):  474-485.  doi:10.3864/j.issn.0578-1752.2020.03.002
    Abstract ( 378 )   HTML ( 25 )   PDF (933KB) ( 264 )   Save
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    【Objective】The objective of this study is to investigate the photoperiod response characteristics of broomcorn millet of eight main agronomic traits, including heading period, plant height, panicle length, aboveground fresh weight, number of leaves, number of nodes, flag leaf area and 1000-grain weight, and to screen for the suitable traits for broomcorn millet photoperiod sensitivity evaluation by pot shading and field planting modes in two different photoperiod ecological regions.【Method】The photoperiod relative sensitivity and D value of comprehensive evaluation index of photoperiod sensitivity were established based on data values of eight traits in field and pot planting, and the photoperiod sensitivity of broomcorn millet was comprehensively evaluated by two methods.【Result】The result of variance analysis showed that eight traits of broomcorn millet were significant difference under different photoperiod treatments. The performance values of each agronomic trait in pot under long sunshine of sixteen hours were significantly higher than those in short sunshine of eight hours, and the performance values of each agronomic trait in Dingxiang area were significantly higher than those in Sanya area. It was found that photoperiod relative sensitivity of aboveground fresh weight was the highest in both pot and field planting, while the 1000-grain weight was the lowest. Correlation analysis showed that plant height, panicle length, aboveground fresh weight, flag leaf area, number of nodes and number of leaves had extremely significant correlated with the D value, the 1000-grain weight had positively correlated with D value, and heading period had no significant negative correlation with D value in pot. All the traits were positively significant correlated with the D value except 1000-grain weight in field planting. The top three in the simple correlation coefficients of each agronomic character and photoperiod sensitivity comprehensive index D in the field were plant height (0.867), aboveground fresh weight(0.811) and panicle length (0.784). Potted plants were height (0.787), panicle length (0.687) and aboveground fresh weight (0.677). The formula to calculate the photoperiod sensitivity comprehensive index D in pot was Y=0.048+0.012X1+0.063X2+0.0446X3+0.053X4+0.036X5+ 0.016X6+0.024X7-0.011X8, and the formula to calculate the photoperiod sensitivity comprehensive index D in field was Y=0.019+ 0.034X1+0.094X2+0.066X3+0.080X4+0.057X5+0.028X6+0.011X7+0.139X8, in which X1, X2, X3, X4, X5, X6, X7 and X8 represented heading period, plant height, panicle length, number of leaves, number of nodes, flag leaf area, aboveground fresh weight and 1000-grain weight respectively. Regression and path analysis showed that potted and field fresh weight and plant height had the largest direct effect on the comprehensive photoperiod sensitive index D, which were 0.383, 0.300 and 0.251, 0.250 respectively, followed by flag leaf area and panicle length, which were 0.295, 0.276 and 0.238, 0.249 respectively. By comparing and analyzing the results of pot and field planting between photoperiod relative sensitivity and comprehensive evaluation index D value, we found that aboveground fresh weight and plant height showed strong photoperiod sensitivity, followed by panicle length and flag leaf area, on the contrary, 1000-grain weight and heading period had weak photoperiod sensitivity.【Conclusion】Aboveground fresh weight and plant height can be used as main evaluation indexes for the photoperiod sensitivity of broomcorn millet, and flag leaf area and panicle length can be used as the reference evaluation indexes, while 1000-grain weight and heading period are not suitable for the evaluation indexes for the photoperiod sensitivity.

    TILLAGE & CULTIVATION·PHYSIOLOGY & BIOCHEMISTRY·AGRICULTURE INFORMATION TECHNOLOGY
    A Meta-Analysis of the Effects of Nitrogen Application Rates on Yield and Water Use Efficiency of Winter Wheat in Dryland of Loess Plateau
    MA DengKe,YIN LiNa,LIU YiJian,YANG WenJia,DENG XiPing,WANG ShiWen
    Scientia Agricultura Sinica. 2020, 53(3):  486-499.  doi:10.3864/j.issn.0578-1752.2020.03.003
    Abstract ( 523 )   HTML ( 47 )   PDF (1381KB) ( 622 )   Save
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    【Objective】 The objective of this study was to clarify the effects of nitrogen fertilizer (N) on winter wheat yield and the optimum N level under different planting conditions in the Loess Plateau.【Method】A total of 82 field studies were obtained through literature retrieval. The effects of N on yield and water use efficiency of winter wheat in different regions, annual mean temperature, annual precipitation and plough layer organic matter content in the Loess Plateau were compared by meta-analysis. Regression analysis was used to explore the relationship between yield and N application rate, water use efficiency and N application rate in each group. 【Result】 Compared with no N application, N application improved the yield and water use efficiency of winter wheat in the Loess Plateau by 66.09% and 72.38%, respectively (P<0.05). The effect of N on yield was more prominent in the northwest than that in the southeast, and the effect of N on water use efficiency was more prominent in the southeast than in northwest. The yield of northwest reached the highest when the N application rate was 212 kg·hm -2, and the highest yield could be obtained by applying another 15 kg N·hm -2in southeast. The water use efficiency reached maximum at 232 kg N·hm -2 in northwest, while at 224 kg·hm -2 in southeast. The effects of N on yield and water use efficiency of winter wheat were more prominent in areas with average annual temperature ≤10℃. At the area of average temperature >10℃, yield and water use efficiency reached the maximum when N rates were 189 kg·hm -2 and 187 kg·hm -2, respectively. However, at the area of average temperature ≤10℃, yield and water use efficiency reached the maximum when N rates were 225 kg·hm -2 and 239 kg·hm -2, respectively. The effect of N on yield was prominent in areas of annual average precipitation ≤ 600 mm, while the change rate of water use efficiency was prominent in areas with annual precipitation >600 mm. The yield and water use efficiency reached the highest at 235 kg N·hm -2 and 244 kg N·hm -2 application rates in areas with annual precipitation <600 mm, while 235 kg·hm -2 and 250 kg·hm -2 in the area with annual precipitation >600 mm. The effect of N on yield and water use efficiency was prominent when the organic matter content in plough layer was ≤12 g·kg -1. Under the condition of topsoil organic matter >12 g·kg -1, the yield and water use efficiency tended to be highest when the N application rates were 163 kg·hm -2 and 175 kg·hm -2. The optimum N application rate was 226 kg·hm -2 when the topsoil organic matter content ≤12 g·kg -1.【Conclusion】 The optimum N application rates for high yield of winter wheat in the southeast and northwest were 227 kg·hm -2 and 212 kg·hm -2, respectively. The optimum N application rate was 188 kg·hm -2 in the area with average annual temperature >10℃, and 225 kg·hm -2 when average annual temperature ≤10℃. In the area with annual average precipitation >600 mm, the optimum N application rate was 250 kg·hm -2, and 235 kg·hm -2 when annual average precipitation ≤600 mm. The optimum N application rate was 226 kg·hm -2 under the topsoil organic matter content ≤12 g·kg -1, and 163 kg·hm -2 when the topsoil organic matter content >12 g·kg -1.

    Mechanism of Spraying Growth Regulators to Alleviate Drought Stress of Sweet Potato
    WANG JinQiang,LI SiPing,LIU Qing,LI Huan
    Scientia Agricultura Sinica. 2020, 53(3):  500-512.  doi:10.3864/j.issn.0578-1752.2020.03.004
    Abstract ( 430 )   HTML ( 33 )   PDF (1103KB) ( 537 )   Save
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    【Objective】The study was conducted to investigate the effects of spraying growth regulators on the distribution of photosynthetic products in sweet potato and the alleviation effects on drought stress.【Method】Artificial dry shed and dry pond were used to simulate the drought stress of potato swell (100-120 d), and based on 13C labeling method, the alleviation effects of spraying three exogenous hormones such as 6-benzylaminopurine (6-BA), α-naphthyl acetic acid (NAA) and abscisic acid (ABA) on drought stress of sweet potato were studied. The physiological and biochemical indexes, such as the accumulation and distribution rate of 13C, endogenous hormone content, carbon metabolism enzyme activity and photosynthetic fluorescence characteristics of sweet potato leaves, were analyzed. And then we performed stepwise regression analysis, path analysis and RDA analysis.【Result】Compared with normal water supply, drought stress decreased the yield of sweet potato by 18.76% (P<0.05). The degree of the decrease of yield was greatly smaller with the spraying of growth regulator under drought stress (P<0.05). The best effect of spraying was 6-BA which was followed by ABA and NAA. Spraying growth regulators under drought stress could significantly improve the photosynthetic efficiency of functional leaves, which could promote the synthesis of photosynthetic products during the expansion of potato tubers. Compared with the spraying of water, the spraying of 6-BA promoted the net photosynthetic rate (Pn), which increased by 10.93% and the maximum photochemical efficiency (Fv/Fm) which increased by 20.00%. Spraying different growth regulators in drought could significantly increase the instantaneous accumulation of 13C and the rate of distribution to the roots of sweet potato. Different growth regulators could promote the transfer of photosynthetic products ( 13C) from leaves to roots and distribution which increased by 75.68% and 27.68% by spraying 6-BA, respectively. In addition, spraying growth regulators increased leaf carbon metabolizing enzyme activity. Compared with the spraying of water, the spraying of 6-BA, NAA and ABA increased SS enzyme activity increased by 29.59%, 19.25% and 13.03%, respectively. Spraying growth regulators alleviated the decrease of ZR and IAA content caused by drought. Compared with the spraying of water, the spraying of 6-BA increased ZR and IAA by 18.72% and 10.97%, respectively. Stepwise regression analysis showed that photosynthetic characteristics, chlorophyll fluorescence characteristics, carbon metabolism enzyme activity and endogenous hormones were key indicators for regulating the distribution of photosynthetic products ( 13C) at the peak of potato tube expansion (R=0.997); Path analysis showed that Pn, SPS, ABA, ZR, SS and Fv/Fm had the higher direct interaction coefficient on the transfer and distribution of the product ( 13C) from the leaves to the roots for sweet potato photosynthesis; RDA analysis showed that the spraying of 6-BA had a good correlation with the total 13C accumulation of sweet potato, the distribution of 13C in roots, ZR, Pn, Fv/Fm, SS and SPS.【Conclusion】Spraying growth regulators under drought stress raised endogenous hormone content, carbon metabolism enzyme activity based on SPS and ADPGase, improved leaf photosynthetic characteristics, and promoted the transport of photosynthetic products ( 13C) from leaf to root in potato tube expansion stage, besides which could relieve the effects of drought stress.

    Effect of MCPA on Leaf Senescence and Endogenous Hormones Content in Leaves of Foxtail Millet Seedlings
    GUO MeiJun,BAI YaQing,GAO Peng,SHEN Jie,DONG ShuQi,YUAN XiangYang,GUO PingYi
    Scientia Agricultura Sinica. 2020, 53(3):  513-526.  doi:10.3864/j.issn.0578-1752.2020.03.005
    Abstract ( 365 )   HTML ( 29 )   PDF (2358KB) ( 436 )   Save
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    【Objective】The objective of the experiment was to investigate the effect of MCPA on the senescence characteristics of leaves and contents of endogenous hormones in leaves of foxtail millet, and explore the physiological response of foxtail millet seedlings to MCPA stress, which provided a theoretical basis for the mechanism of herbicide resistance and the safe use of herbicide during cultivation.【Method】A pot-grown experiment was conducted with Jingu 21 and Zhangza10 as materials with four dosages (0.75, 1.50, 3.00, 6.00 kg·hm -2) of MCPA. After treatment for the 5 d and 15 d, the plant height, leaf area, chlorophyll content, photosynthetic parameters, chlorophyll fluorescence parameters, malondialdehyde (MDA) content, superoxide dismutase (SOD), peroxidase (POD), catalase (CAT) activity and endogenous hormone content of foxtail millet were determined. In addition, the correlation between endogenous hormone content and photosynthetic characteristics and antioxidant enzyme activity under MCPA stress were analyzed.【Result】Compared with the control, the chlorophyll content, net photosynthetic rate (Pn), transpiration rate (Tr), stomatal conductance (Gs), PSⅡ maximum photochemical efficiency (Fv/Fm), and electron transfer rate (ETR) in foxtail millet leaves were decreased with different MCPA dosages treatment; however, the change tendency of non - photochemical quenching (NPQ) is opposite. In addition, the effect of MCPA on the photosynthetic characteristics of foxtail millet gradually decreased with the extension of application time, which showed that most indexes could be restored to the control level after MCPA treatment 15 d. At the same time, SOD, POD, CAT activity and MDA content of foxtail millet leaves were increased with MCPA treatment at different dosages, which showed the trend of increasing first and then decreasing with the extension of application time. MCPA treatment increased abscisic acid (ABA) and auxin (IAA) content in foxtail millet leaves and decreased gibberellin (GA) and zeatin (Zt) content in foxtail millet leaves. ABA content was significantly negatively correlated with chlorophyll content, Pn, Fo and ETR, and significantly negatively correlated with Gs. Except NPQ, Zt content was significantly positively correlated with chlorophyll content and ETR, and significantly positively correlated with Fo. Correlation analysis showed that ABA content was significantly correlated with the activity of SOD and POD. IAA content was positively correlated with CAT. GA content was significantly correlated with POD activity.【Conclusion】 After MCPA treatment, Zt content was increased and ABA content was decreased in foxtail millet leaves. On the one hand, MCPA affected photosynthetic rate, photoelectron transfer and other photosynthetic physiological processes; while, MCPA regulated endogenous hormone contents including IAA, GA and ABA, which further influence the activity of SOD, POD and CAT and eventually leaded to enhance the tolerance to herbicide stress.

    PLANT PROTECTION
    Establishment and Application of a Multiple PCR Method to Detect Mating Types of Exserohilum turcicum and Bipolaris maydis
    DAI YuLi,GAN Lin,TENG ZhenYong,YANG JingMin,QI YueYue,SHI NiuNiu,CHEN FuRu,YANG XiuJuan
    Scientia Agricultura Sinica. 2020, 53(3):  527-538.  doi:10.3864/j.issn.0578-1752.2020.03.006
    Abstract ( 373 )   HTML ( 21 )   PDF (3975KB) ( 378 )   Save
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    【Objective】 Northern corn leaf blight (NCLB) and southern corn leaf blight (SCLB), caused by Exserohilum turcicum and Bipolaris maydis, respectively, are the most important foliar fungal diseases affecting maize production. The objective of this study is to establish a multiple PCR method to detect mating types of E. turcicum and B. maydis, and to provide a technical method for the study of mating type distribution in the field and sexual reproduction of E. turcicum and B. maydis. 【Method】 Mating type-specific primers for the two pathogens were designed on the basis of mating type gene sequences of E. turcicum (accession numbers: GU997138 for MAT1-1; GU997137 for MAT1-2) and B. maydis (accession numbers: X68399 for MAT1-1; X68398 for MAT1-2) obtained from GenBank, and the important parameters of primer annealing temperatures, extension times and amplification cycles in the amplification program were optimized using the single factor method. A multiple PCR method was established to detect mating types of E. turcicum and B. maydis, and the sensitivity and specificity of the multiple PCR were also assessed. Meanwhile, the mating types of 129 strains of E. turcicum and 194 strains of B. maydis from field-collections were detected by the multiple PCR to determine the adaptability of the established method.【Result】The expected 816, 132 bp (E. turcicum), and 490, 136 bp (B. maydis) target fragments were amplified specifically using the multiple PCR with mating type-specific primers of StMAT01-2F/R, StMAT02-3F/R, and ChMAT01-3F/R, ChMAT02-2F/R from MAT1-1 and MAT1-2 strains, respectively. A 25 μL PCR reaction system consisted of 12.5 μL 2×Multiplex PCR Mix, 10 pmol each primer, and 100 ng DNA template. The annealing temperatures for E. turcicum and B. maydis were 57.2℃ and 55.0℃, respectively, and the number of amplification cycles was 35. The multiple PCR method could reliably detect mating types of E. turcicum at 0.1 ng genomic DNA for MAT1-1 or 0.01 ng DNA for MAT1-2 from single-spore strains, while the sensitivity of the multiple PCR to detect mating types of B. maydis was 0.1 ng genomic DNA for both MAT1-1 and MAT1-2 from pure culture strains. The method exhibited specificity in differentiating mating types of E. turcicum and B. maydis from their closely-related species, as well as 14 other fungal genera. The results of mating types detection of E. turcicum and B. maydis strains from different geographical origins indicated that the multiple PCR could reliably detect mating types of 129 and 194 strains of E. turcicum and B. maydis, respectively. These results were consistent with the verification results of laboratorial cross assays with random selected strains from different locations.【Conclusion】The established multiple PCR method for mating types detection of E. turcicum and B. maydis in this study was characterized as high sensitivity, specificity and user-friendly control, it could accurately and rapidly detect mating types of E. turcicum and B. maydis. This study provides a reliable technique and approach for the study of distribution and monitoring of mating types in the field and sexual reproduction of E. turcicum and B. maydis.

    Occurrence and Biological Characteristics of Tomato mottle mosaic virus on Solanaceae Crops in China
    LI YueYue,ZHOU WenPeng,LU SiQian,CHEN DeRong,DAI JianHong,GUO QiaoYou,LIU Yong,LI Fan,TAN GuanLin
    Scientia Agricultura Sinica. 2020, 53(3):  539-550.  doi:10.3864/j.issn.0578-1752.2020.03.007
    Abstract ( 518 )   HTML ( 23 )   PDF (2797KB) ( 370 )   Save
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    【Objective】The objective of this study is to determine the occurrence, main distribution area, natural host and biological characteristics including host range, transmission way and pathogenicity of Tomato mottle mosaic virus (ToMMV) in solanaceae crops of China, which is a newly identified species in the genus Tobamovirus.【Method】Using RT-PCR method, the suspected virus-infected pepper, tomato, eggplant, potato, tobacco of solanaceae crops showing mosaic, shrinking, malformation, yellowing, necrosis symptoms collected from 13 provinces/autonomous regions (Yunnan, Guizhou, Sichuan, Hainan, Hunan, Henan, Shaanxi, Shandong, Hubei, Zhejiang, Liaoning, Tibet and Inner Mongolia) of China in 2013-2017 were detected. Transmission ways were tested by mechanical inoculation and injection, by ToMMV detection in the seeds obtained from ToMMV-infecting tobacco and the seedlings germinated from the seeds, as well as in the 6-8 leaves seedlings of pepper and tomato germinated from the healthy seeds grew in the ToMMV-contaminated soils. Host range test of ToMMV on 30 plants in 6 families such as Solanaceae, Cucurbitaceae, Leguminosae, Cruciferae and disease resistance evaluation of different pepper and tomato varieties against ToMMV were carried out.【Result】A total of 1 622 suspected virus-diseased samples of solanaceae crops were collected from 13 provinces/autonomous regions, and the average detection rate of ToMMV was 2.59%, which occurred in 7 provinces/autonomous regions including Yunnan, Hunan, Hainan, Liaoning, Shaanxi, Tibet and Inner Mongolia. ToMMV infection in pepper was detected in Yunnan, Hunan, Hainan, Shaanxi and Tibet, while the infection of ToMMV in tomato was detected in Yunnan, Hainan, Liaoning and Inner Mongolia, with the average detection rates of 2.51% and 3.46%, respectively. No ToMMV was detected in eggplant, potato and tobacco. ToMMV could be transmitted by mechanical inoculation, injection, virus-contaminated seeds and virus-contaminated soils under experimental conditions, and showed the higher ToMMV infection rate in the seeds, the greater impact on the growth of seedlings. ToMMV could infect almost all of the tested solanaceae and cruciferae plants, and some leguminosae and cucurbitaceae plants. One pepper germplasm material was identified as immune to ToMMV, and two pepper germplasm materials were high resistance to ToMMV, while two tomato germplasm materials showed high resistance to ToMMV.【Conclusion】ToMMV has been occurring on pepper and tomato in China at present, and the host range of ToMMV is wide and the pathogenicity is strong under experimental conditions. ToMMV has a gradual spread and epidemic trend in China, and it is likely to become one of the most harmful viruses on vegetable crop production, especially in solanaceae crops in the future.

    The Occurrence Trends of Dominant Species of Potato Viruses and Thrips in Yunnan Province
    DU Xia,WU Kuo,LIU Xia,ZHANG LiZhen,SU XiaoXia,ZHANG HongRui,ZHANG ZhongKai,HU XianQi,DONG JiaHong,YANG YanLi,GAO YuLin
    Scientia Agricultura Sinica. 2020, 53(3):  551-562.  doi:10.3864/j.issn.0578-1752.2020.03.008
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    【Objective】The objective of this study is to identify the dominant species of potato and changes of potato new virus in Yunnan Province, provide early warning and monitoring for the production of potato seedling, and to provide a basis for preventing the outbreak of new viral diseases.【Method】Using random five-point sampling method, a total of 510 leaves of local public potato varieties were collected from different fields in the spring and winter cropping areas of Yunnan. The viruses were detected by double antibody sandwich enzyme linked immunosorbent assay (DAS-ELISA) and indirect enzyme linked immunosorbent assay (I-ELISA). The same method was used to collect thrips from flowers and leaves of the local public potato varieties from spring and winter potato cropping areas in Yunnan. The samples were put into the collection tank and brought back to the laboratory. A total of 8 953 thrips were collected and made slide specimen. The species of thrips were identified by the morphological characteristics based on Oz thrips (http://www.ozthrips.org/) and key list of Thrips genus in China.【Result】A total of 6 common and 2 emerging viruses were detected from 510 potato samples. The dominant potato virus was Potato virus S (PVS), with an incidence rate of 63.53%, followed by Potato virus X (PVX) and Potato leafroll virus (PLRV). The two emerging potato viruses Tomato spotted wilt virus (TSWV) and Tomato zonate spot virus (TZSV) were detected, with incidence rates of 5.10% and 15.10%, respectively. A total of 3 families, 5 genera and 13 species of thrips were identified in this survey. They were Thrips flavidulus, T. flavus, T. palmi, T. tabaci, T. hawaiiensis, T. coloratus, T. obscuripes, T. alliorum, Frankliniella occidentalis, F. intonsa, Taeniothrips major of Thripidae, Haplothrips sp. of Phlaeothripidae, and Aeolothrips sp. of Aeolothripidae. Among the 8 detected viruses, only TSWV and TZSV could be transmitted by thrips. F. occidentalis was the dominant species in the potential virus-transmission thrips population, accounting for 69.47% of the total potential virus-transmission thrips population. 【Conclusion】At present, PVS is the dominant potato virus in Yunnan, and the incidence rate of two emerging viruses infecting potato is also increasing. F. occidentalis is the dominant species in the potential virus-transmission thrips population.

    SOIL & FERTILIZER·WATER-SAVING IRRIGATION·AGROECOLOGY & ENVIRONMENT
    Digital Soil Properties Mapping by Ensembling Soil-Environment Relationship and Machine Learning in Arid Regions
    ZHANG ZhenHua,DING JianLi,WANG JingZhe,GE XiangYu,WANG JinJie,TIAN MeiLing,ZHAO QiDong
    Scientia Agricultura Sinica. 2020, 53(3):  563-573.  doi:10.3864/j.issn.0578-1752.2020.03.009
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    【Objective】The spatial distribution of soil properties is an important factor affecting agricultural productivity, land management and ecological security. Utilizing the coupling relationship between soil and environment within framework of machine learning algorithm, the spatial distribution of soil pH, soil salt content (SSC) and soil organic matter (SOM) was quantitatively predicted to provide a scientific basis on ecological security and agricultural production in the arid region. 【Method】A total of 82 topsoil (0-20 cm) samples were collected from the Ugan-Kuqa River basin oasis in Xinjiang Uyghur Autonomous Region in July 2017. Furthermore, Digital elevation model (DEM) data and Landsat 8 data were used to extract 32 environmental covariates according to the soil-environment relationship. The 32 extracted variables were resampled to 90 m spatial resolution via raster resampling and were converted to grid format for participate in modeling. According to the importance of environmental covariates, they were ranked respectively using Gradient Boosting Decision Tree (GBDT) algorithm on the three soil attributes. We considered three strategies to estimate soil properties, including random forest, bagging and Cubist algorithm. Compared with non-linear models, we introduced classic linear model (MLR) to conduct optimization. On this foundation, we mapped the soil properties (pH, SSC and SOM) with a resolution of 90 m in the Ugan-Kuqa River basin oasis, respectively.【Result】The results showed that GBDT could screen out important covariates effectively. Elevation and Profile Curvature, Difference Vegetation Index, Extended Normalized Difference Vegetation Index, Modified Soil Adjusted Vegetation Index and Salinity Index S1 and Salinity Index S6 were important factors and involved in modeling of three kinds of soil properties, among which SSC selects 15 covariates to participate in modeling, pH and SOM were both 17. Remote sensing index played a significant role in predicting soil property maps. Non-linear models showed more accuracy than MLR as linear model. Random forest performed best in all three soil properties. Among the three soil properties predicted by random forest, the validation dataset of soil pH, SSC and SOM were R 2=0.6779, RMSE=0.2182, ρc=0.6084, R 2=0.7945, RMSE=3.1803, ρc=0.8377 and R 2=0.7472, RMSE=3.5456, ρc=0.7009, respectively. 【Conclusion】 The importance factors selected by GBDT and machine learning algorithm could be used to mapping soil properties in arid areas. The random forest strategy showed the best predictive ability for soil properties. The spatial distribution of mapping three properties could be determined by combining with soil classification map.

    Effects of Conditioning Agents and Agronomic Measures on Cadmium Uptake by Rice in Polluted Rice Fields
    PENG Ou,LIU YuLing,TIE BaiQing,YE ChangCheng,ZHANG Miao,LI YuanXingLu,ZHOU JunChi,XU Meng,ZHANG Yan,LONG Yong
    Scientia Agricultura Sinica. 2020, 53(3):  574-584.  doi:10.3864/j.issn.0578-1752.2020.03.010
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    【Objective】How to safely use cadmium (Cd) to prevent it from contaminating cultivated land to produce up to standard rice is a hot topic for scholars. This paper mainly explored the effects of water management, conditioning agent measures and combined measures on the Cd reduction of rice in polluted rice fields. It aimed to reduce the bioavailability of soil Cd and the Cd content in rice under the premise of not significantly reducing rice yield【Method】Field rice experiments were carried out in a moderately Cd-contaminated paddy field in Zhuzhou City, Hunan Province, through a field plot test. In the experiment, rice was planted for two seasons. The early rice variety was Zhongjiazao17, and the late rice variety was Taiyou390. The test setup design was divided into 6 groups, namely water management treatment (T2), application of silicon fertilizer treatment (T3), application of bamboo charcoal treatment (T4), application of silicon fertilizer combined with water management treatment (T5), application of bamboo charcoal combined with water management treatment (T6), and control (T1), and each treatment was repeated 3 times.【Result】The effective Cd content in the paddy soil was reduced by the treatments. The bamboo charcoal combined with water management treatment (T6) significantly reduced the soil moisture in the two rice grow seasons. The silicon fertilizer combined with water management treatment (T5) had the largest reduction of available cadmium in the late rice soil. The treatments all had the effect of reducing the Cd content in all parts of rice. In the aspect of cadmium content of brown rice, the reduction of Cd content in brown rice in the five experimental treatments was the best in combination with the repair technology, namely silicon fertilizer combined with water management treatment (T5). Combined with carbon and water management (T6), in the water management and repair technology, the water management in the whole growth period has the best Cd effect, the highest reduction was 29.23%; in the application of conditioning agent repair technology, silicon fertilizer treatment (T3) and bamboo charcoal treatment (T4) significantly reduced rice husks and brown rice (P<0.05). Under the silicon fertilizer treatment (T3), brown rice had the highest Cd amplitude of 49.23%; under the bamboo charcoal treatment (T4), brown rice had the highest Cd amplitude of 47.69%. In the treatment technology, the Cd content of rice brown rice could be significantly reduced. The silicon fertilizer combined with water management treatment (T5) of brown rice decreased Cd range from 60.34% to 78.46%, and bamboo charcoal combined with water management (T6) brown rice decreased Cd range from 56.90% to 67.69%. At the same time, this paper analyzed the correlation between soil available cadmium content and cadmium content in various parts of rice, and found that there was very significant positive correlation between rice grain (rice husk and brown rice) and soil available cadmium content (P<0.01), and two rice varieties were consistent. The treatments also had the effect of reducing the enrichment coefficient of various parts of rice, and the best results were obtained by silicon fertilizer combined with water management treatment (T5) and carbon combined water management (T6). Regarding the effect of reducing the rice-to-grain transfer coefficients from different parts of the rice, the rules were inconsistent, but the transfer coefficients of the stalk sheaths and leaves to the grains (rice hulls and brown rice) were significantly reduced, except for water management (T2) treatment. In terms of rice yield, only water management treatment (T2) significantly reduced yield of Zhongjiazao17, and the other treatments did not decrease significantly. Each treatment had no significant effect on Taiyou390.【Conclusion】The combination measures were better than single water management or single conditioner treatment, and the maximum Cd drop in rice Cd-contaminated rice fields reached 78.46% when rice yield was not significantly reduced, which could further ensure the safe use of Cd-contaminated farmland.

    HORTICULTURE
    Seed Traits and Seedling Performances of Different Types of Citrus Rootstock
    ZHU ShiPing,WANG FuSheng,CHEN Jiao,YU Xin,YU Hong,LUO GuoTao,HU Zhou,FENG JinYing,ZHAO XiaoChun,HONG QiBin
    Scientia Agricultura Sinica. 2020, 53(3):  585-599.  doi:10.3864/j.issn.0578-1752.2020.03.011
    Abstract ( 370 )   HTML ( 13 )   PDF (7570KB) ( 312 )   Save
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    【Objective】Good rootstock could promote plant growth, improve fruit yield and quality, and enhance stress tolerance and adaptability. Currently in China, mixed genotype of seeds is generally used for propagation of nursery trees. Variable germination, growth, and stress tolerance of seedlings are the common problems significantly affecting the quality of nursery trees, also the performance of orchard plants. This research was aimed to study the key parameters related to the quality of seedlings in different genotypes of rootstocks, to establish the standards for evaluation of rootstock and provide guidelines for selection of superior rootstock. 【Method】 104 different citrus rootstock germplasm accessions were evaluated in five consecutive years on their seed characteristics, such as seed number per fruit, plumpness of seeds, 1 000-grain weight, embryonic type, and the seedling performances, such as germination rate, occurrence of etiolation and blight, and the growth vigor. The uniformity of the seedlings of some rootstock accessions were identified by COS (Conserved Ortholog Sequences) markers. Association of MITE (Miniature inverted-repeat transposable element) insertion with embryonic type was also investigated in some rootstock accessions. 【Result】 (1) Fruits of Poncirus and its hybrids, as well as Citrus junos accessions were highly multi-seeded and multi-seeded. Most of the seeds were plumpy, polyembryonic and mixed-embryonic type. The 1000-grain weight of most accessions was more than 200 g. The seed numbers per fruit in mandarins were highly variable in the range of low-seeded, multi-seeded and highly multi-seeded. Most seeds were medium plumpy and polyembryonic. The 1 000-grain weight in approximately half of the mandarin accessions was less than 100 g. (2) Seedling performances differed among different types of rootstocks. C. junos demonstrated the highest frequency of germination, and lower etiolation rate, but the seedlings were sensitive to blight disease. The germination rates of Poncirus and its hybrids were lower than that of C. junos, but the etiolation rate was higher. Their seedlings were tolerant to blight disease. The germination rates of most mandarin accessions were comparatively low, and the rates of both etiolation and blight were also low. Comparisons of seedling growth at 10 months after sowing, Poncirus showed the strongest growth vigor, followed by its hybrids and C. junos, while those of mandarins were the least measured by both seedling height and stem diameter. (3) Correlation analysis revealed that except for the occurrences of etiolation and blight, parameters between the traits of seeds and seedlings such as seeds per fruit, 1000-grain weight, plumpness, the mono-embryo rate, poly-embryo rate, embryonic type, the height and the stem diameter of seedlings were tightly correlated at the levels of high significance (P<0.01) or significance (P<0.05). The contribution of each individual parameter to the overall variation was highly different. PCA (principle component analysis) could clearly distinguish the genetic differences between the different types of rootstocks. The coefficient variations of the parameters except for etiolation rate were not significantly variable among different years, indicating those traits were comparatively stable. (4) Results of COS marker showed that mono-embryonic seedlings of mandarin were less uniform than that of mono-embyonic seedlings of Poncirus and all the poly-embryonic and mixed-embyonic accessions. MITE insertion was detected in polyembryonic accessions of mandarin, C. junos and Poncirus hybrids, but did not in monoembryonic accessions of mandarin and pummelo. However, MITE insertion did not observed either in monoembryonic or polyembryonic accessions of some Poncirus. 【Conclusion】Parameters between seed traits and seedling performances were highly correlated. These results indicated that the high quality of seedling was greatly associated with good characters of seed. Measured by overall performance, the characters of both seeds and seedlings of Poncirus were the best, followed by Poncirus hybrids and C. junos, those of mandarins were the worst.

    Genetic Diversity and Phylogenetics of Malus baccata (L.) Borkh Revealed by Chloroplast DNA Variation
    GAO Yuan,WANG DaJiang,WANG Kun,CONG PeiHua,ZHANG CaiXia,LI LianWen,PIAO JiCheng
    Scientia Agricultura Sinica. 2020, 53(3):  600-611.  doi:10.3864/j.issn.0578-1752.2020.03.012
    Abstract ( 354 )   HTML ( 10 )   PDF (698KB) ( 276 )   Save
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    【Objective】Malus baccata (L.) Borkh is the most widely distributed native species in China. The non-coding region of chloroplast genome by maternal inheritance is suitable for the systematic study of lower taxonomic levels (such as families and genera). The non-coding regions of cpDNA of 215 germplasms were sequenced, and their genetic variation was analyzed. In this study, the genetic diversity of Malus baccata and the phylogenetic relationship among different populations were explored from the perspective of maternal inheritance, which provided a theoretical basis for origin and genetic evolution, collection and protection of Malus baccata germplasm resources in China.【Method】Four non-coding regions (trnH-psbA, trnS-trnG spacer + intron, trnT-5'trnL and 5'trnL-trnF) of 215 germplasms were amplified by four primers. After manually proofreading sequences obtained through forward and backward sequencing, MEGA 7.0 was used for sequence splicing and alignment, and based on genetic distance, the Neighbour-Joining phylogenetic tree was constructed among different populations of Malus baccata. DnaSP ver5.10.01 was used to calculate the genetic diversity parameters of chloroplast DNA, gene flow and gene differentiation among different populations. Arlequin v3.5 was used to analyze standard molecular variation (AMOVA), and NetWork 4.6.1.2 was used to construct Median-Joining network for cpDNA haplotypes among intraspecific populations of Malus baccata.【Result】The length of four non-coding regions of chloroplast DNA was 3 777 bp after sequencing, splicing, alignment and merging, and 171 variable sites were detected, which included 1 singleton variable sites, 20 parsimony informative sites and 150 insertion-deletion gaps. Among 215 accessions of Malus baccata, the number of variable sites of region trnH-psbA, trnS-trnG spacer + intron, trnT-5'trnL and 5'trnL-trnF were 26, 32, 103 and 10, respectively. The number of haplotypes for four regions were 8, 8, 6 and 4, respectively, and after four regions merged, the haplotypes of chloroplast DNA fragments were 24. The region with highest nucleotide diversity was trnT-5'trnL (Pi=0.01174), and the region with highest haplotype diversity was trnS-trnG spacer + intron (Hd=0.599), and the haplotype diversity of 5'trnL-trnF was the lowest (Hd=0.228). The cpDNA diversity of Malus baccata was high (Hd=0.727, Pi=0.00577). Tajima’s test showed all Tajima’s D values were not statistical at different levels, which indicated that variation of those chloroplast regions followed natural theory of molecular evolution. AMOVA showed that genetic variation mainly existed within populations.【Conclusion】The four non-coding regions of chloroplast DNA were suitable for the analysis of genetic diversity and phylogenetics of Malus baccata. At the cpDNA level, it was not natural selection, but mutation pressure and genetic drift that led to population evolution of Malus baccata. The genetic differentiation among populations was not completely correlated with their geographical distance. Malus baccata might originate from several sites, and the three possible origins, including Heilongjiang and Jilin, Inner Mongolia, Gansu and Shanxi, were inferred.

    FOOD SCIENCE AND ENGINEERING
    Identification and Analysis of Phenolic Acids in Rice Using Ultra-High Performance Liquid Chromatography-Tandem Mass Spectrometry
    ZHAO Shan,ZHONG LingLi,ZHOU Hong,LI Xi,LEI XinYu,HUANG ShiQun,ZHENG XingGuo,FENG JunYan,LEI ShaoRong,GUO LingAn
    Scientia Agricultura Sinica. 2020, 53(3):  612-631.  doi:10.3864/j.issn.0578-1752.2020.03.013
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    【Objective】 Rice is one of the most important crops in the world, and it is also an important source of phenolic acids in people’s diet. To further understand and explore the functional nutrition of rice, an ultra-high performance liquid chromatography tandem mass spectrometry (UPLC-MS/MS) method was established for identification and analysis of rice phenolic acids in the present study. 【Method】 The qualitative and quantitative analysis of 19 phenolic acids in 14 samples of white rice, red rice, purple rice and black rice from Sichuan province, was carried out by UPLC-MS/MS. The pretreatment conditions, including alkali hydrolysis, acid hydrolysis and purification extraction, were optimized, besides, the chromatographic column, mobile phase condition and mass spectrometry conditions were optimized too. Furthermore, all detection was carried out by electrospray ionization and multi reaction monitoring mode. Finally, the content of free ester, soluble ester, soluble glycoside, insoluble binding and insoluble glycoside phenolic acid in brown rice samples was determined by using the optimized analytical method. 【Result】 The optimal conditions were obtained through the comparison and optimization of the pre-treatment conditions. It was as follows: alkaline hydrolysis was 4 hours at the concentration of 1% ascorbic acid and 10 mmol·L -1 EDTA, and acid hydrolysis was 1 hour at the concentration of 1 mol·L -1 HCl; all purification and extraction were carried out with ethylacetate containing 0.2% BHA; HSS T3 column was used, acetonitrile-0.01% formic acid aqueous solution was used as mobile phase for gradient elution; except trans-cinnamic acid adopts positive ion mode, the rest were negative ion mode. The compounds had good peak shape, high resolution and sensitivity. The linear range of 19 phenolic acids was good (R 2≥0.9997), the detection limit was 0.023-4.728 μg·L -1, and the quantitative limit was 0.076-15.759 μg·L -1. Recoveries of 19 phenolic acids in direct extraction were 55.3%-98.0%. Recoveries of 18 phenolic acids (except chlorogenic acid) in alkali hydrolysis and acid hydrolysis were 90.8%-103.1% and 51.7%-100.3%, respectively. In total, there were 14 phenolic acids in 14 rice samples determined using this method, 12 of which were quantitative. The total content range of phenolic acids was 356.3-1 234.5 mg·kg -1. Ferulic acid, protocatechuic acid, vanillic acid, p-coumaric acid, sinapic acid and p-hydroxybenzoic acid had higher content. Protocatechuic acid and vanillic acid could be mainly found in purple rice and black rice, most of which were insoluble binding type, soluble ester type and soluble glycosidic phenolic acid. 【Conclusion】 The method obtained in this study was accurate and sensitive. The addition of protectors effectively inhibited the degradation of phenolic acid and increased the identification and quantitative analysis of free and glycosidic phenolic acid during extraction and determination. Therefore, distribution of phenolic acid could be presented more accurately and comprehensively in rice.

    Effects of Histone Acetylation on Ganoderma lucidum Growth, Polysaccharide and Ganoderic Acid Biosynthesis
    ZHANG ZongYuan,JIANG YongMei,ZHANG WenXian
    Scientia Agricultura Sinica. 2020, 53(3):  632-641.  doi:10.3864/j.issn.0578-1752.2020.03.014
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    【Objective】Histone acetylation modification plays an important role in the growth, development and metabolic synthesis of fungi. Few epigenetic studies of higher medicinal fungi were reported at present. In this study, the effects of histone acetylation on the growth and development of Ganoderma lucidum (G. lucidum) and the synthesis of its main metabolites were studied by adding chemical epigenetic inhibitor octanedianiline hydroxamic acid (SAHA), which provided a theoretical basis for improving the biosynthesis of G. lucidum polysaccharides and Ganoderma acid (GA) by epigenetic means.【Method】A two-stage cultivation, liquid fermentation combined with static cultivation, was applied to culture G. lucidum. The cell was treated with different concentration of SAHA (0, 0.6, 60, 120, and 180 μmol?L -1) during the liquid static cultivation of G. lucidum. Biomass, sugar consumption, mycelial mat formation, mycelial morphology, sporulation and biosynthesis of GA and G.lucidum polysaccharides were measured or observed by conventional methods. Histone acetylation levels of G. luidum were examined by Western blot, the relative expression levels of polysaccharides biosynthesis genes (e.g. ugp, gls, and pgm), GA biosynthesis genes (e.g. hmg, sqs, se, and ls) and global regulator vet, LaeA gene were detected by qRT-PCR. 【Result】The acetylation level of histone H4 in G. lucidum treated with SAHA increased to 1.6 times as much as that under control group. SAHA inhibited the growth of G. lucidum mycelia and the production of pigments, and changed the morphology of mycelia. The formation of spores was also inhibited, and the higher the concentration of SAHA, the more obvious the inhibition degree. SAHA treatment significantly increased the yield of G. lucidum polysaccharides, up to 50%, and the biosynthesis of GA was inhibited, which decreased by 13%-27% compared with the control. The results of qRT-PCR analysis showed that the gene expression of the key enzymes in G.lucidum polysaccharides and GA synthesis were up-regulated in different degrees under SAHA treatment. The gene expression of the key enzymes in polysaccharides synthesis were increased by 1.5-3.5 times and that of the key enzymes in GA synthesis by 1.8-12.1 times. The expression of vet and LaeA genes, the global regulators, were inhibited, which was 11.3%-62.4% of the control group.【Conclusion】Histone acetylation could regulate the growth and development of G. lucidum through global regulatory factors, thus affecting the biosynthesis of GA, while histone acetylation also had an effect on G. lucidum polysaccharides biosynthesis.

    ANIMAL SCIENCE·VETERINARY SCIENCE·RESOURCE INSECT
    Analysis and Identification of circRNAs of Skeletal Muscle at Different Stages of Sheep Embryos Based on Whole Transcriptome Sequencing
    SHI TianPei,WANG XinYue,HOU HaoBin,ZHAO ZhiDa,SHANG MingYu,ZHANG Li
    Scientia Agricultura Sinica. 2020, 53(3):  642-657.  doi:10.3864/j.issn.0578-1752.2020.03.015
    Abstract ( 437 )   HTML ( 29 )   PDF (3884KB) ( 405 )   Save
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    【Objective】The meat production of livestock, which is closely related to the development of skeletal muscle, is an important economic trait to measure the quality of livestock. For mammals, the skeletal muscle development depends on the growth and differentiation of embryonic myocyte, which has a significant impact on the subsequent growing potential. In this study, the developmental mode of skeletal muscle, the important transformation nodes, the formation of muscle fibers and the molecular regulation mechanism of transformation were mainly explored. 【Method】 Based on the previous research, the important nodes D85, D105 and D135 related to the myotube development were used in the experiment, and the longissimus dorsi muscles were sequenced by whole transcriptome sequencing. The differentially expressed (DE) circRNAs were screened by bioinformatics analysis and verified by quantitative real-time PCR (qRT-PCR). 【Result】 1 126 DE circRNAs were obtained by conditional screening (|log2| ≥1 and P≤0.05). The 3 groups were compared and many specific expressions of circRNA were found at each stage, but in the D85 vs D135 group, the amount was the most. 374 DE circRNAs were obtained, which contained 201 up-regulated and 173 down-regulated, and 44.7% of the DE genes were differentially expressed with a difference of more than 4 times. These DE circRNAs were subjected to run GO and KEGG functional analysis and targeted prediction, and they were enriched into some pathways, such as energy metabolism and signal transduction, which involved in muscle differentiation and muscle fiber development, including MAPK, PI3K-Akt, Ras, regulation of actin cytoskeleton and other signal transduction pathways. According to the results, it was confirmed that the DE circRNAs enriched during D85 to D105 were mostly associated with cell proliferation and survival, regulation of myocyte development and cell cycle, while D105 to D135 were mainly related to energy conversion, material transport, RNA transport, and DNA repair. By drawing co-expression visualization network with the targeted prediction results used by Cytoscape, the core regulatory transcripts, such as circRNA8239, circRNA19073, circRNA2765 and circRNA1616, were identified. In the D105 period, a key factor circRNA7527 that regulated the conversion of fast and slow muscle types was found, which targets the bta-miR-135a, bta-miR-615, and chi-miR-133a-5p to regulate the MEF2C gene. According to the differential expression and functional prediction in three comparison groups, 4 circRNAs related to muscle development and 4 target miRNA were selected for qRT-PCR, and the results showed that the gene expression trend was consistent with the sequencing data. 【Conclusion】 It was verified that the stabilization of the number of muscle fibers occurred between sheep embryos at D85 and D105, and muscle fiber hypertrophy happened during the D105 to D135 period, which lead to the conclusion that D105 was probably a key time point. In this study, we firstly constructed a circRNA map in sheep embryonic skeletal muscle development based on the whole transcriptome sequencing. The transcriptome differences at key stages were revealed, and multiple circRNAs and miRNAs targeting MEF2C that involved in the MAPK signaling pathway were found, which provided reference for livestock myofiber development research and other research on non-coding RNA.

    Advances in Mechanisms of Biosynthesis and Regulation of Pasteurella multocida Capsule
    GUAN LiJun,XUE Yun,DING WenWen,ZHAO ZhanQin
    Scientia Agricultura Sinica. 2020, 53(3):  658-668.  doi:10.3864/j.issn.0578-1752.2020.03.016
    Abstract ( 430 )   HTML ( 17 )   PDF (1337KB) ( 462 )   Save
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    Pasteurella multocida can be widely infected with a variety of animals, causing hemorrhagic septicemia or infectious pneumonia. P. multocida possess a viscous capsular polysaccharide on the cell surface, which is a critical structural component and virulence factor, and plays an important role in the interaction between bacteria and the host, promoting the adhesion of bacteria to the host surface and enhancing the virulence of the bacteria. The molecular structure of the P. multocida capsule is similar to that of vertebrate glycosaminoglycan, which is polymerized by repeated disaccharide units to form a linear polysaccharide chain, which is an important immunological material basis for molecular mimicry, resistance to phagocytosis, and immune evasion during the infection of the host. In recent years, a series of important research advances have been made in the biosynthesis and regulation mechanism aspects of P. multocida capsule, providing a certain basic knowledge for the molecular pathogenesis of P. multocida capsule, and supplying a theoretical basis for the development of the capsular polysaccharide vaccine of P. multocida. This paper systematically illuminates the biosynthesis and expression regulation mechanisms of P. multocida capsule, including the serotyping of the capsule, the composition and structure of the capsular polysaccharide, the biosynthesis gene cluster and function of the capsule, the molecular synthesis mechanism of capsular polysaccharide, the expression regulation mechanism of capsular biosynthesis gene cluster, a total of five aspects. According to the capsular antigen, P. multocida is divided into five capsular serogroups of A, B, D, E, and F. The type A capsule GAG component is hyaluronic acid; the type D is heparosan; the type F is chondroitin, which is repeatedly composed of its corresponding disaccharide unit [β-GlcUA/β-GlcNAc], [β-GlcUA/α-GlcNAc], [β-GlcUA/β-GalNAc], respectively; the type B capsular polysaccharide is composed of arabinose, mannose and galactose in a certain structural form, and the composition and chemical structure of type E capsular polysaccharide are uncertain. Genes related to the biosynthesis of A, B, D, E and F capsules of P. multocida exist in the form of gene clusters and are divided into three distinct functional regions, R1, R2 and R3; the R1 region is responsible for transporting the capsular polysaccharide, the R2 region is responsible for the activation of the monosaccharide and the assembly of the capsular polysaccharide, and the R3 region is responsible for the modification of capsular polysaccharide (phospholipid replacement); according to the structure and the number of genes of the R2 region, the biosynthetic gene clusters of the five capsules can be divided into two categories: type A, D and F are Class I, and R2 contains 4 genes; types B and E are Class II, and R2 contains 9 genes, and using the specific gene in the R2 region to design primers, the capsular serotype of P. multocida can be rapidly identified by PCR. The capsular GAG of P. multocida is synthesized in the cytoplasm, and then exported to the cell surface via the ABC transporter formed by the protein encoded by the R1 region, and tightly bound to the cell surface by covalent attachment to the phospholipid; during the biosynthesis of the P. multocida capsular GAG, the glycosyltransferase gene located in the R2 region determines the type of activated monosaccharide and the type of capsular polysaccharide after assembly. In the biosynthetic gene cluster of the P. multocida capsule, the R1 and R2 regions form an operon with the same transcriptional direction, while the R3 transcription direction is opposite, and the promoter regions of both are located on the DNA sequence between the R2 and R3 regions; the transcriptional process of the P. multocida capsular biosynthesis gene cluster is positive regulated by the Fis protein, and the translation process is mainly positive regulated by Hfq protein.