Scientia Agricultura Sinica ›› 2017, Vol. 50 ›› Issue (20): 3848-3859.doi: 10.3864/j.issn.0578-1752.2017.20.002
• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles Next Articles
WANG RuiYun1,2, LIU XiaoYu1, WANG HaiGang2, LU Ping3, LIU MinXuan3, CHEN Ling2, QIAO ZhiJun2
[1] MOTUZAITE-MATUZEVICIUTE G, STAFF R A, HUNT H V, LIU X Y, JONES M K. The early chronology of broomcorn millet(Panicum miliaceum) in Europe. Antiquity, 2013, 87: 1073-1085.
[2] 柴岩, 冯佰利, 王宏岩. 中国黄米食品. 杨凌: 西北农林科技大学出版社, 2012.
CHAI Y, FENG B L, WANG H Y. Food of proso millet in China. Yangling: Northwest A&F University Press, 2012. (in Chinese)
[3] M’RIBU H K, HILU K W. Detection of interspecific and intraspecific variation in Panicum millets through random amplified polymorphic DNA. Theoretical and Applied Genetics, 1994, 88: 412-416.
[4] LÁGLER R, GYULAI G, HUMPHREYS M, SZABÓZ, HORVÁTH L, BITTSÁNSZKY A, KISS J, HOLLY L, HESZKY L. Morphological and molecular analysis of common millet (P. miliaceum) cultivars compared to a DNA sample from the 15th century (Hungary). Euphytica, 2005, 146: 77-85.
[5] KARAM D, WESTRA P, NISSEN S J, WARD S M, FIGUEIREDO J E F. Genetic diversity among proso millet (Panicum miliaceum) biotypes assessed by AFLP technique. Planta Daninha, 2004, 22: 167-174.
[6] KARAM D, WESTRA P, NISSEN S J, WARD S M, FIGUEIREDO J E F. Assessment of silver-stained AFLP markers for studying DNA polymorphism in proso millet (Panicum miliaceum L.). Revista Brasileira de Botânica, 2006, 29: 609-615.
[7] VAN INGHELANDT D, MELCHINGER A E, LEBRETON C, STICH B. Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers. Theoretical and Applied Genetics, 2010, 120: 1289-1299.
[8] HU X Y, WANG J F, LU P, ZHANG H S. Assessment of genetic diversity in broomcorn millet (Panicum miliaceum L.) using SSR markers. Journal of Genetics and Genomics, 2009, 36(8): 491-500.
[9] RAJPUT S G, TAMMY P H, DIPAK K S. Development and characterization of SSR markers in proso millet based on switchgrass genomics. American Journal of Plant Sciences, 2014, 5(1): 175-186.
[10] CHO Y I, CHUNG J W, LEE G A, MA K H, DIXIT A, GWAG J G, PARK Y J. Development and characterization of twenty-five new polymorphic microsatellite markers in proso millet (Panicum miliaceum L.). Genes & Genomics, 2010, 32: 267-273.
[11] HUNT H V, CAMPANA M G, LAWES M C, PARK Y J, BOWER M A, HOWE C J, JONES M K. Genetic diversity and phylogeography of broomcorn millet (Panicum miliaceum L.) across Eurasia. Molecular Ecology, 2011, 22: 4756-4771.
[12] 连帅, 王瑞云, 马跃敏, 刘笑瑜, 季煦. 不同生态区糜子种质资源的遗传多样性分析. 山西农业大学学报(自然科学版), 2015, 35(3): 225-231.
LIAN S, WANG R Y, MA Y M, LIU X Y, JI X. Genetic diversity of broomcorn millet (Panicum miliaceum L.) germplasms of different ecotype zone of China. Journal of Shanxi Agricultural University (Natural Science Edition), 2015, 35(3): 225-231. (in Chinese)
[13] 董俊丽, 王海岗, 陈凌, 王君杰, 曹晓宁, 王纶, 乔治军. 糜子骨干种质遗传多样性和遗传结构分析. 中国农业科学, 2015, 48(16): 3121-3131.
DONG J L, WANG H G, CHEN L, WANG J J, CAO X N, WANG L, QIAO Z J. Analysis of genetic diversity and structure of proso millet core germplasm. Scientia Agricultura Sinica, 2015, 48(16): 3121-3131. (in Chinese)
[14] 刘笑瑜, 王瑞云, 刘敏轩, 邱岩岩, 季煦, 连帅, 乔治军, 王纶, 王海岗. 利用SSR标记分析40份糜子资源的遗传多样性. 分子植物育种, 2016, 14(6): 1631-1636.
LIU X Y, WANG R Y, LIU M X, QIU Y Y, JI X, LIAN S, QIAO Z J, WANG L, WANG H Z. Genetic diversities among 40 parts of broomcorn millet revealed by SSR markers. Molecular Plant Breeding, 2016, 14(6): 1631-1636. (in Chinese)
[15] 王瑞云, 季煦, 陆平, 刘敏轩, 许月, 王纶, 王海岗, 乔治军. 利用荧光SSR分析中国糜子遗传多样性. 作物学报, 2017, 43(4): 530-548.
Wang R Y, Ji X, Lu P, Liu M X, XU Y, Wang L, Wang H G, Qiao Z J. Analysis of genetic diversity in common millet (Panicum miliaceum) using fluorescent SSR in China. Acta Agronomica Sinica, 2017, 43(4): 530-548. (in Chinese)
[16] RAJPUT S G, SANTRA D K. Evaluation of genetic diversity of proso millet (Panicum miliaceum) germplasm available in the USA using SSR markers. Crop Science, 2016, 56: 1-9.
[17] LIU M X, XU Y, HE J H, ZHANG S, WANG Y Y, LU P. Genetic diversity and population structure of broomcorn millet (Panicum miliaceum L.) cultivars and landraces in China based on microsatellite markers. International Journal of Molecular Sciences, 2016, 17(3): E370.
[18] 连帅, 陆平, 乔治军, 张琦, 张茜, 刘敏轩, 王瑞云. 利用SSR分子标记研究国内外黍稷地方品种和野生资源的遗传多样性. 中国农业科学, 2016, 49(17): 3264-3275.
LIAN S, Lu P, QIAO Z J, ZHANG Q, ZHANG Q, LIU M X, WANG R Y. Genetic diversity in broomcorn millet (Panicum miliaceum L.) from China and abroad by using SSR markers. Scientia Agricultura Sinica, 2016, 49(17): 3264-3275. (in Chinese)
[19] 王星玉, 王纶. 黍稷种质资源描述规范与数据标准. 北京: 中国农业出版社, 2006.
WANG X Y, WANG L. Descriptors and data standard for broomcorn millet (Panicum miliaceum L.). Beijing: China Agriculture Press, 2006. (in Chinese)
[20] EDWARDS K, JOHNSTONE C, THOMPSON C. A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Research, 1991, 19: 1349.
[21] PREVOST A, WILKINSON M J. A new system of comparing PCR primers applied to ISSR fingerprinting of potato cultivars. Theoretical and Applied Genetics, 1999, 98(1): 107-112.
[22] LIU K, MUSE S V. PowerMarker: integrated analysis environment for genetic marker data. Bioinformatics, 2005, 21: 2128-2129.
[23] YEH F C, BOYLE T J. Population genetic analysis of co-dominant and dominant markers and quantitative traits. Belgian Journal of Botany, 1997, 129: 157.
[24] TAMURA K, PETERSON D, PETERSON N, STECHER G, NEI M, KUMAR S. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance and maximum parsimony methods. Molecular Biology and Evolution, 2011, 665: 2731-2739.
[25] FALUSH D, STEPHENS M, PRITCHARD J K. Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics, 2003, 164: 1567-1587.
[26] Evanno G, Regnaut S, Goudet J. Detecting the number of cluster of individuals using the software structure: a simulation study. Molecular Ecology, 2005, 14: 2611-2620.
[27] YU J, LA ROTA M, KANTETY R, SORRELLS M. EST derived SSR markers for comparative mapping in wheat and rice. Molecular Genetics and Genomics, 2004, 271(6): 742-751.
[28] SATYA P, KARAN M, JANA S, MITRA S, SHARMA A, KARMAKAR P G, RAY D P. Start codon targeted (SCoT) polymorphism reveals genetic diversity in wild and domesticated populations of ramie (Boehmeria nivea L. Gaudich.), a premium textile fiber producing species. Meta Gene, 2015, 3: 62-70.
[29] SATYA P, BANERJEE R, KARAN M, MUKHOPADHYAY E, CHAUDHARY B, BERA A, MARUTHI R T, SARKAR S K. Insight into genetic relation and diversity of cultivated and semi-domesticated under-utilized Crotalaria species gained using start codon targeted (SCoT) markers. Biochemical Systematics and Ecology, 2016, 66: 24-32.
[30] BHATTACHARYA P, KUMARIA S, KUMAR S, TANDON P. Start Codon Targeted (SCoT) marker reveals genetic diversity of Dendrobium nobile Lindl., an endangered medicinal orchid species. Gene, 2013, 529: 21-26.
[31] TIWARI G, SINGH R, SINGH N, CHOUDHURY D R, PALIWAL R, KUMAR A, GUPTA V. Study of arbitrarily amplified (RAPD and ISSR) and gene targeted (SCoT and CBDP) markers for genetic diversity and population structure in Kalmegh [Andrographis paniculata (Burm. f.) Nees]. Industrial Crops and Products, 2016, 86: 1-11.
[32] DREISIGACKER S, ZHANG P, WARBURTON M L, VAN GINKEL M, HOISINGTON D, BOHN M, MELCHINGER A E. SSR and pedigree analyses of genetic diversity among CIMMYT wheat lines targeted to different megaenvironments. Crop Science, 2004, 44(2): 381-388. |
[1] | JIANG Peng, ZHANG Peng, YAO JinBao, WU Lei, HE Yi, LI Chang, MA HongXiang, ZHANG Xu. Phenotypic Characteristics and Related Gene Analysis of Ningmai Series Wheat Varieties [J]. Scientia Agricultura Sinica, 2022, 55(2): 233-247. |
[2] | XiaoChuan LI,ChaoHai WANG,Ping ZHOU,Wei MA,Rui WU,ZhiHao SONG,Yan MEI. Deciphering of the Genetic Diversity After Field Late Blight Resistance Evaluation of Potato Breeds [J]. Scientia Agricultura Sinica, 2022, 55(18): 3484-3500. |
[3] | YingLing WAN,MengTing ZHU,AiQing LIU,YiJia JIN,Yan LIU. Phenotypic Diversity Analysis of Chinese Ornamental Herbaceous Peonies and Its Germplasm Resource Evaluation [J]. Scientia Agricultura Sinica, 2022, 55(18): 3629-3639. |
[4] | HU GuangMing,ZHANG Qiong,HAN Fei,LI DaWei,LI ZuoZhou,WANG Zhi,ZHAO TingTing,TIAN Hua,LIU XiaoLi,ZHONG CaiHong. Screening and Application of Universal SSR Molecular Marker Primers in Actinidia [J]. Scientia Agricultura Sinica, 2022, 55(17): 3411-3425. |
[5] | CHEN Xu,HAO YaQiong,NIE XingHua,YANG HaiYing,LIU Song,WANG XueFeng,CAO QingQin,QIN Ling,XING Yu. Association Analysis of Main Characteristics of Bur and Nut with SSR Markers in Chinese Chestnut [J]. Scientia Agricultura Sinica, 2022, 55(13): 2613-2628. |
[6] | XU Xiao,REN GenZeng,ZHAO XinRui,CHANG JinHua,CUI JiangHui. Accurate Identification and Comprehensive Evaluation of Panicle Phenotypic Traits of Landraces and Cultivars of Sorghum bicolor (L.) Moench in China [J]. Scientia Agricultura Sinica, 2022, 55(11): 2092-2108. |
[7] | TANG XiuJun,FAN YanFeng,JIA XiaoXu,GE QingLian,LU JunXian,TANG MengJun,HAN Wei,GAO YuShi. Genetic Diversity and Origin Characteristics of Chicken Species Based on Mitochondrial DNA D-loop Region [J]. Scientia Agricultura Sinica, 2021, 54(24): 5302-5315. |
[8] | LI XinYuan, LOU JinXiu, LIU QingYuan, HU Jian, ZHANG YingJun. Genetic Diversity Analysis of Rhizobia Associated with Medicago sativa Cultivated in Northeast and North China [J]. Scientia Agricultura Sinica, 2021, 54(16): 3393-3405. |
[9] | WANG FuQiang,ZHANG Jian,WEN ChangLong,FAN XiuCai,ZHANG Ying,SUN Lei,LIU ChongHuai,JIANG JianFu. Identification of Grape Cultivars Based on KASP Markers [J]. Scientia Agricultura Sinica, 2021, 54(13): 2830-2842. |
[10] | YANG Tao,HUANG YaJie,LI ShengMei,REN Dan,CUI JinXin,PANG Bo,YU Shuang,GAO WenWei. Genetic Diversity and Comprehensive Evaluation of Phenotypic Traits in Sea-Island Cotton Germplasm Resources [J]. Scientia Agricultura Sinica, 2021, 54(12): 2499-2509. |
[11] | CUI YiPing,PENG AiTian,SONG XiaoBing,CHENG BaoPing,LING JinFeng,CHEN Xia. Investigation on Occurrence of Citrus Huanglongbing and Virus Diseases, and Prophage Genetic Diversity of Huanglongbing Pathogen in Meizhou, Guangdong [J]. Scientia Agricultura Sinica, 2020, 53(8): 1572-1582. |
[12] | JiaYing CHANG,ShuSen LIU,Jie SHI,Ning GUO,HaiJian ZHANG,HongXia MA,ChunFeng YANG. Pathogenicity and Genetic Diversity of Bipolaria maydis in Sanya, Hainan and Huang-Huai-Hai Region [J]. Scientia Agricultura Sinica, 2020, 53(6): 1154-1165. |
[13] | MoRan XU,RuiMing LIN,FengTao WANG,Jing FENG,ShiChang XU. Evaluation of Resistance to Stripe Rust and Genetic Diversity and Detection of Resistance Genes in 103 Wheat Cultivars (Lines) [J]. Scientia Agricultura Sinica, 2020, 53(4): 748-760. |
[14] | GAO Yuan,WANG DaJiang,WANG Kun,CONG PeiHua,ZHANG CaiXia,LI LianWen,PIAO JiCheng. Genetic Diversity and Phylogenetics of Malus baccata (L.) Borkh Revealed by Chloroplast DNA Variation [J]. Scientia Agricultura Sinica, 2020, 53(3): 600-611. |
[15] | WANG BaoBao,GUO Cheng,SUN SuLi,XIA YuSheng,ZHU ZhenDong,DUAN CanXing. The Genetic Diversity, Pathogenicity, and Toxigenic Chemotypes of Fusarium graminearum Species Complex Causing Maize Ear Rot [J]. Scientia Agricultura Sinica, 2020, 53(23): 4777-4790. |
|