Scientia Agricultura Sinica ›› 2013, Vol. 46 ›› Issue (2): 225-232.doi: 10.3864/j.issn.0578-1752.2013.02.001

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS •     Next Articles

Fine Mapping and Physiological Characteristics of A Green-Revertible Albino Gene gra75 in Rice

 WANG  Ping-Rong, WANG  Bing, SUN  Xiao-Qiu, SUN  Chang-Hui, WAN  Chun-Mei, MA  Xiao-Zhi, DENG  Xiao-Jian   

  1. Rice Research Institute, Sichuan Agricultural University, Chengdu 611130
  • Received:2012-11-15 Online:2013-01-15 Published:2012-12-18

Abstract: 【Objective】 On the basis of phenotypic and physiological characteristics of a green-revertible albino mutant gra75, the mutant gene was finely mapped. 【Method】A green-revertible albino mutant was isolated from ethyl methanesulfonate mutagenesis. Phenotypes of the mutant were observed, and its physiological characteristics and main agronomic traits were analyzed. Genetic mapping of the mutant gene was conducted by using molecular marker and F2 mapping population of gra75/Zhefu 802 to identify this candidate gene. 【Result】 Under paddy ?eld conditions, gra75 mutant plants exhibited a normal green phenotype up to the third-leaf stage. Subsequently, it produce albino phenotype during the fourth to seventh leaf stage, but then it developed nearly normal green leaves from the eighth-leaf stage. At the mature stage, the gra75 mutant and its wild-type had no significant difference in major agronomic traits. On the other hand, chlorophyll and carotenoid content in albino leaves of the mutant obviously decreased at seedling stage. Electron microscopic observation revealed that the number of chloroplasts, thylakoid membranes, granums and starch granules significantly decreased in mesophyll cells of the albino leaves. Genetic analysis suggested that the mutant phenotype of gra75 was controlled by one recessive nuclear gene. The gra75 mutant gene was mapped between InDel markers HC1 and HC2 on the short arm of rice chromosome 6, with genetic distances of 0.06 cM and 0.6 cM, respectively, and with a physical interval of 120 kb. By analyzing and sequencing the candidate genes in this genomic region, it was found that there was a single nucleotide change (C716T) in exon 5 of LOC_Os06g07210 gene encoding RNRL1 (ribonucleotide reductase large subunit) in the gra75 mutant, which caused a missense mutation (Ala to Val) in the encoded product.【Conclusion】The gra75 mutant gene was allelic to V3 (Virescent3) gene. However, the green-revertible albino character of gra75 mutant could express steadily at seedling stage, and moreover, this albino phenotype did not affect significantly main agronomic traits at the mature stage. So the mutant gene of gra75 could be applicable in hybrid rice breeding as a leaf color marker gene.

Key words: rice , green-revertible albino , chloroplast , chlorophyll , V3 mutant

[1]Koussevitzky S, Nott A, Mockler T C, Hong F, Sachetto-Martins G, Surpin M, Lim J, Mittler R, Chory J. Signals from chloroplasts converge to regulate nuclear gene expression. Science, 2007, 316(5825): 715-719.

[2]Mandel M A, Feldmann K A, Herrera-Estrella L, Rocha-Sosa M, Leon P. CLA1, a novel gene required for chloroplast development, is highly conserved in evolution. The Plant Journal, 1996, 9(5): 649-658.

[3]Kurata N, Miyoshi K, Nonomura K I, Yamazaki Y, Ito Y. Rice mutants and genes related to organ development, morphogenesis and physiological traits. Plant Cell and Physiology, 2005, 46(1): 48-62.

[4]Jung K H, Hur J, Ryu C H, Choi Y, Chung Y Y, Miyao A, Hirochika H, An G. Characterization of a rice chlorophyll-de?cient mutant using the T-DNA gene-trap system. Plant Cell and Physiology, 2003, 44(5): 463-472.

[5]Zhang H, Li J, Yoo J H, Yoo S C, Cho S H, Koh H J, Seo H S, Paek N C. Rice Chlorina-1 and Chlorina-9 encode ChlD and ChlI subunits of Mg-chelatase, a key enzyme for chlorophyll synthesis and chloroplast development. Plant Molecular Biology, 2006, 62(3): 325-337.

[6]Lee S, Kim J H, Yoo E S, Lee C H, Hirochika H, An G. Differentia regulation of chlorophyll a oxygenase genes in rice. Plant Molecular Biology, 2005, 57(6): 805-818.

[7]Wu Z M, Zhang X, He B, Diao L P, Sheng S L, Wang J L, Guo X P, Su N, Wang L F, Jiang L, Wang C M, Zhai F Q, Wan J M. A chlorophyll-de?cient rice mutant with impaired chlorophyllide esteri?cation in chlorophyll biosynthesis. Plant Physiology, 2007, 145(1): 29-40.

[8]Yoo S C, Cho S H, Sugimoto H, Li J, Kusumi K, Koh H J, Koh I, Paek N C. Rice virescent3 and stripe1 encoding the large and small subunits of ribonucleotide reductase are required for chloroplast biogenesis during early leaf development. Plant Physiology, 2009, 150(1): 388-401.

[9]Sugimoto H, Kusumi K, Noguchi K, Yano M, Yoshimura A, Iba K. The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria. The Plant Journal, 2007, 52(3): 512-527.

[10]Kusaba M, Ito H, Morita R, Iida S, Sato Y, Fujimoto M, Kawasaki S, Tanaka R, Hirochika H, Nishimura M, Tanaka A. Rice NON-YELLOW COLORING1 is involved in light-harvesting complex II and grana degradation during leaf senescence. The Plant Cell, 2007, 19(4): 1362-1375.

[11]Park S Y, Yu J W, Park J S, Li J, Yoo S C, Lee N Y, Lee S K, Jeong S W, Seo H S, Koh H J, Jeon J S, Park Y I, Paek N C. The senescence-induced staygreen protein regulates chlorophyll degradation. The Plant Cell, 2007, 19(5): 1649-1664.

[12]Wang P R, Gao J X, Wan C M, Zhang F T, Xu Z J, Huang X Q, Sun X Q, Deng X J. Divinyl chlorophyll(ide) a can be converted to monovinyl chlorophyll(ide) a by a divinyl reductase in rice. Plant Physiology, 2010, 153(3): 994-1003.

[13]Kusumi K, Mizutani A, Nishimura M, Iba K. A virescent gene V1 determines the expression timing of plastid genes for transcription/translation apparatus during early leaf development in rice. The Plant Journal, 1997, 12(6): 1241-1250.

[14]赵海军, 吴殿星, 舒庆尧, 沈圣泉, 马传喜. 携带白化转绿型叶色标记光温敏核不育系玉兔S 的选育及其特征特性. 中国水稻科学, 2004, 18(6): 515-521.

Zhao H J, Wu D X, Shu Q Y, Shen S Q, Ma C X. Breeding and characteristics of photo-thermo sensitive genic male sterile rice Yutu S labeled with green-revertible albino leaf marker. Chinese Journal of Rice Science, 2004, 18(6): 515-521. (in Chinese)

[15]Chen T, Zhang Y D, Zhao L, Zhu Z, Lin J, Zhang S B, Wang C L. Physiological character and gene mapping in a new green-revertible albino mutant in rice. Journal of Genetics and Genomics, 2007, 34(4): 331-338.

[16]Chen T, Zhang Y D, Zhao L, Zhu Z, Lin J, Zhang S B, Wang C L. Fine mapping and candidate gene analysis of a green-revertible albino gene gra(t) in rice. Journal of Genetics and Genomics, 2009, 36(2): 117-123.

[17]兰涛, 汪斌, 凌秋平, 徐春花, 童治军, 梁康迳, 段远霖, 金晶, 吴为人. 水稻苗期低温失绿基因cisc(t)的精细定位及其候选基因的确定. 科学通报, 2010, 55(22): 2183-2187.

Lan T, Wang B, Ling Q P, Xu C H, Tong Z J, Liang K J, Duan Y L, Jin J, Wu W R. Fine mapping of cisc(t), a gene for cold-induced seedling chlorosis, and identification of its candidate in rice. Chinese Science Bulletin, 2010, 55(27/28): 3149-3153. (in Chinese)

[18]郭士伟, 王永飞, 马三梅, 李霞, 高东迎. 一个水稻叶片白化转绿叶突变体的遗传分析和精细定位. 中国水稻科学, 2011, 25(1): 95-98.

Guo S W, Wang Y F, Ma S M, Li X, Gao D Y. Genetic analysis and fine mapping of a green-revertible albino leaf mutant in rice. Chinese Journal of Rice Science, 2011, 25(1): 95-98. (in Chinese)

[19]王军, 杨杰, 陈志德, 范方军, 朱金燕, 杨金欢, 仲维功. 水稻白化转绿突变体v13(t)的生理特性和基因定位. 中国农业科学, 2011, 44(10): 1973-1979.

Wang J, Yang J, Chen Z D, Fan F J, Zhu J Y, Yang J H, Zhong W G. Physiological character and gene fine mapping of a virescent mutant v13(t) in rice (Oryza sativa L.). Scientia Agricultura Sinica, 2011, 44(10): 1973-1979. (in Chinese)

[20]Lichtenthaler H K. Chlorophylls and carotenoid: Pigments of photosynthetic membrances. Methods in Enzymology, 1987, 148: 350-382.

[21]McCouch S R, Teytelman L, Xu Y B, Lobos K B, Clare K, Walton M, Fu B Y, Maghirang R, Li Z K, Xing Y Z, Zhang Q F, Kono I, Yano M, Fjellstrom R, DeClerck G, Schneider D, Cartinhour S, Ware D, Stein L. Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.). DNA Research, 2002, 9(6): 257-279.

[22]Panaud O, Chen X, McCouch S R. Development of microsatellite markers and characterization of simple sequence length polymorphism (SSLP) in rice. Molecular and General Genetics, 1996, 252(5): 597-607.

[23]邓启云, 袁隆平. 光温敏核不育水稻育性稳定性及其鉴定技术研究. 中国水稻科学, 1998, 12(4): 200-206.

Deng Q Y, Yuan L P. Fertility stability of P(T)GMS lines in rice and its identification techniques. Chinese Journal of Rice Science, 1998, 12(4): 200-206.

[24]舒庆尧, 夏英武, 左晓旭, 刘贵付. 二系杂交水稻制繁种中利用标记辅助去杂技术. 浙江农业大学学报, 1996, 22(1): 56-60.

Shu Q Y, Xia Y W, Zuo X X, Liu G F. Maker-assisted elimination of contamination on two-line hybrid rice seed production and multiplication. Journal of Zhejiang Agricultural University, 1996, 22(1): 56-60. (in Chinese)

[25]沈圣泉, 舒庆尧, 包劲松, 吴殿星, 崔海瑞, 夏英武. 实用转绿型叶色标记不育系白丰A的应用研究. 中国水稻科学, 2004, 18(1): 34-38.

Shen S Q, Shu Q Y, Bao J S, Wu D X, Cui H R, Xia Y W. Development of a greenable leaf colour mutant Baifeng A and its application in hybrid rice production. Chinese Journal of Rice Science, 2004, 18(1): 34-38. (in Chinese)
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