Scientia Agricultura Sinica ›› 2012, Vol. 45 ›› Issue (19): 3996-4003.doi: 10.3864/j.issn.0578-1752.2012.19.011

• PLANT PROTECTION • Previous Articles     Next Articles

Cloning and Bioinformatics Analysis of Voltage-Gated Sodium Channel Gene cDNA in Bactrocera dorsalis (Hendel)

 JIANG  Xuan-Zhao, WEI  Dan-Dan, SHEN  Guang-Mao, DOU  Wei, WANG  Jin-Jun   

  1. 1.西南大学植物保护学院昆虫学及害虫控制工程重庆市市级重点实验室,重庆 400715
  • Received:2012-02-07 Online:2012-10-01 Published:2012-03-23

Abstract: 【Objective】 The objective of this study is to clone voltage-gated sodium channel gene (VGSC) from Bactrocera dorsalis (Hendel), and to identify its typical hallmarks. It will provide basic molecular information for clarifying insecticide resistance mechanism of B. dorsalis.【Method】 The cDNA sequence was isolated using RT-PCR and PCR methods. Based on the sequencing results, the bioinformatics analysis of nucleic acid and putative amino acid was conducted.【Result】An almost full-length cDNA sequence (6 446 bp) of VGSC was obtained, including a complete open reading frame (ORF) of 6 405 bp, which encoded 2 134 amino acids and included all the typical hallmarks of VGSC. The amino acid shared 91.7%, 86.9% and 42.3% identity with sodium channel genes of Drosophila melanogaster (NP_001188635), Musca domestica (AAB47604), and Homo sapiens Nav1.2 (NP_066287), respectively. 【Conclusion】A complete ORF of VGSC was sequenced with clone strategy from oriental fruit fly for the first time. Abundant alternative splicing phenomena existed in the VGSC of B. dorsalis. Three potential mutation points, which may confer resistance to pyrethroids and DDT, were observed. It is suggested that VGSC would be used as a molecular marker in phylogenetic study of insect.

Key words: Bactrocera dorsalis, sodium channel, gene cloning, bioinformatics analysis, phylogenetic analysis

[1]林进添, 曾  玲, 梁广文, 陆永跃, 王  琳. 桔小实蝇雄成虫的空间分布格局. 华南农业大学学报, 2005, 26(2): 43-46.

Lin J T, Zeng L, Liang G W, Lu Y Y, Wang L. Distribution spatial pattern of Bactrocera dorsalis males. Journal of South China Agricultural University, 2005, 26(2): 43-46. (in Chinese)

[2]Jin T, Zeng L, Lin Y Y, Lu Y Y, Liang G W. Insecticide resistance of the oriental fruit fly, Bactrocera dorsalis (Hendel) (Diptera: Tephritidae), in mainland China. Pest Management Science, 2011, 67(3): 370-376.

[3]章与苹, 曾  玲, 陆永跃, 梁广文. 华南地区桔小实蝇抗药性动态监测. 华南农业大学学报, 2007, 28(3): 20-23.

Zhang Y P, Zeng L, Lu Y Y, Liang G W. Monitoring of insecticide resistance of Bactrocera dorsalis adults in South China. Journal of South China Agricultural University, 2007, 28(3): 20-23. (in Chinese)

[4]Williamson M S, Denholm L, Bell C A, Devonshire A L. Knockdown resistance (kdr) to DDT and pyrethroid insecticides maps to a sodium channel gene locus in the housefly (Musca domestica). Molecular and General Genetics, 1993, 240(1): 17-22.

[5]Hartshorne R P, Catterall W A. Purification of the saxitoxin receptor of the sodium channel from rat brain. Proceedings of the National Academy of Sciences of the United States of America, 1981, 78(7): 4620-4624.

[6]Hartshorne R P, Messner D J, Coppersmith J C, Catterall W A. The saxitoxin receptor of the sodium channel from rat brain. Evidence for two nonidentical β subunits. The Journal of Biological Chemistry, 1982, 257(23): 13888-13891.

[7]Soderlund D M, Knipple D C. The molecular biology of knockdown resistance to pyrethroid insecticides. Insect Biochemistry and Molecular Biology, 2003, 33(6): 563-577.

[8]Loughney K, Kreber R, Ganetzky B. Molecular analysis of the para locus, a sodium channel gene in Drosophila. Cell, 1989, 58(6): 1143-1154.

[9]Ingles P J, Adams P M, Knipple D C, Soderlund D M. Characterization of voltage-sensitive sodium channel gene coding sequences from insecticide-susceptible and knockdown-resistant house fly strains. Insect Biochemistry and Molecular Biology, 1996, 26(4): 319-326.

[10]Dong K. A single amino acid change in the para sodium channel protein is associated with knockdown-resistance (kdr) to pyrethroid insecticides in German cockroach. Insect Biochemistry and Molecular Biology, 1997, 27(2): 93-100.

[11]Shao Y M, Dong K, Tang Z H, Zhang C X. Molecular characterization of a sodium channel gene from the silkworm Bombyx mori. Insect Biochemistry and Molecular Biology, 2009, 39(2): 145-151.

[12]Dong K. Insect sodium channels and insecticide resistance. Invertebrate Neuroscience, 2007, 7(1): 17-30.

[13]Larkin M A, Blackshields G, Brown N P, Chenna R, McGettigan P A, McWilliam H, Valentin F, Wallace I M, Wilm A, Lopez R, Thompson J D, Gibson T J, Higgins D G. Clustal W and clustal X version 2.0. Bioinformatics, 2007, 23(21): 2947-2948.

[14]Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maxium parsimony methods. Molecular Biology and Evolution, 2011, 28(10): 2731-2739.

[15]Guindon S, Dufayard J F,  Lefort V, Anisimova M, Hordijk W, Gascuel O. New algorithms and methods to estimate maximum- likelihood phylogenies: assessing the performance of phyML 3.0. Systematic Biology, 2010, 59(3): 307-321.

[16]Catterall W A. From ionic currents to molecular review mechanisms: The structure and function of voltage-gated sodium channels. Neuron, 2000, 26(1): 13-25.

[17]Thackeray J R, Ganetzky B. Developmentally regulated alternative splicing generates a complex array of Drosophila para sodium channel isoforms. The Journal of Neuroscience, 1994, 14(5): 2569-2578.

[18]Song W, Liu Z, Tan J, Nomura Y, Dong K. RNA editing generates tissue-specific sodium channels with distinct gating properties. The Journal of Biological Chemistry, 2004, 279(31): 32554-32561.

[19]Thackeray J R, Ganetzky B. Conserved alternative splicing patterns and splicing signals in the Drosophila sodium channel gene para. Genetics, 1995, 141(1): 203-214.

[20]Lee S H, Ingles P J, Knipple D C, Soderlund D M. Developmental regulation of alternative exon usage in the house fly Vssc1 sodium channel gene. Invertebrate Neuroscience, 2002, 4(3): 125-133.

[21]Plummer N W, Meisler M H. Evolution and diversity of mammalian sodium channel genes. Genomics, 1999, 57(2): 323-331.

[22]Soderlund D M. Pyrethroids, knockdown resistance and sodium channels. Pest Management Science, 2008, 64(6): 610-616.

[23]Vais H, Williamson M S, Goodson S J, Devonshire A L, Warmk J W, Usherwood P N, Cohen C J. Activation of Drosophila sodium channels promotes modification by deltamethrin. Reductions in affinity caused by knock-down resistance mutations. The Journal of General Physiology, 2000, 115(3): 305-318.

[24]Miyazaki M, Ohyama K, Dunlap D Y, Matsumura F. Cloning and sequencing of the para-type sodium channel gene from susceptible and kdr-resistant German cockroaches (Blattella germanica) and house fly (Musca domestica). Molecular and General Genetics, 1996, 252(1/2): 61-68.

[25]Williamson M S, Martinez-Torres D, Hick C A, Devonshire A L. Identification of mutations in the housefly para-type sodium channel gene associated with knockdown resistance (kdr) to pyrethroid insecticides. Molecular and General Genetics, 1996, 252(1/2): 51-60.

[26]O’Reilly A O, Khambay B P S, Williamson M S, Field L M, Wallace B A, Davies T G E. Modelling insecticide-binding sites in the voltage-gated sodium channel. Biochemical Journal, 2006, 396(2): 255-263.
[1] LIU Jia, ZHOU ShiQi, ZHOU Yan, SHEN GuangMao. Analysis of the Lethal Activity of Serine Carboxypeptidase DmSCBP1 from Dionaea muscipula Against Bactrocera dorsalis [J]. Scientia Agricultura Sinica, 2026, 59(6): 1244-1254.
[2] TENG MengXin, XU Ya, HE Jing, WANG Qi, QIAO Fei, LI JingYang, LI XinGuo. Identification and Functional Analysis of Ca2+-ATPase Gene Family in Banana [J]. Scientia Agricultura Sinica, 2025, 58(7): 1418-1433.
[3] ZHENG YaQin, LIU XueQing, WU SiWen, TANG XiaoYan, YANG DanNi, WANG YongKang, AHMAD Aftab, KHAN Afrsyab, WANG ChengGang, CHEN GuoHu. Cloning and Expression of BcDET2 Gene and Functional of Its Regulatory Effect on Bolting and Flowering in Wucai (Brassica campestris L.) [J]. Scientia Agricultura Sinica, 2025, 58(5): 991-1003.
[4] ZOU PeiYi, LIU MeiYan, WANG Ying, LI RanHong. Cloning and Functional Study of AkNAC2 from Actinidia kolomikta [J]. Scientia Agricultura Sinica, 2025, 58(19): 3985-3999.
[5] ZHANG ShuHong, GAO FengJu, WU QiuYing, JI JingXin, ZHANG YunFeng, XU Ke, GU ShouQin, FAN YongShan. Cloning and Expression Analysis of Heat Shock Protein HSP 9/12 Genes in Setosphaeria turcica [J]. Scientia Agricultura Sinica, 2025, 58(18): 3648-3663.
[6] LÜ ShuWei, TANG Xuan, LI Chen. Research Progress on Seed Shattering of Rice [J]. Scientia Agricultura Sinica, 2025, 58(1): 1-9.
[7] GUAN ZhiLin, JIN FengWei, LIU TingTing, WANG Yi, TAN YingYing, YANG ChunHui, LI RuiTong, WANG Bo, LIU KeDe, DONG Yun. Genetic Analysis and Gene Mapping of Glossy Leaf in Brassica napus [J]. Scientia Agricultura Sinica, 2024, 57(4): 650-662.
[8] ZHANG ShuHong, ZHANG YunFeng, GAO FengJu, WU QiuYing, XU Ke, LI YaZi, LI YanMei, GU ShouQin, FAN YongShan, GONG XiaoDong. Cloning and Expression Analysis of Genes of Small Heat Shock Protein in Setosphaeria turcica [J]. Scientia Agricultura Sinica, 2024, 57(17): 3384-3397.
[9] TANG Wei, ZHANG ChengLing, YANG DongJing, MA JuKui, CHEN JingWei, GAO FangYuan, XIE YiPing, SUN HouJun. Complete Genomic Sequence Characteristics and Establishment of qPCR Detection Technique of Sweet Potato Virus E in China [J]. Scientia Agricultura Sinica, 2023, 56(20): 4010-4020.
[10] GONG QingTao, LI Miao, GAO XiaoLan, ZHANG KunPeng, LI GuiXiang, DONG XiaoMin, LI SuHong, ZHANG AnNing. Screening and Evaluation of Non-Volatile Decision-Making Traits of Oviposition Resistance and Susceptibility of Bactrocera dorsalis [J]. Scientia Agricultura Sinica, 2023, 56(19): 3799-3813.
[11] ZHANG Xin, YANG XingYu, ZHANG ChaoRan, ZHANG Chong, ZHENG HaiXia, ZHANG XianHong. Identification and Expression Analysis of Heat Shock Protein Superfamily Genes in Callosobruchus chinensis [J]. Scientia Agricultura Sinica, 2023, 56(19): 3814-3828.
[12] LI XingXing, ZHOU GuoFu, LUO GuanYu, CHEN SiRong, ZHANG JinLong, CHEN GuoHua, ZHANG XiaoMing. Selection Preference and Adaptability of Bactrocera dorsalis to Different Varieties of Malus pumila [J]. Scientia Agricultura Sinica, 2023, 56(17): 3358-3371.
[13] YANG HuiZhen, YANG Huan, WU ZiXuan, FAN KuoHai, YIN Wei, SUN PanPan, ZHONG Jia, SUN Na, LI HongQuan. Prokaryotic Expression and Metal Binding Characterization of Metallothionein 1A and 2A of Sus scrofa [J]. Scientia Agricultura Sinica, 2023, 56(17): 3461-3478.
[14] SHAO Zhen, DIAO YouXiang. Investigation and Analysis of Nucleic Acid Detection Results of Viral Viruses in Large-Scale Goose Farms [J]. Scientia Agricultura Sinica, 2023, 56(10): 2021-2034.
[15] GU LiDan,LIU Yang,LI FangXiang,CHENG WeiNing. Cloning of Small Heat Shock Protein Gene Hsp21.9 in Sitodiplosis mosellana and Its Expression Characteristics During Diapause and Under Temperature Stresses [J]. Scientia Agricultura Sinica, 2023, 56(1): 79-89.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!