Scientia Agricultura Sinica ›› 2012, Vol. 45 ›› Issue (7): 1257-1264.doi: 10.3864/j.issn.0578-1752.2012.07.003

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Molecular Cloning and Analysis of LeWRKY2 Gene

 SUN  Qing-Peng, LI  Na, YU  Yong-Kun, ZHAO  Fu-Kuan, WAN  Shan-Xia, PAN  Jin-Bao   

  1. 1.北京农学院生物技术学院,北京 102206
    2.北京农学院植物科技学院,北京 102206
  • Received:2011-06-29 Online:2012-04-01 Published:2011-11-25

Abstract: 【Objective】Cloning of WRKY transcription factor from tomato can provide a basis for molecular mechanism of pathogen reaction in tomato. 【Method】 Using RT-PCR and RACE technology, the LeWRKY2 full length cDNA was cloned (GenBank accession: EU755368.1), and its function was predicted by bioinformatics tools. The real-time PCR technology was used to analyze the expression levels of LeWRKY2 gene when treated with JA, Botrytis cinerea and cycloheximide. 【Result】 The LeWRKY2 full length cDNA, consisted of 1 007 bp, was isolated from tomato. The bioinformatics analysis showed that it included an ORF of 471 bp. LeWRKY2 protein contained a WRKY domain and a C2H2 zinc finger motif, and it might have the function of transcription, transcriptional regulation and signal transduction. The LeWRKY2 gene expression levels were proportional to the JA treatment time in the range of 0-60 min, while in the range of 60-150 min, the LeWRKY2 gene expression levels were inversely proportional to the JA treatment time when treated with 100 µmol•L-1 JA. LeWRKY2 gene expression was induced by Botrytis cinerea, and the LeWRKY2 gene expression reached maximum abundance at 4 h. The transcript of LeWRKY2 gene was not dependent on the protein biosynthesis. 【Conclusion】 LeWRKY2 gene is an immediate early gene involved in tomato defense response.

Key words: tomato, gene cloning, LeWRKY gene, jasmonic acid

[1]Eulgem T, Rushton P J, Robatzek S, Somssich I E. The WRKY superfamily of plant transcription factors. Trends in Plant Science, 2000, 5(5): 199-206.

[2]Wu H L, Ni Z F, Yao Y Y, Guo G G, Sun Q X. Cloning and expression profiles of 15 genes encoding WRKY transcription factor in wheat (Triticum aestivem. L). Progress in Natural Science, 2008, 18(6): 697-706.

[3]刘戈宇, 胡鸢雷, 赵  锋, 祝建波, 林中平. 厚叶悬蒴苣苔BcWRKY1转录因子基因的克隆及初步的功能分析. 北京大学学报: 自然科学版, 2007, 43(4): 446-452.

Liu G Y, Hu Y L, Zhao F, Zhu J B, Lin Z P. Molecular cloning of BcWRKY1 transcription factor gene from Boea crassifolia hemsl and its preliminary functional analysis. Acta Scientiarum Naturalium Universitatis Pekinensis: Natural Sciences, 2007, 43(4): 446-452. (in Chinese)

[4]Hofmann M G, Sinha A K, Proels R K, Roitsch T. Cloning and characterization of a novel LpWRKY1 transcription factor in tomato. Plant Physiology and Biochemistry, 2008, 46(5/6): 533-540.

[5]Ciolkowski I, Wanke D, Birkenbihl R, Somssich I. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function. Plant Molecular Biology, 2008, 68(1): 81-92.

[6]Eulgem T, Rushton P J, Schmelzer E, Hahlbrock K, Somssich I E. Early nuclear events in plant defense signaling: rapid gene activation by WRKY transcription factors. The EMBO Journal, 1999, 18: 4689-4699.

[7]Robatzek S, Somssich I E. A new member of the Arabidopsis WRKY transcription factor family, AtWRKY6, is associated with both senescence- and defence-related processes. The Plant Journal, 2001, 28(2): 123-133.

[8]Pandey S P, Somssich I E. The role of WRKY transcription factors in plant immunity. Plant Physiolology, 2009,150(4): 1648-1655.

[9]Ramamoorthy R, Jiang S Y, Kumar N, Venkatesh P N, Ramachandran S. A comprehensive transcriptional profiling of the WRKY gene family in rice under various abiotic and phytohormone treatments. Plant Cell and Physiology, 2008, 49(6): 865-879.

[10]Eulgem T, Somssich I E. Networks of WRKY transcription factors in defense signaling. Current Opinion in Plant Biology, 2007, 10(4): 366-371.

[11]Cai M, Qiu D, Yuan T, Ding X, Li H, Duan L, Xu C, Li X, Wang S. Identification of novel pathogen-responsive cis-elements and their binding proteins in the promoter of OsWRKY13, a gene regulating rice disease resistance. Plant, Cell and Environment, 2008, 31(1): 86-96.

[12]Skibbe M, Qu N, Galis I, Baldwin I T. Induced plant defenses in the natural environment: Nicotiana attenuata WRKY3 and WRKY6 coordinate responses to herbivory. The Plant Cell, 2008, 20(7): 1984-2000.

[13]Pandey S P, Shahi P, Gase K, Baldwin I T. Herbivory-induced changes in the small-RNA transcriptome and phytohormone signaling in Nicotiana attenuata. Proceedings of the National Academy of Sciences of the USA, 2008, 105(12): 4559-4564.

[14]Zhang Z, Wei L, Zou X, Tao Y, Liu Z, Zheng Y. Submergence responsive microRNAs are potentially involved in the regulation of morphological and metabolic adaptations in maize root cells. Annals of Botany, 2008, 102(4): 509-519.

[15]Navarro L, Jay F, Nomura K, He S Y, Voinnet O. Suppression of the microRNA pathway by bacterial effector proteins. Science, 2008, 321(5891): 964-967.

[16]Zhou X, Wang G, Sutoh K, Zhu J K, Zhang W. Identification of cold inducible microRNAs in plants by transcriptome analysis. Biochimica et Biophysica Acta, 2008, 1779(11): 780-788.

[17]Coker J S, Vian A, Davies E.Identification,accumulation,and functional prediction of novel tomato transcripts systemically upregulated after fire damage.Physiology Plant,2005, 124(3): 311-322.

[18]Livak K J, Schmittgen T D. Analysis of relative gene expression data using real-time quantitative PCR and the 2-△△Ct methods. Methods, 2001, 25(4): 402-408.

[19]Jensen L J, Gupta R, Blom N, Devos D, Tamames J, Kesmir C, Nielsen H, Stærfeldt H H, Rapacki K, Workman C, Andersen C A F, Knudsen S, Krogh A, Valencia A, Brunak S. Prediction of human protein function from post-translational modifications and localization features. Journal of Molecular Biology, 2002, 319(5): 1257-1265.

[20]Rushton P J, Torres J T, Parniske M, Wernert P, Hahlbrock K, Somssich I E. Interaction of elicitor-induced DNA-binding proteins with elicitor response elements in the promoters of parsley PR1 genes. The EMBO Journal, 1996, 15(20): 5690-5700.

[21]Eulgem T, Rushton P J, Schmelzer E, Hahlbrock K, Somssich I E. Early nuclear events in plant defence signaling: rapid gene activation by WRKY transcription factors. The EMBO Journal, 1999, 18(17): 4689-4699.

[22]Robatzek S, Somssich I E. A new member of the Arabidopsis WRKY transcription factor family, AtWRKY6, is associated with both senescence- and defence-related processes. The Plant Journal, 2001, 28(2): 123-133.

[23]Johnson C S, Kolevski B, Smyth D R. TRANSPARENT TESTA GLABRA2, a trichome and seed coat development gene of Arabidopsis, encodes a WRKY transcription factor. The Plant Cell, 2002, 14: 1359-1375.

[24]Huang T, Duman J G. Cloning and characterization of a thermal hysteresis (antifreeze) protein with DNA-binding activity from winter bittersweet nightshade, Solanum dulcamara. Plant Molecular Biology, 2002, 48(4): 339-350.

[25]Seki M, Narusaka M, Ishida J, Nanjo J, Fujita M, Oono Y, Kamiya A, Nakajima M, Enju A, Sakurai T, Satou M, Akiyama K, Taji T, Yamaguchi-Shinozaki K, Carninci P, Kawai J, Hayashizaki Y, Shinozaki K. Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray. The Plant Journal, 2002, 31(3): 279-292.

[26]Yamasaki K, Kigawa T, Inoue M, Watanabe S, Tateno M, Seki M, Shinozaki K, Yokoyama S. Structures and evolutionary origins of plant-specific transcription factor DNA-binding domains. Plant Physiology and Biochemistry, 2008, 46(3): 394-401.

[27]李  蕾, 谢丙炎, 戴小枫, 杨宇红.WRKY转录因子及其在植物防御反应中的作用. 分子植物育种, 2005, 3(3): 401-408.

Li L, Xie B Y, Dai X F, Yang Y H. WRKY transcription factors and their roles in plant defense responses. Molecular Plant Breeding, 2005, 3(3): 401-408. (in Chinese)

[28]Fingrut O, Flescher E. Plant stress hormones suppress the proliferation and induce apoptosis in human cancer cells. Leukemia, 2002,16: 608-616.

[29]于涌鲲, 郝玉兰, 万善霞, 赵福宽, 杨瑞楠, 孙清鹏. 茉莉酸类物质的生物合成及其信号转导研究进展. 自然科学进展, 2008, 18(9): 961-967.

Yu Y K, Hao Y L, Wan S X, Zhao F K, Yang R N, Sun Q P. An update on jasmonates biosynthesis and signal transduction. Progress in Natural Science, 2008, 18(9): 961-967. (in Chinese)

[30]Hara K, Yagi M, Kusano T, Sano H. Rapid systemic accumulation of transcripts encoding a tobacco WRKY transcription factor on wounding. Molecular and General Genetics, 2000, 263(1): 30-37.

[31]Ryu H S, Han M, Lee S K, Cho J I, Ryoo N, Heu S, Lee Y H, Bhoo S H, Wang G L, Hahn T R, Jeon J S. A comprehensive expression analysis of the WRKY gene superfamily in rice plants during defense response. Plant Cell Reports, 2006, 25(8): 836-847.

[32]彭喜旭, 胡耀军, 唐新科, 周平兰, 邓小波, 王海华. 茉莉酸和真菌病原诱导的水稻WRKY30转录因子基因的分离及表达特征. 中国农业科学, 2011, 44(12): 2454-2461.

Peng X X, Hu Y J, Tang X K, Zhou P L, Deng X B, Wang H H. Isolation and expression profiles of rice WRKY30 induced by jasmonic acid application and fungal pathogen infection. Scientia Agricultura Sinica, 2011, 44(12): 2454-2461. (in Chinese)

[33]Koornneef A, Pieterse C M J. Cross talk in defense signaling. Plant Physiology, 2008, 146(3): 839-844.

[34]Li J, Brader G, Palva E T. The WRKY70 transcription factor: a node of convergence for jasmonate-mediated and salicylate-mediated signals in plant defense. The Plant Cell, 2004, 16: 319-331.

[35]Xing D H, Lai Z B, Zheng Z Y, Vinod K M, Fan B F, Chen Z X. Stress- and pathogen-induced Arabidopsis WRKY48 is a transcriptional activator that represses plant basal defense. Molecular Plant, 2008, 1(3): 459-470.

[36]Mao P, Duan M, Wei C, Li Y. WRKY62 transcription factor acts downstream of cytosolic NPR1 and negatively regulates jasmonate-responsive gene expression. Plant Cell Physiology, 2007, 48(6): 833-842.

[37]于涌鲲, 王丽芳, 杜希华, 赵福宽, 孙清鹏. LeWRKY1基因的克隆及分析. 植物生理学通讯, 2010, 46(12): 1225-1231.

Yu Y K, Wang L F, Du X H, Zhao F K, Sun Q P. Isolation and analysis of LeWRKY1. Plant Physiology Communication, 2010, 46(12): 1225-1231. (in Chinese)

[38]郝  林, 徐  昕. 植物转录因子WRKY家族的结构和功能. 植物生理学通讯, 2004, 40(2): 260-265.

Hao L, Xu X. The structure and function of WRKY superfamily of plant transcription factors. Plant Physiology Communication, 2004, 40(2): 260-265. (in Chinese)
[1] WANG YuPing, FU Zhi, SUN JiaYing, MU XiaoMeng, LIU HuiLin, GUO JinYun, SONG WenJing, HOU LeiPing, ZHAO HaiLiang. Evaluation of the Mitigating Effect and Application Efficacy of Melatonin Applied at the Seedling Stage on Short-Term Chilling Stress in Tomato Plants [J]. Scientia Agricultura Sinica, 2026, 59(7): 1523-1535.
[2] WU YuanYuan, LÜ ShuWen, ZHANG ZiJun, WANG Tao, ZHANG YiMing, BU LingChao, ZOU QingDao, JIANG Jing. Mixed Major Gene+Polygene Genetic Analysis of Blossom-End Scar Size in Tomato Fruit [J]. Scientia Agricultura Sinica, 2026, 59(5): 1060-1069.
[3] ZHANG Min, LI Xin, ZHANG Yong, ZHONG DePing, LU XiaoXiao, HE ShuMin, CHEN DongHong, LI Ye, LI RongXia, HUANG ZeJun, WANG XiaoXuan, GUO YanMei, DU YongChen, LIU HongHai, LI JunMing, LIU Lei. Genetic and Interaction Analysis of High Soluble Solid Content Loci in Processing Tomato [J]. Scientia Agricultura Sinica, 2025, 58(9): 1816-1829.
[4] TENG MengXin, XU Ya, HE Jing, WANG Qi, QIAO Fei, LI JingYang, LI XinGuo. Identification and Functional Analysis of Ca2+-ATPase Gene Family in Banana [J]. Scientia Agricultura Sinica, 2025, 58(7): 1418-1433.
[5] ZHANG YaFeng, DONG WeiJin, LI QiYun, LU Yang, ZHANG ZhengKun, SUI Li. Effect of Interaction Between Beauveria bassiana and Potassium on Tomato Fruit Quality [J]. Scientia Agricultura Sinica, 2025, 58(6): 1131-1144.
[6] ZHENG YaQin, LIU XueQing, WU SiWen, TANG XiaoYan, YANG DanNi, WANG YongKang, AHMAD Aftab, KHAN Afrsyab, WANG ChengGang, CHEN GuoHu. Cloning and Expression of BcDET2 Gene and Functional of Its Regulatory Effect on Bolting and Flowering in Wucai (Brassica campestris L.) [J]. Scientia Agricultura Sinica, 2025, 58(5): 991-1003.
[7] WANG ShaoHua, SHEN NianQiao, CHU TianRan, WU YongHan, LI KangNing, SHI YanXia, XIE XueWen, LI Lei, FAN TengFei, LI BaoJu, CHAI ALi. Effects of Tomato-Rice Rotation on Physicochemical Properties and Microbial Communities of Soil with Continuous Cropping Obstacles in Cangnan, Zhejiang [J]. Scientia Agricultura Sinica, 2025, 58(4): 692-703.
[8] CAI HaiLin, HUANG XinRong, ZENG WeiAi, PENG ZhiXin, ZHAO AJuan, BO ChunBin, XIANG ShiPeng, GAO PengCheng, ZHANG ChengSheng, ZHAO DongLin. Structure and Herbicidal Activity of 3,5-Dimethylorsellinic Acid-Derived Meroterpenoids from Penicillium sclerotiorum HY5 [J]. Scientia Agricultura Sinica, 2025, 58(22): 4673-4687.
[9] SU XiaoMei, YANG ZongHui, LIU ShuMei, ZHANG ZongJie, LÜ HongJun, HOU LiXia. Development and Application of A KASP Marker-Based Identification System for Tomato Varieties [J]. Scientia Agricultura Sinica, 2025, 58(22): 4746-4756.
[10] GUO MengZe, ZHANG Lei, SUN PingPing, JIANG Biao, YAN JinQiang, LI ZhengNan. Molecular Characterization and Evolutionary Dynamics of Tomato Leaf Curl New Delhi Virus Isolate from Wax Gourd (Benincasa hispida) in Guangdong [J]. Scientia Agricultura Sinica, 2025, 58(19): 3890-3904.
[11] ZOU PeiYi, LIU MeiYan, WANG Ying, LI RanHong. Cloning and Functional Study of AkNAC2 from Actinidia kolomikta [J]. Scientia Agricultura Sinica, 2025, 58(19): 3985-3999.
[12] ZHANG ShuHong, GAO FengJu, WU QiuYing, JI JingXin, ZHANG YunFeng, XU Ke, GU ShouQin, FAN YongShan. Cloning and Expression Analysis of Heat Shock Protein HSP 9/12 Genes in Setosphaeria turcica [J]. Scientia Agricultura Sinica, 2025, 58(18): 3648-3663.
[13] MA Jia, PENG JieLi, WANG Xu, JIA Nan, LI MengKai, HU Dong. Effects of Streptomyces sp. TOR3209 on Chlorophyll Synthesis and Polyamine Content in Tomato Plants Under Low Temperature Stress [J]. Scientia Agricultura Sinica, 2025, 58(15): 3064-3080.
[14] LI XiaoYan, DU YaDan, HU XiaoTao, LU YiNing, GU XiaoBo. The Influence of Nitrogen Application Under Aerated Drip Irrigation on the Hydraulic Characteristics and Photosynthetic Capacity of Tomato [J]. Scientia Agricultura Sinica, 2025, 58(11): 2225-2238.
[15] LÜ ShuWei, TANG Xuan, LI Chen. Research Progress on Seed Shattering of Rice [J]. Scientia Agricultura Sinica, 2025, 58(1): 1-9.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!