Scientia Agricultura Sinica ›› 2019, Vol. 52 ›› Issue (5): 786-800.doi: 10.3864/j.issn.0578-1752.2019.05.002
• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles Next Articles
HUANG ShengCai1,WANG Bing1,XIE GuoQiang2,LIU ZhongLai2,ZHANG MeiJuan1,ZHANG ShuQing1(),CHENG XianGuo1(
)
[1] |
SPIELMEYER W, ELLIS M H, CHANDLER P M . Semidwarf (sd-1), “green revolution” rice, contains a defective gibberellin 20-oxidase gene. Proceedings of the National Academy of Sciences of the United States of America, 2002,99(13):9043-9048.
doi: 10.1073/pnas.132266399 |
[2] |
PENG J, RICHARDS D E, HARTLEY N M, MURPHY G P, DEVOS K M, FLINTHAM J E, BEALES J, FISH L J, WORLAND A J, PELICA F . ‘Green revolution’ genes encode mutant gibberellin response modulator. Nature, 1999,400:256-261.
doi: 10.1038/22307 |
[3] |
YAMAMURO C, IHARA Y, WU X, NOGUCHI T, FUJIOKA S, TAKATSUTO S, ASHIKARI M, KITANO H, MATSUOKA M . Loss of function of a rice brassinosteroid insensitive 1 homolog prevents internode elongation and bending of the lamina joint. The Plant Cell, 2000,12:1591-1606.
doi: 10.2307/3871176 pmid: 11006334 |
[4] | HONG Z, UEGUCHI-TANAKA M, FUJIOKA S, TAKATSUTO S, YOSHIDA S, HASEGAWA Y, ASHIKARI M, KITANOH, MATSUOKA M . The Rice brassinosteroid-deficient dwarf2 mutant defective in the rice homolog of Arabidopsis DIMINUTO/DWARF1, is rescued by the endogenously accumulated alternative bioactive brassinosteroid, dolichosterone. The Plant Cell , 2005,17:2243-2254. |
[5] |
ARITE T, IWATA H, OHSHIMA K, MAEKAWA M, NAKAJIMA M, KOJIMA M, SAKAKIBARA H, KYOZUKA J . DWARF10, an RMsI/MAX4/DAD1 ortholog, controls lateral bud out-growth in rice. The Plant Journal, 2007,51(6):1019-1029.
doi: 10.1111/j.1365-313X.2007.03210.x pmid: 17655651 |
[6] |
ISHIKAWA S, MAEKAWA M, ARITE T, ONISHI K, TAKAMURE I, KYOZUKA J . Suppression of tiller bud activity in tillering dwarf mutants of rice. Plant Cell Physiology, 2005,46(1):79-86.
doi: 10.1093/pcp/pci022 pmid: 15659436 |
[7] |
FLEET C M, SUN T P . A DELLAcate balance: the role of gibberellin in plant morphogenesis. Current Opinion in Plant Biology, 2005,8(1):77-85.
doi: 10.1016/j.pbi.2004.11.015 pmid: 15653404 |
[8] |
谈心, 马欣荣 .赤霉素生物合成途径及其相关研究进展. 应用与环境生物学报, 2008,14(4):571-577.
doi: 10.3321/j.issn:1006-687X.2008.04.028 |
TAN X, MA X R . Advance in research of gibberellin biosynthesis pathway. Chinese Journal of Applied and Environmental Biology , 2008,14(4):571-577. (in Chinese)
doi: 10.3321/j.issn:1006-687X.2008.04.028 |
|
[9] |
THOMAS S G, SUN T P . Update on gibberellin signaling. A tale of the tall and the short. Plant Physiology, 2004,135:668-676.
doi: 10.1104/pp.104.040279 |
[10] | YAMAGUCHI S, SUN T P, KAWAIDE H, KAMIYA Y . The GA2 locus of Arabidopsis thaliana encodes ent-kaurene synthase of gibberellin biosynthesis. Plant Physiology , 1998,116:1271-1278. |
[11] |
HELLIWELL CA, POOLE A, PEACOCK W J, DENNIS E S .Arabidopsis ent-kaurene oxidase catalyzes three steps of gibberellin biosynthesis. Plant Physiology , 1999,119(2):507-510.
doi: 10.1104/pp.119.2.507 pmid: 9952446 |
[12] |
MARGIS-PINHEIRO M, ZHOU X R, ZHU Q H, DENNIS E S, UPADHYAYA N M . Isolation and characterization of a Ds-tagged rice (Oryza sativa L.) GA-responsive dwarf mutant defective in an early step of the gibberellin biosynthesis pathway. Plant Cell Reports , 2005,23(12):19-33.
doi: 10.1007/s00299-004-0896-6 pmid: 15668792 |
[13] |
ITOH H, TATSUMI T, SAKAMOTO T, OTOMO K, TOYOMASU T, KITANO H, ASHIKARI M, ICHIHARA S, MATSUOKA M . A rice semi-dwarf gene, Tan-ginbozu (D35), encodes the gibberellin biosynthesis enzyme, ent-kaurene oxidase. Plant Molecular Biology, 2004,54(4):533-547.
doi: 10.1023/B:PLAN.0000038261.21060.47 |
[14] |
UEGUCHI-TANAKA M, ASHIKARI M, NAKAJIMA M, ITOH H, KATOH E, KOBAYASHI M, CHOW TY, HSING YI, KITANO H, YAMAGUCHI I, MATSUOKA M . GIBBERELLIN INSENSITIVE DWARF1 encodes a soluble receptor for gibberellin. Nature, 2005,437(7059):693-698.
doi: 10.1038/nature04028 pmid: 16193045 |
[15] |
GOMI K, SASAKI A, ITOH H, UEGUCHI-TANAKA M, ASHIKARI M, KITANO H, MATSUOKA M . GID2, an F-box subunit of the SCF E3 complex, specifically interacts with phosphorylated SLR1 protein and regulates the gibberellin-dependent degradation of SLR1 in rice. The Plant Journal, 2004,37(4):626-634.
doi: 10.1111/j.1365-313X.2003.01990.x pmid: 14756772 |
[16] |
SUN T P . Gibberellin-GID1-DELLA: A pivotal regulatory module for plant growth and development. Plant Physiology, 2010,154(2):567-570.
doi: 10.1104/pp.110.161554 pmid: 20921186 |
[17] | 尹昌喜 .细胞质雄性不育水稻包穗的激素调控[D].南京: 南京农业大学, 2007: 6. |
YIN C X .Plant hormone regulation on panicle enclosure in cytoplasmic male sterile rice[D].Nanjing: Nanjing Agricultural University, 2007: 6. (in Chinese) | |
[18] | 张玲 .水稻矮化并花发育异常突变体dwarf and deformed flower 2 (ddf2 )的基因定位与候选基因分析[D].重庆: 西南大学, 2015: 6. |
ZHANG L .Gene mapping and candidate gene analysis of dwarf and deformed flower 2 (ddf2 )mutants in rice (Oryza sativa )[D].Chongqing: Southwestern University, 2015: 6. (in Chinese) | |
[19] | WANG Y P, TANG S Q, WU Z F, SHI Q H, WU Z M . Phenotypic analysis of a dwarf and deformed flower 3 (ddf3 ) mutant in rice( Oryza sativa L.) and characterization of candidate genes. Journal of Integrative Agriculture , 2018,5(17):1057-1065. |
[20] |
SOREFAN K, BOOKER J, HAUROGNÉ K, GOUSSOT M, BAINBRIDGE K, FOO E, CHATFIELD S, WARD S, BEVERIDGE C, RAMEAU C, LEYSER O . MAX4 and RMS1 are orthologous dioxygenase-like genes that regulate shoot branching in Arabidopsis and pea. Genes & Development , 2003,17:1469-1474.
doi: 10.1101/gad.256603 pmid: 12815068 |
[21] |
JIANG L, LIU X, XIONG G, LIU H, CHEN F, WANG L, MENG X, LIU G, YU H, YUAN Y, YI W, ZHAO L, MA H, HE Y, WU Z, MELCHER K, QIAN Q, XU H E, WANG Y, LI J . DWARF 53 acts as a repressor of strigolactone signalling in rice. Nature, 2013,504(7480):401-405.
doi: 10.1038/nature12870 pmid: 24336200 |
[22] |
YOUNG M D, WAKEFIELD M J, SMYTH G K, OSHLACK A . Gene ontology analysis for RNA-seq: Accounting for selection bias. Genome Biology, 2010,11(2):R14.
doi: 10.1186/gb-2010-11-2-r14 pmid: 20132535 |
[23] |
KANEHISA M, ARAKI M, GOTO S, HATTORI M, HIRAKAWA M, ITOH M, KATAYAMA T, KAWASHIMA S, OKUDA S, TOKIMATSU T, YAMANISHI Y . KEGG for linking genomes to life and the environment. Nucleic Acids Research, 2008,36:D480-D484.
doi: 10.1093/nar/gkm882 pmid: 18077471 |
[24] |
MAGOME H, NOMURA T, HANADA A, TAKEDA-KAMIYA N, OHNISHI T, SHINMA Y, KATSUMATA T, KAWAIDE H, KAMIYA Y, YAMAGUCHI S . CYP714B1 and CYP714B2 encode gibberellin 13-oxidases that reduce gibberellin activity in rice. Proceedings of the National Academy of Sciences of the United States of America, 2013,110(5):1947-1952.
doi: 10.1073/pnas.1215788110 pmid: 23319637 |
[25] |
ITO S, YAMAGAMI D, ASAMI T . Effects of gibberellin and strigolactone on rice tiller bud growth. Journal of Pesticide Science, 2018,43(3):220-223.
doi: 10.1584/jpestics.D18-013 |
[26] | ZOU J, ZHANG S, ZHANG W, LI G, CHEN Z, ZHAI W, ZHAO X, PAN X, XIE Q, ZHU L . The rice HIGH-TILLERING DWARF1 encoding an ortholog of Arabidopsis MAX3 is required for negative regulation of the outgrowth of axillary buds. The Plant Journal , 2006,48:687-698. |
[27] |
NAKAMURA H, XUE Y L, MIYAKAWA T, HOU F, QIN H M, FUKUI K, SHI X, ITO E, ITO S, PARK S H, MIYAUCHI Y, ASANO A, TOTSUKA N, UEDA T, TANOKURA M, ASAMI T. Molecular mechanism of strigolactone perception by DWARF14. Nature Publishing Group, 2013,4:2613.
doi: 10.1038/ncomms3613 pmid: 24131983 |
[28] |
KIM S K, PARK H Y, JANG Y H, LEE K C, CHUNG Y S, LEE J H, KIM J K . OsNF-YC2 and OsNF-YC4 proteins inhibit flowering under long-day conditions in rice. Planta, 2016,243(3):563-576.
doi: 10.1007/s00425-015-2426-x pmid: 26542958 |
[29] |
ITOH H, UEGUCHI-TANAKA M, SENTOKU N, KITANO H, MATSUOKA M, KOBAYASHI M . Cloning and functional analysis of two gibberellin 3β-hydroxylase genes that are differently expressed during the growth of rice. Proceedings of the National Academy of Sciences of the United States of America, 2001,98(15):8909-8914.
doi: 10.1073/pnas.141239398 |
[30] |
LO S F, YANG S Y, CHEN K T, HSING YI, ZEEVAART JA, CHEN L J, YU S M . A novel class of gibberellin 2-oxidases control semidwarfism, tillering, and root development in rice. The Plant Cell, 2008,20(10):2603-2618.
doi: 10.1105/tpc.108.060913 |
[31] |
PETER H, VALERIE S . A century of gibberellin research. Journal of Plant Growth Regulation, 2015,34:740-760.
doi: 10.1007/s00344-015-9546-1 pmid: 4622167 |
[32] |
COWLING R J, KAMIYA Y, SETO H, HARBERD N P . Gibberellin dose-response regulation of GA4 gene transcript levels in Arabidopsis . Plant Physiology , 1998,117(4):1195-1203.
doi: 10.1104/pp.117.4.1195 pmid: 9701576 |
[33] |
TALON M, KOORNNEEF M, ZEEVAART J A . Endogenous gibberellins in Arabidopsis thaliana and possible steps blocked in the biosynthetic pathways of the semidwarf GA4 and GA5 mutants. Proceedings of the National Academy of Sciences of the United States of America , 1990,87(20):7983-7987.
doi: 10.1073/pnas.87.20.7983 pmid: 2236013 |
[34] |
UEGUCHI-TANAKA M, NAKAJIMA M, KATOH E, OHMIYA H, ASANO K, SAJI S, HONGYU X, ASHIKARI M, KITANO H, YAMAGUCHI I, MATSUOKA M . Molecular interactions of a soluble gibberellin receptor, GID1, with a rice DELLA protein, SLR1, and gibberellin. The Plant Cell, 2007,19(7):2140-2155.
doi: 10.1105/tpc.106.043729 pmid: 17644730 |
[35] |
ZHANG Z L, XIE Z, ZOU X, CASARETTO J, HO T H, SHEN Q J . A rice WRKY gene encodes a transcriptional repressor of the gibberellin signaling pathway in aleurone cells. Plant Physiology, 2004,134(4):1500-1513.
doi: 10.1104/pp.103.034967 pmid: 15047897 |
[36] |
ZHANG Z L, SHIN M, ZOU X, HUANG J, HO T H, SHEN Q J . A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells. Plant Molecular Biology, 2009,70(1/2):139-151.
doi: 10.1007/s11103-009-9463-4 pmid: 19199048 |
[37] |
GUO X, HOU X, FANG J, WEI P, XU B, CHEN M, FENG Y, CHU C . The rice GERMINATION DEFECTIVE 1, encoding a B3 domain transcriptional repressor, regulates seed germination and seedling development by integrating GA and carbohydrate metabolism. The Plant Journal, 2013,75(3):403-416.
doi: 10.1111/tpj.2013.75.issue-3 |
[38] |
HEINRICH M, HETTENHAUSEN C, LANGE T , WÜNSCHE H, FANG J, BALDWIN I T, WU J. High levels of jasmonic acid antagonize the biosynthesis of gibberellins and inhibit the growth of Nicotiana attenuata stems. The Plant Journal , 2013,73(4):591-606.
doi: 10.1111/tpj.12058 pmid: 23190261 |
[39] |
ITO Y, KURATA N . Identification and characterization of cytokinin-signalling gene families in rice. Gene, 2006,382:57-65.
doi: 10.1016/j.gene.2006.06.020 pmid: 16919402 |
[40] |
SANTI L, WANG Y, STILE M R, BERENDZEN K, WANKE D, ROIG C, POZZI C MÜLLER K,MÜLLER J,ROHDE W,SALAMINI F,. The GA octodinucleotide repeat binding factor BBR participates in the transcriptional regulation of the homeobox gene Bkn3. The Plant Journal, 2003,34(6):813-826.
doi: 10.1046/j.1365-313X.2003.01767.x pmid: 12795701 |
[41] |
WU C, YOU C, LI C, LONG T, CHEN G, BYRNE M E, ZHANG Q . RID1, encoding a Cys2/His2-type zinc finger transcription factor, acts as a master switch from vegetative to floral development in rice. Proceedings of the National Academy of Sciences of the United States of America, 2008,105(35):12915-12920.
doi: 10.1073/pnas.0806019105 |
[42] | LIJAVETZKY D, CARBONERO P, VICENTE-CARBAJOSA J . Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families. BMC Evolutionary Biology , 2003,1:17. |
[43] | MAO C, WANG S, JIA Q, WU P . OsEIL1, a rice homolog of the Arabidopsis EIN3 regulates the ethylene response as a positive component. Plant Molecular Biology , 2006,61(1):141-152. |
[44] |
HIRAGA S, SASAKI K, HIBI T, YOSHIDA H, UCHIDA E, KOSUGI S, KATO T, MIE T, ITO H, KATOU S, SEO S, MATSUI H, OHASHI Y, MITSUHARA I . Involvement of two rice ETHYLENE INSENSITIVE3-LIKE genes in wound signaling. Molecular Genetics and Genomics, 2009,282(5):517-529.
doi: 10.1007/s00438-009-0483-1 pmid: 19798512 |
[45] | RICE CHROMOSOMES 11 AND 12 SEQUENCING CONSORTIA. The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications. BMC Biology, 2005,3:20. |
[46] |
KIRIK V, BAUMLEIN H . A novel leaf-specific MYB-related protein with a single binding repeat. Gene, 1996,183(1/2):109-113.
doi: 10.1016/S0378-1119(96)00521-5 pmid: 8996094 |
[47] |
LI W Q, WU J G, WENG S L, ZHANG Y, ZHANG D, SHI C . Identification and characterization of dwarf 62, a loss-of-function mutation in DLT/OsGRAS-32 affecting gibberellin metabolism in rice. Planta, 2010,232(6):1383-1396.
doi: 10.1007/s00425-010-1263-1 pmid: 20830595 |
[48] |
UMEHARA M, HANADA A, YOSHIDA S, AKIYAMA K, ARITE T, TAKEDA-KAMIYA N, MAGOME H, KAMIYA Y, SHIRASU K, YONEYAMA K, KYOZUKA J, YAMAGUCHI S . Inhibition of shoot branching by new terpenoid plant hormones. Nature, 2008,455(7210):195-200.
doi: 10.1038/nature07272 pmid: 18690207 |
[49] |
ITO S, YAMAQAMI D, UMEHARA M, HANADA A, YOSHIDA S, SASAKI Y, YAJIMA S, KYOZUKA J, UEGUCHI-TANAKA M, MATSUOKA M, SHIRASU K, YAMAGUCHI S, ASAMI T . Regulation of strigolactone biosynthesis by gibberellin signaling. Plant Physiology, 2017,174(2):1250-1259.
doi: 10.1104/pp.17.00301 pmid: 28404726 |
[1] | XIAO DeShun, XU ChunMei, WANG DanYing, ZHANG XiuFu, CHEN Song, CHU Guang, LIU YuanHui. Effects of Rhizosphere Oxygen Environment on Phosphorus Uptake of Rice Seedlings and Its Physiological Mechanisms in Hydroponic Condition [J]. Scientia Agricultura Sinica, 2023, 56(2): 236-248. |
[2] | ZHANG XiaoLi, TAO Wei, GAO GuoQing, CHEN Lei, GUO Hui, ZHANG Hua, TANG MaoYan, LIANG TianFeng. Effects of Direct Seeding Cultivation Method on Growth Stage, Lodging Resistance and Yield Benefit of Double-Cropping Early Rice [J]. Scientia Agricultura Sinica, 2023, 56(2): 249-263. |
[3] | ZHANG Wei,YAN LingLing,FU ZhiQiang,XU Ying,GUO HuiJuan,ZHOU MengYao,LONG Pan. Effects of Sowing Date on Yield of Double Cropping Rice and Utilization Efficiency of Light and Heat Energy in Hunan Province [J]. Scientia Agricultura Sinica, 2023, 56(1): 31-45. |
[4] | FENG XiangQian,YIN Min,WANG MengJia,MA HengYu,CHU Guang,LIU YuanHui,XU ChunMei,ZHANG XiuFu,ZHANG YunBo,WANG DanYing,CHEN Song. Effects of Meteorological Factors on Quality of Late Japonica Rice During Late Season Grain Filling Stage Under ‘Early Indica and Late Japonica’ Cultivation Pattern in Southern China [J]. Scientia Agricultura Sinica, 2023, 56(1): 46-63. |
[5] | SANG ShiFei,CAO MengYu,WANG YaNan,WANG JunYi,SUN XiaoHan,ZHANG WenLing,JI ShengDong. Research Progress of Nitrogen Efficiency Related Genes in Rice [J]. Scientia Agricultura Sinica, 2022, 55(8): 1479-1491. |
[6] | GUI RunFei,WANG ZaiMan,PAN ShengGang,ZHANG MingHua,TANG XiangRu,MO ZhaoWen. Effects of Nitrogen-Reducing Side Deep Application of Liquid Fertilizer at Tillering Stage on Yield and Nitrogen Utilization of Fragrant Rice [J]. Scientia Agricultura Sinica, 2022, 55(8): 1529-1545. |
[7] | LIAO Ping,MENG Yi,WENG WenAn,HUANG Shan,ZENG YongJun,ZHANG HongCheng. Effects of Hybrid Rice on Grain Yield and Nitrogen Use Efficiency: A Meta-Analysis [J]. Scientia Agricultura Sinica, 2022, 55(8): 1546-1556. |
[8] | HAN XiaoTong,YANG BaoJun,LI SuXuan,LIAO FuBing,LIU ShuHua,TANG Jian,YAO Qing. Intelligent Forecasting Method of Rice Sheath Blight Based on Images [J]. Scientia Agricultura Sinica, 2022, 55(8): 1557-1567. |
[9] | GAO JiaRui,FANG ShengZhi,ZHANG YuLing,AN Jing,YU Na,ZOU HongTao. Characteristics of Organic Nitrogen Mineralization in Paddy Soil with Different Reclamation Years in Black Soil of Northeast China [J]. Scientia Agricultura Sinica, 2022, 55(8): 1579-1588. |
[10] | ZHU DaWei,ZHANG LinPing,CHEN MingXue,FANG ChangYun,YU YongHong,ZHENG XiaoLong,SHAO YaFang. Characteristics of High-Quality Rice Varieties and Taste Sensory Evaluation Values in China [J]. Scientia Agricultura Sinica, 2022, 55(7): 1271-1283. |
[11] | ZHAO Ling, ZHANG Yong, WEI XiaoDong, LIANG WenHua, ZHAO ChunFang, ZHOU LiHui, YAO Shu, WANG CaiLin, ZHANG YaDong. Mapping of QTLs for Chlorophyll Content in Flag Leaves of Rice on High-Density Bin Map [J]. Scientia Agricultura Sinica, 2022, 55(5): 825-836. |
[12] | JIANG JingJing,ZHOU TianYang,WEI ChenHua,WU JiaNing,ZHANG Hao,LIU LiJun,WANG ZhiQin,GU JunFei,YANG JianChang. Effects of Crop Management Practices on Grain Quality of Superior and Inferior Spikelets of Super Rice [J]. Scientia Agricultura Sinica, 2022, 55(5): 874-889. |
[13] | ZHANG YaLing, GAO Qing, ZHAO Yuhan, LIU Rui, FU Zhongju, LI Xue, SUN Yujia, JIN XueHui. Evaluation of Rice Blast Resistance and Genetic Structure Analysis of Rice Germplasm in Heilongjiang Province [J]. Scientia Agricultura Sinica, 2022, 55(4): 625-640. |
[14] | WANG YaLiang,ZHU DeFeng,CHEN RuoXia,FANG WenYing,WANG JingQing,XIANG Jing,CHEN HuiZhe,ZHANG YuPing,CHEN JiangHua. Beneficial Effects of Precision Drill Sowing with Low Seeding Rates in Machine Transplanting for Hybrid Rice to Improve Population Uniformity and Yield [J]. Scientia Agricultura Sinica, 2022, 55(4): 666-679. |
[15] | CHEN TingTing, FU WeiMeng, YU Jing, FENG BaoHua, LI GuangYan, FU GuanFu, TAO LongXing. The Photosynthesis Characteristics of Colored Rice Leaves and Its Relation with Antioxidant Capacity and Anthocyanin Content [J]. Scientia Agricultura Sinica, 2022, 55(3): 467-478. |
|