Scientia Agricultura Sinica ›› 2017, Vol. 50 ›› Issue (16): 3063-3070.doi: 10.3864/j.issn.0578-1752.2017.16.001

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS •     Next Articles

Molecular Regulation Mechanism of Leaf Development Mediated by Ath-miR169d in Arabidopsis thaliana

ZHANG Min1, ZHU Ming1,2, LI WenZong1, MA Jie3, LIU YuePing3, JIANG HaiYang2, WANG Lei1, XU MiaoYun1   

  1. 1Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081; 2School of Life Sciences, Anhui Agricultural University, Hefei 230036; 3Colloge of Biological Science and Engineering, Beijing University of Agriculture, Beijing 102206
  • Received:2017-02-13 Online:2017-08-16 Published:2017-08-16

Abstract: 【Objective】The aims of this study are 1) to analyze the role of ath-miR169d in the progress of leaf development in Arabidopsis, 2) to illuminate the mechanisms of molecular regulation mediated by ath-miR169d, and 3) to provide a new insight into improving the photosynthetic performance and the genetic engineering of vegetables biomass and crop productivity.【Method】Ath-miR169d over-expression transgenic plants, STTM ath-miR169d knockdown transgenic plants, and WT plants were grown in a controlled culture room at 22℃ with a relative humidity of 60% and 16 h/8 h photoperiod. Number and size of rosette leaf were measured; pmiR169d::GUS vector were constructed and transformed into Agrobacterium tumefaciens EHA105, and then infected the buds of wildtype Arabidopsis (Columbia, Col-0), the pmiR169d::GUS transgenic Arabidopsis plants were used to observe the expression profile of ath-miR169d in different organs and tissues by GUS staining method. Using 8-week-old seedlings of ath-miR169d over-expressing transgenic Arabidopsis thaliana and wild type plants as materials, morphology of leaf epidemic cells were observed by scanning electron microscope (SEM). Whole shoots were harvested from 4-week-old seedlings of ath-miR169d over-expressing transgenic A. thaliana and wild type plants, subsequently the total endogenous IAA were detected and quantified as methyl esters by gas chromatography-mass spectroscopy (GC-MS). The mRNA expression profiles were detected by microarray analysis to screen differentially expressed genes. The expression of key genes in plant auxin signal pathway were verified by real-time fluorescent quantitative PCR (RT-qPCR). 【Result】In contrast to WT, ath-miR169d overexpression plants exhibited fewer and smaller rosettes, STTM ath-miR169d knockdown plants showed more and larger rosettes. Moreover, STTM ath-miR169d plants could generate new rosette leaves incessantly even after bolting and seeds harvest, whereas the leaves of ath-miR169d overexpression and WT plants generally decayed after harvest. The epidermal cells in the leaves of ath-miR169d over-expression plants were smaller than that in the WT leaves by SEM detection. Ath-miR169d was highly expressed in SAM and leaf vasculature, and expression profile was stronger in new leaves than in old ones. Endogenous IAA content reduced by 38.6% in ath-miR169d over-expressing plants compared to wild-type plants, showing Ath-miR169d was potentially involved in auxin signal pathway by microarray analysis. The auxin biosynthesis gene YUC2 and transporter gene PIN1 were downregulated in ath-miR169d over-expressing plants whereas, auxin response factors 1 and 2 (ARF1 and ARF2) genes were upregulated. Expression profile of YUC2, PIN1, ARF1 and ARF2 in STTM miR169d plantswere opposite to over-expressing plants. 【Conclusion】Results of the experiment showed that the leaf development was regulated by ath-miR169d through the auxin-signaling pathway. Number and size of rosette could be alerted by ath-miR169d expression level, and further affected biomass of the whole plant.

Key words: Arabidopsis, miR169, leaf, development, auxin signaling pathway

[1]    MOON J, HAKE S. How a leaf gets its shape. Current Opinion in Plant Biology, 2011, 14(1): 24-30.
[2]    RUBIO-SOMOZA I, ZHOU C M, CONFRARIA A, MARTINHO C, VON BORN P, BAENA-Gonzalez E, Wang J W, Weigel D. Temporal control of leaf complexity by miRNA-regulated licensing of protein complexes. Current Opinion in Plant Biology, 2014, 24(22): 2714-2719.
[3]    Mallory A C, Bartel D P, Bartel B. MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes. The Plant Cell, 2005, 17(5): 1360-1375.
[4]    Wang J W, Wang L J, Mao Y B, Cai W J, Xue H W, Chen X Y. Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis. The Plant Cell, 2005, 17(8): 2204-2216.
[5]    Liu P P, Montgomery T A, Fahlgren N, Kasschau K D, Nonogaki H, Carrington J C. Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stages. The Plant Journal, 2007, 52(1): 133-146.
[6]    Mallory A C, Dugas D V, Bartel D P, Bartel B. MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs. Current Biology,2004, 14(2):1035-1046.
[7]    Sieber P, Wellmer F, Gheyselinck J, Riechmann J L, Meyerowitz E M. Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness. Development,2007, 134(6): 1051-1060.
[8]    Palatnik J F,Allen E Wu X, Schommer C, Schwab R, Carrington J C, Weigel D.Control of leaf morphogenesis by microRNAs. Nature, 2003, 425(6955): 257-263.
[9]    Ori N, Cohen A R, Etzioni A, Brand A, Yanai O, Shleizer S, Menda N, Amsellem Z, Efroni I, Pekker I, Alvarez J P, Blum E, Zamir D, Eshed Y. Regulation of LANCEOLATE by miR319 is required for compound-leaf development in tomato. Nature Genetics, 2007, 39(6): 787-791.
[10]   Millner P A,Cohen A R, Etzioni A, Brand A, Yanai O, Shleizer S, Menda N, Amsellem Z, Efroni I, Pekker I, Alvarez J P, Blum E, Zamir D, Eshed Y. The auxin signal. Current Opinion in Plant Biology, 1995, 39(6): 224-231.
[11]   Chandler J W. Local auxin production: a small contribution to a big field. Bioessays, 2009, 31(1): 60-70.
[12]   Won C, Shen X, Mashiguchi K, Zheng Z, Dai X, Cheng Y, Kasahara H, Kamiya Y, Chory J, Zhao Y. Conversion of tryptophan to indole-3-acetic acid by TRYPTOPHAN AMINOTRANSFERASES OF ARABIDOPSIS and YUCCAs in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America, 2011, 108(45): 18518-18523.
[13]   Friml J, Benkova E, Mayer U, Palme K, Muster G. Automated whole mount localisation techniques for plant seedlings. The Plant Journal, 2003, 34(1): 115-124.
[14]   Gonzalez-Ibeas D, Blanca J, Donaire L, Saladié M, Mascarell Creus A, Cano Delgado A, Garcia Mas J, Llave C, Aranda M A. Analysis of the melon (Cucumis melo) small RNAome by high-throughput pyrosequencing. BMC Genomics, 2011, 12: 393.
[15]   Rhoades M W, Reinhart B J, Lim LP, Burge C B, Bartel B, Bartel D P. Prediction of plant microRNA targets. Cell, 2002, 110(4): 513-520.
[16]   Lotan T, Ohto M, Yee K M, West M A, Lo R, Kwong R W, Yamagishi K, Fischer R L, Goldberg R B, Harada J J. Arabidopsis LEAFY COTYLEDON1 is sufficient to induce embryo development in vegetative cells. Cell, 1998, 93(7): 1195-1205.
[17]   Combier J P, Frugier F d e, Billy F, Boualem A, El-Yahyaoui F, Moreau S, Vernié T, Ott T, Gamas P, Crespi M, Niebel A. MtHAP2-1 is a key transcriptional regulator of symbiotic nodule development regulated by microRNA169 in Medicago truncatula. Genes and Development, 2006, 20(22): 3084-3088.
[18]   Wenkel S,Turck F, Singer K, Gissot L, Le Gourrierec J, Samach A, Coupland G. CONSTANS and the CCAAT box binding complex share a functionally important domain and interact to regulate flowering of Arabidopsis. The Plant Cell, 2006, 18(11): 2971-2984.
[19]   Warpeha K M, Upadhyay S, Yeh J, Adamiak J, Hawkins S I, Lapik Y R, Anderson M B, Kaufman L S. The GCR1, GPA1, PRN1, NF-Y signal chain mediates both blue light and abscisic acid responses in Arabidopsis. Plant Physiology, 2007, 143(4): 1590-1600.
[20]   Nelson D E, Repetti P P, Adams T R, Creelman R A, Wu J, Warner D C, Anstrom D C, Bensen R J, Castiglioni P P, Donnarummo M G, Hinchey B S, Kumimoto R W, Maszle D R, Canales R D, Krolikowski K A, Dotson S B, Gutterson N, Ratcliffe O J, Heard J E. Plant nuclear factor Y (NF-Y) B subunits confer drought tolerance and lead to improved corn yields on water-limited acres. Proceedings of the National Academy of Sciences of the United States of America, 2007, 104(42): 16450-16455.
[21]   Li W X, Oono Y, Zhu J, He X J, Wu J M, Iida K, Lu X Y, Cui X, Jin H, Zhu J K. The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance. The Plant Cell, 2008, 20: 2238-2251.
[22]   Liu J X, Howell S H. bZIP28 and NF-Y transcription factors are activated by ER stress and assemble into a transcriptional complex to regulate stress response genes in Arabidopsis. The Plant Cell, 2010, 22: 782-796.
[23]   Xu M Y, Zhang L, Li W W, Hu X L, Wang M B, Fan Y L, Zhang C Y, Wang L. Stress-induced early flowering is mediated by miR169 in Arabidopsis thaliana. Journal of Experimental Botany, 2014, 65: 89-101.
[24]   Sorin C, Declerck M, Christ A, Blein T, Ma L, Lelandais-Brière C, Njo M F, Beeckman T, Crespi M, Hartmann C. A miR169 isoform regulates specific NF-YA targets and root architecture in Arabidopsis. New Phytologist, 2014, 202: 1197-1211.
[25]   Yan J, Gu Y, Jia X, Kang W, Pan S, Tang X, Chen X, Tang G. Effective small RNA destruction by the expression of a short tandem target mimic in Arabidopsis. The Plant Cell, 2012, 24(2): 415-427.
[26]   Jefferson R A, Kavanagh T A, Bevan M W. GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. The EMBO journal, 1987, 6(13): 3901-3907.
[27]   Livak K J, Schmittgen T D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods, 2001, 25(4): 402-408.
[28]   Ellis C M, Nagpal P, Young J C, Hagen G, Guilfoyle T J, Reed J W. AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana. Development, 2005, 132(20): 4563-4574.
[29]   Combier J P, de Billy F, Gamas P, Niebel A Rivas S. Trans-regulation of the expression of the transcription factor MtHAP2-1 by a uORF controls root nodule development. Genes and development, 2008, 22: 1549-1559.
[30]   Woo J, MacPherson C R, Liu J, Wang H, Kiba T, Hannah M A, Wang X J, Bajic V B, Chua N H. The response and recovery of the Arabidopsis thaliana transcriptome to phosphate starvation. BMC plant biology, 2012, 12: 62.
[31]   Lavy M, Estelle M. Mechanisms of auxin signaling. Development, 2016, 143(18): 3226-3229.
[1] LI YiLing,PENG XiHong,CHEN Ping,DU Qing,REN JunBo,YANG XueLi,LEI Lu,YONG TaiWen,YANG WenYu. Effects of Reducing Nitrogen Application on Leaf Stay-Green, Photosynthetic Characteristics and System Yield in Maize-Soybean Relay Strip Intercropping [J]. Scientia Agricultura Sinica, 2022, 55(9): 1749-1762.
[2] WU Yan,ZHANG Hao,LIANG ZhenHua,PAN AiLuan,SHEN Jie,PU YueJin,HUANG Tao,PI JinSong,DU JinPing. circ-13267 Regulates Egg Duck Granulosa Cells Apoptosis Through Let-7-19/ERBB4 Pathway [J]. Scientia Agricultura Sinica, 2022, 55(8): 1657-1666.
[3] WANG Miao,ZHANG Yu,LI RuiQiang,XIN XiaoPing,ZHU XiaoYu,CAO Juan,ZHOU ZhongYi,YAN RuiRui. Effects of Grazing Disturbance on the Stoichiometry of Nitrogen and Phosphorus in Plant Organs of Leymus chinensis Meadow Steppe [J]. Scientia Agricultura Sinica, 2022, 55(7): 1371-1384.
[4] LI ShiJia,LÜ ZiJing,ZHAO Jin. Identification of R2R3-MYB Subfamily in Chinese Jujube and Their Expression Pattern During the Fruit Development [J]. Scientia Agricultura Sinica, 2022, 55(6): 1199-1212.
[5] GUO Yan, ZHANG ShuHang, LI Ying, ZHANG XinFang, WANG GuangPeng. Diversity Analysis of 36 Leaf Phenotypic Traits of Chinese Chestnut [J]. Scientia Agricultura Sinica, 2022, 55(5): 991-1009.
[6] JIA GuanQing, DIAO XianMin. Current Status and Perspectives of Innovation Studies Related to Foxtail Millet Seed Industry in China [J]. Scientia Agricultura Sinica, 2022, 55(4): 653-665.
[7] SHI Xi, NING LiHua, GE Min, WU Qi, ZHAO Han. Screening and Application of Biomarkers Related to Maize Nitrogen Status [J]. Scientia Agricultura Sinica, 2022, 55(3): 438-450.
[8] YOU YuWan,ZHANG Yu,SUN JiaYi,ZHANG Wei. Genome-Wide Identification of NAC Family and Screening of Its Members Related to Prickle Development in Rosa chinensis Old Blush [J]. Scientia Agricultura Sinica, 2022, 55(24): 4895-4911.
[9] HU XueHua,LIU NingNing,TAO HuiMin,PENG KeJia,XIA Xiaojian,HU WenHai. Effects of Chilling on Chlorophyll Fluorescence Imaging Characteristics of Leaves with Different Leaf Ages in Tomato Seedlings [J]. Scientia Agricultura Sinica, 2022, 55(24): 4969-4980.
[10] ZHANG HongCheng,HU YaJie,DAI QiGen,XING ZhiPeng,WEI HaiYan,SUN ChengMing,GAO Hui,HU Qun. Discussions on Frontiers and Directions of Scientific and Technological Innovation in China’s Field Crop Cultivation [J]. Scientia Agricultura Sinica, 2022, 55(22): 4373-4382.
[11] ZHANG Qi,DUAN Yu,SU Yue,JIANG QiQi,WANG ChunQing,BIN Yu,SONG Zhen. Construction and Application of Expression Vector Based on Citrus Leaf Blotch Virus [J]. Scientia Agricultura Sinica, 2022, 55(22): 4398-4407.
[12] DU JinXia,LI YiSha,LI MeiLin,CHEN WenHan,ZHANG MuQing. Evaluation of Resistance to Leaf Scald Disease in Different Sugarcane Genotypes [J]. Scientia Agricultura Sinica, 2022, 55(21): 4118-4130.
[13] MI GuoHua,HUO YueWen,ZENG AiJun,LI GangHua,WANG Xiu,ZHANG FuSuo. Integration of Agricultural Machinery and Agronomic Techniques for Crop Nutrient Management in China [J]. Scientia Agricultura Sinica, 2022, 55(21): 4211-4224.
[14] YOU JiaLing,LI YouMei,SUN MengHao,XIE ZhaoSen. Analysis Reveals the Differential Expression of Genes Related to Starch Accumulation in Chloroplast of Leaf with Different Ages in Pinot Noir Grape [J]. Scientia Agricultura Sinica, 2022, 55(21): 4265-4278.
[15] MA YuFeng,ZHOU ZhongXiong,LI YuTong,GAO XueQin,QIAO YaLi,ZHANG WenBin,XIE JianMing,HU LinLi,YU JiHua. Effects of Nitrogen Level and Form on Root Morphology of Mini Chinese Cabbage and Its Physiological Index [J]. Scientia Agricultura Sinica, 2022, 55(2): 378-389.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!