Scientia Agricultura Sinica ›› 2012, Vol. 45 ›› Issue (19): 3909-3920.doi: 10.3864/j.issn.0578-1752.2012.19.002

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Identification of QTLs for Major Isoflavone Components mong Multiple Environments in Soybean Seeds

 ZHANG  Jing-Ying, GE  Yi-Nan, SUN  Jun-Ming, HAN  Fen-Xia, YU  Fu-Kuan, YAN  Shu-Rong, YANG  Hua   

  1. 1.中国农业科学院作物科学研究所/农业部北京大豆生物学重点实验室 北京 100081
  • Received:2012-06-11 Online:2012-10-01 Published:2012-07-31

Abstract: 【Objective】The QTLs for major isoflavone components were identified among multiple environments by different QTL mapping methods in soybean seeds, in order to provide a theoretical basis for soybean isoflavone marker-assisted selection. 【Method】 In this study, a recombinant inbreed line population (RIL, F5∶7-8) was developed by using the cross between the isoflavone contrasting cv. LHD2 with high-isoflavone concentration (3 697.24 μg•g-1) and cv. NHZ with low-isoflavone concentration (1 816.67 μg•g-1). The polymorphism of SSR markers among the RIL population was analyzed and the major isoflavone components were determined by HPLC. 【Result】The results showed that a soybean linkage map with a total distance of 3 546.54 cM was constructed using 161 polymorphism SSR molecular markers in the RIL population. A total of 14 QTLs associated with the major isoflavone components were found by ICIM, IM, and SMA methods in the ICIMapping 3.2 software under the four environments. 【Conclusion】The three QTLs flanked by the marker interval Sat_003-Satt306, Satt070-Satt122 and Satt571-Satt270 were detected among multiple environments in more than two methods.

Key words: soybean (Glycine max L. Merrill), isoflavone component, SSR, QTL

[1]Weidenborner M, Hindorf H, Jha H C, Tsotsonos P, Egge H. Antifungal activity of isoflavonoids in different reduced stages on Rhizoctonia solani and Sclerotium rolfsii. Phytochemistry, 1990, 29: 801-803.

[2]Messins M, Barnes S. The role of soy products in reducing risk of cancer. Journal of the National Cancer Institute, 1991, 83: 541-546.

[3]Coward L, Barnes N C, Setchell K D R. Genistein, daidzein, and their-glycoside conjugates: Antitumor isoflavones in soybean foods from American and Asian diets. Journal of Agricultural and Food Chemistry, 1993, 41: 1961-1967.

[4]Munro I C, Harwood M, Hlywka J J, Stephen A M, Doull J, Flamm W G, Adlercreutz H. Soy isoflavones: A safety review. Nutrition Reviews, 2003, 61(1): 1-33.

[5]Howes L G, Howes J B, Knight D C. Isoflavone therapy for menopausal flushes: A systematic review and meta-analysis. Maturitas, 2006, 55(3): 203-211.

[6]Ma D F, Qin L Q, Wang P Y, Katoh R. Soy isoflavone intake increases bone mineral density in the spine of menopausal women: Meta- analysis of randomized controlled trials. Clinical Nutrition, 2008, 27(1): 57-64.

[7]Nagata C. Factors to consider in the association between soy isoflavone intake and breat cancer risk. Journal of Epidemiology, 2010, 20(2): 83-89.

[8]Kudou S, Fleury Y, Welti D, Magnolato D, Uchida T, Kitamura K, Okubo K. Malonyl isoflavone glycosides in soybean seeds (Glycine max L. Merrill). Agricultural and Biological Chemistry, 1991, 55(9): 2227-2233.

[9]孙君明, 韩粉霞, 丁安林. 高效液相色谱(HPLC)技术鉴定中国南方大豆品种异黄酮主要组分. 植物遗传资源学报, 2004, 5(3): 222-226. 

Sun J M, Han F X, Ding A L. Determination of major isoflavone components based on HPLC technology in southern soybean varieties in China. Journal of Plant Genetic Resources, 2004, 5(3): 222-226. (in Chinese)

[10]Wang H J, Murphy P A. Isoflavone composition of American     and Japanese soybeans in Iowa: Effects of variety, crop year and location. Journal of Agricultural and Food Chemistry, 1994, 42: 1674-1677.

[11]林  红, 来永才, 齐  宁, 李  辉, 张晓波, 杨雪峰. 黑龙江省野生大豆、栽培大豆高异黄酮种质资源筛选. 植物遗传资源学报, 2005, 6(1): 53-55.

Lin H, Lai Y C, Qi N, Li H, Zhang X B, Yang X F. Screening of germplasm with high content of isoflavones in wild and cultivated soybean in Heilongjiang. Journal of Plant Genetic Resources, 2005, 6(1): 53-55. (in Chinese)

[12]Ryder T B, Hedrick S A, Bell J N. Elicitor rapidly induces chalcone synthase mRNA in Phaseolus vulgaris cells at the onset of the phytoalexin defense response. Molecular and General Genetics, 1987, 210: 219-233.

[13]沈黎明, 孙君明, 丁安林. 不同光照条件下大豆体内异黄酮的含量与分布. 中国油料作物学报, 1999, 21(2): 36-40.

Shen L M, Sun J M, Ding A L. Contents and distribution of isoflavones in soybean under different light conditions. Chinese Journal of Oil Crop Sciences, 1999, 21(2): 36-40. (in Chinese)

[14]Bennett J O, Yu O, Heatherly L G, Krishnan H B. Accumulation of genistein and daidzein, soybean isoflavones implicated in promoting human health, is significantly elevated by irrigation. Journal of Agricultural and Food Chemistry, 2004, 52: 7574-7579.

[15]孙君明, 丁安林. 大豆籽粒中异黄酮含量的质量-数量性状的遗传分析初探. 大豆科学, 1998, 17: 305-310.

Sun J M, Ding A L. Qualitative-quantitative analysis for inheritance of isoflavone content in soybean seeds. Soybean Science, 1998, 17: 305-310. (in Chinese)

[16]Sun J M, Ding A L, Chang R Z. Genetic analysis on isoflavone content in soybean seeds. Agricultural Sciences in China, 2002, 1(3): 274-279.

[17]Chiari L, Naoe L K, Piovesan N D, JoséI C, Cruz C D, Moreira M A, Barros E G. Genetic parameters relating isoflavone and protein content in soybean seeds. Euphytica, 2004, 138: 55-60.

[18]梁慧珍, 李卫东, 方宣钧, 曹颖妮, 王  辉. 大豆异黄酮及其组分含量的配合力和杂种优势. 中国农业科学, 2005, 38(10): 2147-2152.

Liang H Z, Li W D, Fang X J, Cao Y N, Wang H. Genetic analysis of combining abilities and heterosis in contents of soybean isoflavone and its components among the soybean varieties [Glycine max (L.) Merr.]. Scientia Agricultura Sinica, 2005, 38(10): 2147-2152. (in Chinese)

[19]宁海龙, 李文霞, 李文滨, 卢双勇. 大豆籽粒异黄酮含量的遗传效应分析. 中国油料作物学报, 2006, 28(3): 272-275.

Ning H L, Li W X, Li W B, Lu S Y. Genetic analysis of isoflavone content in soybean [Glycine max (L.) Merr.]. Chinese Journal of Oil Crop Sciences, 2006, 28(3): 272-275. (in Chinese)

[20]Meksem K, Njiti V N, Banz W J, Iqbal M J, Kassem M M, Hyten D L, Yuang J, Winters T A, Lightfoot D A. Genomic regions that underlie soybean seed isoflavone content. Journal of Biomedicine and Biotechnology, 2001, 1: 38-44.

[21]Kassem M A, Meksem K, Iqbal M J, Njiti V N, Banz W J, Winters T A, Wood A, Lightfoot D A. Definition of soybean genomic regions that control seed phytoestrogen amounts. Journal of Biomedicine and Biotechnology, 2004, 1: 52-60.

[22]Kassem M A, Shultz J, Meksem K, Cho Y, Wood A J, Iqbal M J, Lightfoot D A. An updated ‘Essex’ by ‘Forrest’ linkage map and first composite interval map of QTL underlying six soybean traits. Theoretical and Applied Genetics, 2006, 113: 1015-1026.

[23]Primomo V S, Poysa V, Ablett G R, Jackson C J, Gijzen M, Rajcan I. Mapping QTL for individual and total isoflavone content in soybean seeds. Crop Science, 2005, 45(6): 2545-2464.

[24]Gutierrez-Gonzale J J, Wu X L, Zhang J, Lee J D, Ellersieck M, Shannon J G, Yu O, Nguyen T H, Sleper A D. Genetic control of soybean seed isoflavone content: Importance of statistical model and epistasis in complex traits. Theoretical and Applied Genetics, 2009, 119: 1069-1083.

[25]Gutierrez-Gonzale J J, Vuong D T, Zhong R, Yu O, Lee J, Shannon G, Ellersieck M, Nguyen T H, Sleper A D. Major locus and other novel additive and epistatic loci involved in modulation of isoflavone concentration in soybean seeds. Theoretical and Applied Genetics, 2011, 123: 1375-1385.

[26]Yang K, Moon J K, Jeong N, Chun H K, Kang S T, Back K, Jeong S C. Novel major quantitative trait loci regulating the content of isoflavone in soybean seeds. Genes and Genomics, 2011, 33: 685-692.

[27]王春娥. 我国大豆资源豆腐豆乳得率和异黄酮含量的遗传变异及两类性状的QTL分析[D]. 南京: 南京农业大学, 2008.

Wang C E. Genetic variability of toftu and soymilk output and isoflavone content in soybean germplasm from China and QTL mapping of the two kinds of traits[D]. Nanjing: Nanjing Agricultural University, 2008. (in Chinese)

[28]梁慧珍, 王树峰, 余永亮, 练  云, 王庭峰, 位艳丽, 巩鹏涛, 刘学义, 方宣钧. 大豆异黄酮与脂肪、蛋白质含量基因定位分析. 中国农业科学, 2009, 42(8) :2652-2660.

Liang H Z, Wang S F, Yu Y L, Lian Y, Wang T F, Wei Y L, Gong P T, Liu X Y, Fang X J. QTL Mapping of isoflavone, oil and protein content in soybean. Scientia Agricultura Sinica, 2009, 42(8): 2652-2660. (in Chinese)

[29]Zeng G, Li D, Han Y, Teng W, Wang J, Qiu L, Li W. Identification of QTL underlying isoflavone contents in soybean seeds among multiple environments. Theoretical and Applied Genetics, 2009, 118: 1455-1463.

[30]葛一楠. 大豆异黄酮主要组分的种质鉴定与QTLs标记定位[D]. 北京: 中国农业科学院, 2010.

Ge Y N. Mapping QTLs and screening germplasm for the major isoflavone components in soybean seeds[D]. Beijing: Chinese Academy of Agricultural Sciences, 2010. (in Chinese)

[31]王  英. 大豆生育期结构性状的遗传分析及相关基因的分子标记[D]. 北京: 中国农业科学院, 2008.

Wang Y. Genetic analysis for growth period structure traits and QTL mapping of relative genes in soybean[D]. Beijing: Chinese Academy of Agricultural Sciences, 2008. (in Chinese)

[32]Sun J M, Sun B L, Han F X, Yan S R, Yang H, Akio K. Rapid HPLC method for determination of 12 isoflavone components in soybean seeds. Agricultural Sciences in China, 2011, 10(1): 70-77.

[33]盖钧镒, 章元明, 王建康. QTL混合遗传模型扩展至2对主基因+多基因时的多世代联合分析. 作物学报, 2000, 26(4): 385-391.

Gai J Y, Zhang Y M, Wang J K. A joint analysis of multiple generations for QTL models extended to mixed two major genes plus polygene. Acta Agronomica Sinica, 2000, 26(4): 385-391. (in Chinese)

[34]翟虎渠, 王建康. 应用数量遗传: 第二版. 北京: 中国农业科学技术出版社, 2007.

Zhai H Q, Wang J K. Applied Quantitative Genetics: The second edition. Beijing: China Agricultural Science and Technology Press, 2007. (in Chinese)

[35]王建康. 数量性状基因的完备区间作图方法. 作物学报, 2009, 35(2): 239-245.

Wang J K. Inclusive composite interval mapping of quantitative trait genes. Acta Agronomica Sinica, 2009, 35(2): 239-245. (in Chinese)

[36]李慧慧, 张鲁燕, 王建康. 数量性状基因定位研究中若干常见问题的分析与解答. 作物学报, 2010, 36(6): 918-931.

Li H H, Zhang L Y, Wang J K. Analysis and answers to frequently asked questions in quantitative trait locus mapping. Acta Agronomica Sinica, 2010, 36(6): 918-931. (in Chinese)

[37]Orf J H, Chase K, Jarvik T, Mansur L M, Cregan P B, Adler F R, Lark K G. Genetics of soybean agronomic traits: I. Comparison of three related recombinant inbred populations. Crop Science, 1999, 39(6): 1642-1651.

[38]Reinprecht Y, Poysa V W, Yu K F, Rajcan I, Ablett G R, Pauls K P. Seed and agronomic QTL in low linolenic acid, lipoxygenase-free soybean (Glycine max (L.) Merrill) germplasm. Genome, 2006, 49(12): 1510-1527.

[39]Hoeck J A, Fehr W R, Shoemarer R C, Welke G A, Johnson S L. Molecular marker analysis of seed size in soybean. Crop Science, 2003, 43(1): 68-74.  

[40]Qi Z M, Wu Q, Han X, Sun Y N, Du X Y, Liu C Y, Jiang H W, Hu G H, Chen Q S. Soybean oil content QTL mapping and integrating with meta-analysis method for mining genes. Euphytica, 2011, 179: 499-514.

[41]Rieseberg L H, Sinervo B, Linder C R. Role of gene interactions in hybrid speciation: Evidence from ancient and experimental hybrids. Science, 1996, 272: 741-745.

[42]Gutierrez-Gonzale J J, Wu X L, Gillman D J, Lee J D, Zhong R, Yu O, Shannon J G, Ellersieck M, Nguyen T H, Sleper A D. Intricate environment-modulated genetic networks control isoflavone accumulation in soybean seeds. BMC Plant Biology, 2010, 10: 105.
[1] PENG TingShen, LU JiuYan, WU MeiLin, YAN YuXin, LIU HongZhou, NAN WenBin, QIN XiaoJian, LI Ming, GONG JunYi, LIANG YongShu. QTL Analysis of Yield-Related Traits in Both Huangnuo2# and Changbai7# of Perennial Chinese Rice [J]. Scientia Agricultura Sinica, 2026, 59(7): 1361-1379.
[2] YE MeiJin, CHEN JiaTing, ZHOU JieGuang, YIN Li, HU XinRong, LAN YuXin, CHEN Bin, SU LongXing, LIU JiaJun, LIU TianChao, LI XiaoYu, MA Jian. Identification, Validation and Genetic Effect Analysis of Major QTL for Spike Density in Wheat [J]. Scientia Agricultura Sinica, 2026, 59(1): 17-28.
[3] CHEN BingRu, TANG YuJie, ZHANG LiXia, ZHOU YuFei, YU Miao, SHI GuiShan, WANG XinDing, LI Yang, GAO ShiJie, LU XiaoChun, WANG Nai, DIAO XianMin. The Green Revolution of Chinese Grain Hybrid Sorghum [J]. Scientia Agricultura Sinica, 2025, 58(8): 1494-1507.
[4] YANG YongQing, HU PengJu, SONG YaHui, JIN XinXin, SU Qiao, WANG Jin. QTL Mapping of Quality Traits for A Peanut Germplasm SW9721-3 with Ultra-High Oil Content [J]. Scientia Agricultura Sinica, 2025, 58(4): 635-646.
[5] LI Lu, XIE Zhuang, XIE KeYing, ZHANG Han, ZHAO ZhuoWen, XIANG AoNi, LI QiaoLong, LING YingHua, HE GuangHua, ZHAO FangMing. Construction of Single and Dual-Segment Substitution Lines from Rice CSSL-Z492 and Genetic Dissection of QTL for Grain Size [J]. Scientia Agricultura Sinica, 2025, 58(3): 401-415.
[6] WANG LiYuan, WANG Hui, WANG MuMu, WANG DongJian, LI RuYu, ZHENG YongSheng, ZHANG Han. Construction and Application of DNA Fingerprint Database for Known Varieties in Upland Cotton DUS Testing [J]. Scientia Agricultura Sinica, 2025, 58(22): 4570-4588.
[7] ZHAO DongLan, MA JuKui, XIAO ShiZhuo, ZHOU ZhiLin, ZHAO LingXiao, WANG Jie, DAI XiBin, SUN HouJun, CAO QingHe. QTL Analysis for Resistance to Stem Nematode Disease in Sweetpotato [J]. Scientia Agricultura Sinica, 2025, 58(17): 3389-3399.
[8] ZHENG MinHua, CHEN Luo, XING JiaLe, XIE YueLan, JIANG XianYa, NIE Shuai, CAI FuGe, WU HaoXiang, LU ZhanHua, SUN Wei, HUO Xing, BAI Song, ZHAO JunLiang, YANG Wu. Genome-Wide Association Study and Genetic Improvement Study of Rice Blast Resistance [J]. Scientia Agricultura Sinica, 2025, 58(14): 2707-2719.
[9] WU YuZhen, HUANG LongYu, ZHOU DaYun, HUANG YiWen, FU ShouYang, PENG Jun, KUANG Meng. Construction of SSR Fingerprint Library and Comprehensive Evaluation for Approved Cotton Varieties in China [J]. Scientia Agricultura Sinica, 2024, 57(8): 1430-1443.
[10] ZHAO ZhenJian, WANG Kai, CHEN Dong, SHEN Qi, YU Yang, CUI ShengDi, WANG JunGe, CHEN ZiYang, YU ShiXin, CHEN JiaMiao, WANG XiangFeng, TANG GuoQing. Integrated Aanalysis of Genome and DNA Methylation for Screening Key Genes Related to Pork Quality Traits [J]. Scientia Agricultura Sinica, 2024, 57(7): 1394-1406.
[11] XIONG ShangYe, ZHANG Xiang, LIANG BaoHui, YE YangDong, LI YuYang, ZHU Xiao, ZHU ZhiHong, GUAN HuaZhong, ZHANG Shuai, WU JianGuo, HU Jie. Fine Mapping and Analysis of Pyramiding Effects of Rice Brown Planthopper Resistance Genes QBPH1 and QBPH4 [J]. Scientia Agricultura Sinica, 2024, 57(23): 4619-4631.
[12] HAN XuDong, YANG ChuanQi, ZHANG Qing, LI YaWei, YANG XiaXia, HE JiaTian, XUE JiQuan, ZHANG XingHua, XU ShuTu, LIU JianChao. QTL Mapping and Candidate Gene Screening for Nitrogen Use Efficiency in Maize [J]. Scientia Agricultura Sinica, 2024, 57(21): 4175-4191.
[13] ZHANG MingQi, WANG Rui, ZHANG ChunXiao, SUN Bo, REN Jie, LI ShuFang, WANG Lu, ZHU ShaoXi, ZHANG JiangBin, SHI XinChen, WANG HaiJie, ZHANG YunLong, TIAN HongLi, ZHAO YiKun, KUANG Meng, WANG YuanDong, YI HongMei, LI XiaoHui, WANG FengGe. The Construction and Application of SSR and SNP Molecular ID for Maize Germplasm Resources of Jilin Province [J]. Scientia Agricultura Sinica, 2024, 57(2): 236-249.
[14] LIU DeLong, LI ShiRu, WANG ChuanXing, GUO ShuQing, MA ZhiXiu, WU YongJiang, HAN HuiBing, LI YuJie, ZHANG PanPan, YANG Pu. Phenotypical Variation and Dynamic QTL Mapping of Plant Height in Foxtail Millet at Different Developmental Stages [J]. Scientia Agricultura Sinica, 2024, 57(18): 3533-3550.
[15] ZHAI CaiJiao, GE LiJiao, CHENG YuJing, QIU Liang, WANG XiaoQiu, LIU ShuiDong. Genetic Diversity Analysis of Wax Gourd and Chieh-Qua Germplasm Resources Based on Phenotypic Traits and SSR Markers [J]. Scientia Agricultura Sinica, 2024, 57(17): 3440-3457.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!