Scientia Agricultura Sinica ›› 2020, Vol. 53 ›› Issue (23): 4738-4749.doi: 10.3864/j.issn.0578-1752.2020.23.002
• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles Next Articles
HAO YanRong1(
),DU Wei1,HOU SiYu1,WANG DongHang1,FENG HongMei1,HAN YuanHuai1,ZHOU MeiLiang2,ZHANG KaiXuan2,LIU LongLong3,WANG JunZhen4,LI HongYing1,SUN ZhaoXia1(
)
| [1] |
TSUJI K, OHNISHI O . Origin of cultivated tatary buckwheat (Fagopyrum tataricum Gaertn.) revealed by RAPD analyses. Genetic Resources and Crop Evolution, 2000,47(4):431-438.
doi: 10.1023/A:1008741513277 |
| [2] |
JOSHI D C, CHAUDHARI G V, SOOD S, KANT L, PATTANAYAK A, ZHANG K X, FAN Y, JANOVSKA D, MEGLIC V, ZHOU M L . Revisiting the versatile buckwheat: reinvigorating genetic gains through integrated breeding and genomics approach. Planta, 2019,250:783-801.
doi: 10.1007/s00425-018-03080-4 pmid: 30623242 |
| [3] |
JOSHI D C, ZHANG K X, WANG C L, CHANDORA R, KHURSHID M, LI J B, HE M, GEORGIEV M I, ZHOU M L . Strategic enhancement of genetic gain for nutraceutical development in buckwheat: A genomics-driven perspective. Biotechnology Advances, 2018, https://doi.org/10.1016/j.biotechadv.2019.107479.
doi: 10.1016/j.biotechadv.2020.107650 pmid: 33091484 |
| [4] | HAGIWARA M, IZUSAWA H, INOUE N . Varietal difference of shoot growth characters related to lodging in tartary buckwheat. Fagopyrum, 1999,16:67-72. |
| [5] | 郭志利, 孙常青 . 北方旱地荞麦抗倒栽培技术研究. 园艺与种苗, 2007,27(5):364-366. |
| GUO Z L, SUN C Q . Study on the cultivation technology of buckwheat in the north dry land. Horticulture & Seed, 2007,27(5):364-366. (in Chinese) | |
| [6] | 虞慧芳, 曹家树, 王永勤 . 植物矮化突变体的激素调控. 生命科学, 2002,14(2):85-88. |
| YU H F, CAO J S, WANG Y Q . Hormones regulation in plant dwarfing mutants. Chinese Bulletin of Life Sciences, 2002,14(2):85-88. (in Chinese) | |
| [7] |
FORD B A, FOO E, SHARWOOD R, KARAFIATOVA M, VRANA J, MACMILLAN C, NICHOLS D S, STEUERNAGEL B, UAUY C, DOLEZEL J, CHANDLER P M, SPIELMEYER W . Rht18 semi-dwarfism in wheat is due to increased GA 2-oxidaseA9 expression and reduced GA content. Plant Physiology, 2018,177(1):168-180.
doi: 10.1104/pp.18.00023 pmid: 29545269 |
| [8] |
BERNARDO-GARCIA S, DE LUCAS M, MARTINEZ C, ESPINOSA-RUIZ A, DAVIERE J M, PRAT S . BR-dependent phosphorylation modulates PIF4 transcriptional activity and shapes diurnal hypocotyl growth. Genes Development, 2014,28(15):1681-1694.
doi: 10.1101/gad.243675.114 pmid: 25085420 |
| [9] |
HU Z Y, YAN H F, YANG J H, SHINJIRO Y, MASAHIKO M, ITSURO T, NOBUHIRO T, JUNKO K, MIKIO N . Strigolactones negatively regulate mesocotyl elongation in rice during germination and growth in darkness. Plant and Cell Physiology, 2010,51(7):1136-1142.
doi: 10.1093/pcp/pcq075 pmid: 20498118 |
| [10] | 王冰, 李家洋, 王永红 . 生长素调控植物株型形成的研究进展. 植物学通报, 2006,23(5):443-458. |
| WANG B, LI J Y, WANG Y H . Advances in understanding the roles of auxin involved in modulating plant architecture. Chinese Bulletin of Botany, 2006,23(5):443-458. (in Chinese) | |
| [11] |
WANG Q, QIN G C, CAO M, CHEN R, HE Y M, YANG L Y, ZENG Z J, YU Y Q, GU Y T, XING W M, TAO W A, XU T D . A phosphorylation-based switch controls TAA1-mediated auxin biosynthesis in plants. Nature Communications, 2020,11:679.
doi: 10.1038/s41467-020-14395-w pmid: 32015349 |
| [12] |
ROOSJEN M, PAQUE S, WEIJERS D . Auxin response factors: Output control in auxin biology. Journal of Experimental Botany, 2018,69(2):179-188.
doi: 10.1093/jxb/erx237 pmid: 28992135 |
| [13] |
GUILFOYLE T J, HAGEN G . Auxin response factors. Current Opinion in Plant Biology, 2007,10(5):453-460.
doi: 10.1016/j.pbi.2007.08.014 |
| [14] |
OKUSHIMA Y, OVERVOORDE P J, ARIMA K, ALONSO J M, CHAN A, CHANG C, ECKER J R, HUGHES B, LUI A, NGUYEN D, ONODERA C, QUACH H, SMITH A, YU G X, THEOLOGIS A . Functional genomic analysis of the auxin response factor gene family members in Arabidopsis thaliana: Unique and overlapping functions of ARF7 and ARF19. The Plant Cell, 2005,17(2):444-463.
doi: 10.1105/tpc.104.028316 pmid: 15659631 |
| [15] |
WANG D, PEI K, FU Y, SUN Z, LI S, LIU H, TANG K, HAN B, TAO Y . Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa). Gene, 2007,394(1):13-24.
doi: 10.1016/j.gene.2007.01.006 |
| [16] |
KALLURI U C, DIFAZIO S P, BRUNNER A M, TUSKAN G A . Genome-wide analysis of Aux/IAA and ARF gene families in Populus trichocarpa. BMC Plant Biology, 2007,7(1):59.
doi: 10.1186/1471-2229-7-59 |
| [17] |
XING H, PUDAKE R N, GUO G, XING G, HU Z, ZHANG Y, SUN Q, NI Z . Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize. BMC Genomics, 2011,12(1):178.
doi: 10.1186/1471-2164-12-178 |
| [18] |
WU J, WANG F, CHENG L, KONG F, PENG Z, LIU S, YU X, LU G . Identification, isolation and expression analysis of auxin response factor (ARF) genes in Solanum lycopersicum. Plant Cell Reports, 2011,30(11):2059-2073.
doi: 10.1007/s00299-011-1113-z |
| [19] |
VAN HA C, LE D T, NISHIYAMA R, WATANABE Y, SULIEMAN S, TRAN U T, MOCHIDA K, DONG N V, YAMAGUCHI-SHINOZAKI K, SHINOZAKI K, PHAN TRAN L S . The auxin response factor transcription factor family in soybean: genome-wide identification and expression analyses during development and water stress. DNA Research, 2013,20(5):511-524.
doi: 10.1093/dnares/dst027 |
| [20] |
WAN S, LI W, ZHU Y, LIU Z, HUANG W, ZHAN J . Genome-wide identification, characterization and expression analysis of the auxin response factor gene family in Vitis vinifera. Plant Cell Reports, 2014,33:1365-1375.
doi: 10.1007/s00299-014-1622-7 |
| [21] |
WU B, LI Y H, WU J Y, CHEN Q Z, HUANG X, CHEN Y F, HUANG X L . Over-expression of mango (Mangifera indica L.) MiARF2 inhibits root and hypocotyl growth of Arabidopsis. Molecular Biology Reports, 2011,38(5):3189-3194.
doi: 10.1007/s11033-010-9990-8 |
| [22] |
JUNG J H, LEE M, PARK C M . A transcriptional feedback loop modulating signaling crosstalks between auxin and brassinosteroid in Arabidopsis. Molecules and Cells, 2010,29(5):449-456.
doi: 10.1007/s10059-010-0055-6 |
| [23] |
HUANG J, LI Z, ZHAO D . Deregulation of the OsmiR160 target gene OsARF18 causes growth and developmental defects with an alteration of auxin signaling in rice. Scientific Reports, 2016,6(1):29938.
doi: 10.1038/srep29938 |
| [24] |
ZHANG L J, LI X X, MA B, GAO Q, DU H L, HAN Y H, LI Y, CAO Y H, QI M, ZHU Y X, LU H W, MA M C, LIU L L, ZHOU J P, NAN C H, QIN Y J, WANG J, CUI L, LIU H M, LIANG C Z, QIAO Z J . The tartary buckwheat genome provides insights into rutin biosynthesis and abiotic stress tolerance. Molecular Plant, 2017,10:1224-1237.
doi: 10.1016/j.molp.2017.08.013 pmid: 28866080 |
| [25] |
LIU M Y, MA Z T, WANG A H, ZHENG T R, HUANG L, SUN W J, ZHANG Y J, JIN W Q, ZHAN J Y, CAI Y T, TANG Y J, WU Q, TANG Z Z, BU T L, LI C L, CHEN H . Genome-wide investigation of the auxin response factor gene family in tartary buckwheat (Fagopyrum tataricum). International Journal of Molecular Sciences, 2018,19(11):3526.
doi: 10.3390/ijms19113526 |
| [26] | 王茜茹, 惠志明, 徐建飞, 段绍光, 卞春松, 金黎平, 李广存 . 马铃薯薯形发育的组织细胞学研究. 中国蔬菜, 2020(4):67-73. |
| WANG Q R, HUI Z M, XU J F, DUAN S G, BIAN C S, JIN L P, LI G C . Studies on histocytology of potato tuber shape development. China Vegetables, 2020(4):67-73. (in Chinese) | |
| [27] | 李艳林, 高志红, 宋娟, 王万许, 侍婷 . 植物生长素响应因子ARF与生长发育. 植物生理学报, 2017,53(10):1842-1858. |
| LI Y L, GAO Z H, SONG J, WANG W X, SHI T . Auxin response factor (ARF) and its functions in plant growth and development. Plant Physiology Journal, 2017,53(10):1842-1858. (in Chinese) | |
| [28] |
LAU S, JURGENS G, DE SMET I . The evolving complexity of the auxin pathway. The Plant Cell, 2008,20(7):1738-1746.
doi: 10.1105/tpc.108.060418 pmid: 18647826 |
| [29] |
欧春青, 姜淑苓, 王斐, 赵亚楠 . 梨全基因组生长素反应因子(ARF)基因家族鉴定及表达分析. 中国农业科学, 2018,51(2):327-340.
doi: 10.3864/j.issn.0578-1752.2018.02.012 |
|
OU C Q, JIANG S L, WANG F, ZHAO Y N . Genome-wide identification and expression analysis of auxin response factor (ARF) gene family in pear. Scientia Agricultura Sinica, 2018,51(2):327-340. (in Chinese)
doi: 10.3864/j.issn.0578-1752.2018.02.012 |
|
| [30] | 李慧峰, 冉昆, 何平, 王海波, 常源升, 孙清荣, 程来亮, 李林光 . 苹果生长素响应因子(ARF)基因家族全基因组鉴定及表达分析. 植物生理学报, 2015,51(7):1045-1054. |
| LI H F, RAN K, HE P, WANG H B, CHANG Y S, SUN Q R, CHENG L L, LI L G . Genome-wide identification and expression analysis of auxin response factor (ARF) gene family in apple. Plant Physiology Journal, 2015,51(7):1045-1054. (in Chinese) | |
| [31] | ELLIS C M, NAGPAL P, YOUNG J C, HAGEN G, GUILFOYLE T J, REED J W . Auxin response factor 1 and Auxin response factor 2 regulate senescence and floral organ abscission in Arabidopsis thaliana. Development, 2005,132(20):4563-4574. |
| [32] | FENG Z H, ZHU J, DU X L, CUI X H . Effects of three auxin-inducible LBD members on lateral root formation in Arabidopsis thaliana. Planta, 2012,236(4):1227-1237. |
| [33] |
HARDTKE C S, CKURSHUMOVA W, VIDAURRE D P, SINGH S A, STAMATIOU G, TIWARI S B, HAGEN G, GUILFOYLE T J, BERLETH T . Overlapping and non-redundant functions of the Arabidopsis auxin response factors monopteros and nonphototropic hypocotyl 4. Development, 2004,131(5):1089-1100.
doi: 10.1242/dev.00925 pmid: 14973283 |
| [34] |
WU M F, TIAN Q, REED J W . Arabidopsis microRNA167 controls patterns of ARF6 and ARF8 expression, and regulates both female and male reproduction. Development, 2006,133(21):4211-4218.
doi: 10.1242/dev.02602 pmid: 17021043 |
| [35] |
ODAT O, GARDINER J, SAWCHUK M G, VERNA C, DONNER T J, SCARPELLA E . Characterization of an allelic series in the monopteros gene of Arabidopsis. Genesis, 2014,52(2):127-133.
doi: 10.1002/dvg.22729 |
| [36] |
TIAN C E, MUTO H, HIGUCHI K, MATAMURA T, TATEMATSU K, KOSHIBA T, YAMAMOTO K T . Disruption and over expression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition. The Plant Journal, 2004,40(3):333-343.
doi: 10.1111/j.1365-313X.2004.02220.x pmid: 15469491 |
| [37] |
TIWARI S B, HAGEN G, GUILFOYLE T . The role of auxin response factor domains in auxin-reponsive transcription. The Plant Cell, 2003,15:533-543.
doi: 10.1105/tpc.008417 pmid: 12566590 |
| [38] |
WOODWARD A W, BARTEL B . A receptor for auxin. The Plant Cell, 2005,17(9):2425-2429.
doi: 10.1105/tpc.105.036236 pmid: 16141189 |
| [39] |
GUILFOYLE T . Sticking with auxin. Nature, 2007,446(7136):621-622.
doi: 10.1038/446621a pmid: 17410164 |
| [40] |
CHENG Y . Auxin biosynthesis by the YUCCA flavin monooxygenases controls the formation of floral organs and vascular tissues in Arabidopsis. Genes & Development, 2006,20(13):1790-1799.
doi: 10.1101/gad.1415106 pmid: 16818609 |
| [41] |
LI J S, DAI X H, ZHAO Y D . A role for auxin response factor 19 in auxin and ethylene signaling in Arabidopsis. Plant Physiology, 2006,140:899-908.
doi: 10.1104/pp.105.070987 pmid: 16461383 |
| [42] |
王红飞, 尚庆茂 . 被子植物下胚轴细胞伸长的分子机理. 植物学报, 2018,53(2):276-287.
doi: 10.11983/CBB17065 |
|
WANG H F, SHANG Q M . Molecular mechanisms of cell elongation in angiosperm hypocotyl. Chinese Bulletin of Botany, 2018,53(2):276-287. (in Chinese)
doi: 10.11983/CBB17065 |
|
| [43] |
盛慧, 秦智伟, 李文滨, 周秀艳, 武涛, 辛明 . 黄瓜生长素反应因子(ARF)家族鉴定及表达特异性分析. 中国农业科学, 2014,47(10):1985-1994.
doi: 10.3864/j.issn.0578-1752.2014.10.012 |
|
SHENG H, QIN Z W, LI W B, ZHOU X Y, WU T, XIN M . Genome-wide identification and expression analysis of auxin response factor (ARF) family in Cucumber. Scientia Agricultura Sinica, 2014,47(10):1985-1994. (in Chinese)
doi: 10.3864/j.issn.0578-1752.2014.10.012 |
|
| [44] |
WALLER F, FURUYA M, NICK P . OsARF1, an auxin response factor from rice, is auxin-regulated and classifies as a primary auxin responsive gene. Plant Molecular Biology, 2002,50(3):415-425.
doi: 10.1023/A:1019818110761 |
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