Scientia Agricultura Sinica ›› 2019, Vol. 52 ›› Issue (4): 602-615.doi: 10.3864/j.issn.0578-1752.2019.04.003

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Evaluation of 317 Sugarcane Germplasm Based on Agronomic Traits Rating Data

ZHAO Yong,ZHAO PeiFang,HU Xin,ZHAO Jun,ZAN FengGang,YAO Li,ZHAO LiPing,YANG Kun,QIN Wei,XIA HongMing,LIU JiaYong()   

  1. Sugarcane Research Institute, Yunnan Academy of Agricultural Sciences/Yunnan Key Laboratory of Sugarcane Genetic Improvement, Kaiyuan 661699, Yunnan
  • Received:2018-09-04 Accepted:2018-12-15 Online:2019-02-16 Published:2019-02-27
  • Contact: JiaYong LIU E-mail:lljjyy1976@163.com

Abstract:

【Objective】Evaluation of sugarcane germplasm via rapid rating their important agronomic traits could provide reference for their further evaluation hybridization.【Method】Based on the field experiment, 317 sugarcane germplasm resources (2 replicates) were rated and evaluated by selecting five important agronomic traits at maturity stage, which were plant height, stalk diameter, millable stalks, leaf disease degree (comprehensive reflection of natural leaf diseases such as mosaic, rust, brown stripe disease) and general vigor. Each trait was divided into five grades, in which plant height was highest in grade 1, and the shortest in grade 5; similarly, stalk diameter was thickest in grade 1 and finest in grade 5; millable stalk was the most in grade 1 and the least in grade 5; general vigor was the best in grade 1 and the worst in grade 5; leaf diseases were the best in grade 1 and the worst in grade 5. The rating of each trait was accomplished by the members of the rating group. Based on the rating data of agronomic traits, 317 germplasm resources were comprehensively evaluated by statistical methods such as variance, broad-sense heritability, principal component analysis, clustering and discriminant analysis, and the germplasm resources with excellent agronomic traits were screened. Further, the sucrose content of the selected excellent germplasm was evaluated by primary rotation.【Result】The results of variance and broad-sense heritability analysis showed significant differences among 317 sugarcane germplasm in the classification data of agronomic traits (P<0.01) and the broad-sense heritability ranged from 0.61 to 0.72. The stalk diameter performed the highest broad-sense heritability (0.72) and the plant height performed the lowest (0.61). The results of principal component analysis showed that the five agronomic traits could be simplified to one principal component factor, i.e. the comprehensive superposition of five agronomic traits. The information provided by the principal component accounted for 63.57% of the total information, and the characteristic roots were significantly higher than the sum of the characteristic roots of other principal components. Based on the results of principal component analysis, 317 germplasms were classified into five categories, including 20 in the first category, 97 in the second category, 82 in the third category, 80 in the fourth category and 38 in the fifth category. 117 germplasm in the first and the second categories were the best in agronomic traits (36.91% of the total germplasms). The stepwise discriminant analysis of clustering results showed that the average probability of pairing is 95.85%. The clustering results fully reflected the actual performance of germplasm in field experiments. Based on cluster analysis of agronomic traits, the sucrose content of 117 germplasm in Class I and Class II was evaluated. The results showed that the average sucrose content of 117 germplasms ranged from 5.0% to 17.10% from November to next March, the highest was YZ09-1601 (17.1%) and the lowest was CP79-318 (5.0%). There were 43 germplasm with an average sugar content of more than 15.0%, of which 11 were more than 16.0%.【Conclusion】Plant height, stalk diameter, millable stalks, leaf disease and general vigor are important agronomic traits reflecting the field performance of sugarcane germplasm resources. The rapid classification method based on important agronomic traits is a promising alternative for evaluating large number of sugarcane germplasm resources.

Key words: sugarcane, germplasm, rating data, broad sense heritability, principal component analysis, cluster analysis

Table 1

Reference of important agronomic traits rank"

性状Traits 范围Range 分级Rank
株高
Plant height (cm)
≥280 1
220—280 2
160—220 3
100—160 4
≤100 5
茎径
Stalk diameter (cm)
≥3.0 1
2.5—3.0 2
2.0—2.5 3
1.5—2.0 4
≤1.5 5
有效茎
Millable stalks (条/m)
≥10 1
8—9 2
6—7 3
4—5 4
≤3 5
叶部病害程度
Leaf disease (%)
≤5 1
5—10 2
10—20 3
20—30 4
≥30 5
总体生势
General vigor
基于对性状的观察,对种质材料进行综合评价并分级
The comprehensive evaluation of the germplasms based on the observation of four traits
1
2
3
4
5

Table 2

Variance and genetic variance analysis of agronomic traits"

农艺性状
Agronomic traits
平均值
Averages
变异系数
Coefficient of variation (%)
遗传方差
Genetic variance
广义遗传力
Broad-sense heritability
株高Plant height 2.39** 31.01 0.34 0.61
叶部病害程度Leaf disease 2.95** 29.70 0.53 0.69
有效茎Millable stalks 3.02** 23.23 0.31 0.64
茎径Stalk diameter 2.79** 28.01 0.44 0.72
总体生势General vigor 2.91** 27.70 0.45 0.69

Table 3

Analysis of phenotype correlation coefficients among general vigor and others agronomic traits"

农艺性状
Agronomic traits
与总体生势的相关系数
Correlation coefficients with general vigor
茎径Stalk diameter 0.73**
有效茎Millable stalks 0.78**
叶部病害程度Leaf disease 0.46**
株高Plant height 0.68**

Table 4

Compute eigenvalues and eigenvectors of 5 traits in the principal component analysis"

农艺指标
Agronomic traits
第一主成分
First component
第二主成分
Second component
第三主成分
Third component
第四主成分
Fourth component
第五主成分
Fifth component
总体生势(X1)General vigor 0.52 -0.26 0.02 -0.19 -0.79
茎径(X2)Stalk diameter 0.41 -0.43 0.68 0.11 0.41
有效茎(X3)Millable stalks 0.47 -0.06 -0.50 -0.57 0.45
叶部病害(X4)Leaf disease 0.36 0.86 0.35 -0.11 -0.01
株高(X5)Plant height 0.46 0.07 -0.40 0.79 0.08
百分率Percentage (%) 63.57 13.56 12.12 7.41 2.34
累计百分率Cumulative percentage (%) 63.57 77.13 90.25 97.66 100
特征根Eigenvectors 3.18 0.68 0.66 0.37 0.12
PP value 0.00 0.00 0.00 0.00 1.00

Table 5

The average of principal component comprehensive and the primary grade on the five groups"

类群
Groups
主成分综合得分(均值)
Principal component comprehensive scores (average)
原始分级数据(均值)Primary grade data(average)
总体生势
General vigor
茎径
Stalk diameter
有效茎
Millable stalks
叶部病害程度
Leaf disease
株高
Plant height
第Ⅰ类群Ⅰ group -3.10 1.68 1.88 1.93 1.93 1.30
第Ⅱ类群Ⅱ group -1.45 2.25 2.33 2.53 2.52 1.95
第Ⅲ类群Ⅲ group -0.14 2.87 2.70 3.04 2.89 2.31
第Ⅳ类群Ⅳ group 1.10 3.43 3.16 3.38 3.28 2.71
第Ⅴ类群Ⅴ group 3.31 4.26 3.86 4.04 4.03 3.63

Fig. 1

Comprehensive scores of 317 germplasm resources based on the principal component analysis"

Table 6

Discriminant classification of 5 groups."

来自\判为
Come\Go
第Ⅰ类群
Ⅰ group
第Ⅱ类群
Ⅱ group
第Ⅲ类群
Ⅲ group
第Ⅳ类群
Ⅳ group
第Ⅴ类群
Ⅴ group
小计(份)
Total (piece)
正确率
Accuracy (%)
第Ⅰ类群Ⅰ group 18 2 0 0 0 20 90.00
第Ⅱ类群Ⅱ group 0 92 5 0 0 97 94.85
第Ⅲ类群Ⅲ group 0 0 82 0 0 82 100.00
第Ⅳ类群Ⅳ group 0 0 5 75 0 80 93.73
第Ⅴ类群Ⅴ group 0 0 0 2 36 38 94.76
平均判对概率
Average accuracy
95.85

Table 7

Primary traits grades of the excellent germplasm resources and sugar content (average)"

种质资源
Germplasm
级别
Grade
总体生势
General vigor
茎径
Stalk diameter
有效茎
Millable stalks
叶部病害
Leaf disease
株高
Plant height
甘蔗糖分
Sugar content (%)
CP73-2109* 1 2.0 2.5 2.5 2.0 1.0 12.2
F170* 1 1.5 2.5 2.5 2.5 1.5 13.3
FR93-761* 1 2.0 2.0 2.0 1.5 1.0 14.0
PHil60-19* 1 2.0 2.0 2.0 1.5 1.5 12.2
Q124* 1 1.5 2.5 2.5 2.0 1.5 15.1
Q172* 1 2.0 1.5 1.5 2.0 1.0 14.3
Q179* 1 1.5 2.5 2.5 2.5 1.0 15.1
Q189* 1 2.0 2.0 2.0 2.0 1.0 14.6
Q197* 1 2.0 1.5 1.5 2.0 1.0 13.9
ROC4* 1 2.0 1.5 1.5 2.5 1.5 13.8
SP80-3280* 1 1.5 2.0 2.0 2.0 1.0 14.6
HN 54-11* 1 2.0 2.5 2.5 3.0 1.0 13.9
YT00-318* 1 1.5 1.5 1.5 2.0 2.0 14.9
YT 89-240* 1 1.5 2.5 2.5 1.0 1.5 15.3
YT 93-159* 1 1.5 1.5 1.5 3.0 2.0 16.2
YZ01-1413* 1 1.5 2.0 2.0 1.5 1.5 14.2
YZ 06-160* 1 1.5 1.5 1.5 1.5 1.5 14.0
YZ 08-1095* 1 1.0 1.5 1.5 1.0 1.0 13.4
YZ 08-1609* 1 1.0 1.0 1.0 1.0 1.0 15.4
YZ 09-1028* 1 2.0 2.0 2.0 2.0 1.5 14.8
CO1001 2 3.0 3.0 3.0 3.0 1.0 10.2
CO281 2 2.5 2.0 2.0 2.0 2.0 13.7
CO419 2 2.5 2.0 2.0 4.5 2.0 13.3
CP00-1301 2 3.0 2.5 2.5 1.5 3.0 14.8
CP00-2459 2 2.5 2.5 2.5 3.0 2.0 13.2
CP29-116 2 3.0 3.0 3.0 1.5 1.0 11.6
CP33-310* 2 1.5 2.5 2.5 2.0 2.5 12.4
CP34-120* 2 2.0 2.0 2.0 3.5 2.0 14.3
CP40-10 2 2.5 2.5 2.5 2.5 2.0 12.1
CP44-154 2 2.5 3.0 3.0 2.0 1.5 13.1
CP51-22 2 3.5 2.5 2.5 1.5 1.0 8.0
CP73-351* 2 1.5 2.5 2.5 2.0 2.5 13.9
种质资源
Germplasm
级别
Grade
总体生势
General vigor
茎径
Stalk diameter
有效茎
Millable stalks
叶部病害
Leaf disease
株高
Plant height
甘蔗糖分
Sugar content (%)
CP77-1776 2 2.5 2.5 2.5 2.5 1.5 14.4
CP79-318 2 3.0 1.5 1.5 3.0 1.0 5.0
CP88-1834* 2 2.0 2.0 2.0 3.0 2.5 15.4
CP88-1834* 2 2.0 2.0 2.0 3.0 2.5 15.4
CP88-1884 2 2.5 2.0 2.0 3.0 2.5 15.2
CP89-1509 2 2.5 2.5 2.5 2.5 1.5 11.0
CP89-2143* 2 2.0 2.5 2.5 2.5 2.0 16.3
CP92-1167* 2 2.0 2.0 2.0 2.5 2.0 14.0
CP94-1100* 2 2.0 2.0 2.0 2.0 2.0 15.5
F134* 2 2.0 3.0 3.0 2.5 2.0 12.9
F146 2 2.5 2.5 2.5 4.0 2.0 14.6
F172* 2 2.0 2.0 2.0 1.5 1.5 13.6
FR97-41* 2 2.0 3.0 3.0 2.0 2.5 12.5
FR97-53 2 3.0 2.5 2.5 1.5 2.0 15.4
FR99-116* 2 2.0 2.5 2.5 3.0 2.0 12.8
KQ01-1261 2 2.5 3.0 3.0 2.0 2.5 15.8
KQ01-1390* 2 2.0 3.0 3.0 1.5 2.5 15.3
KQ99-1474 2 3.0 3.0 3.0 2.5 2.0 14.2
PHil63-17* 2 2.0 2.5 2.5 2.0 2.0 12.8
PHil72-446* 2 2.0 2.5 2.5 1.5 2.0 11.1
PHil72-78 2 2.5 2.5 2.5 1.5 3.0 14.6
Poj2725* 2 2.0 3.0 3.0 2.0 2.0 13.6
Poj2836* 2 2.0 2.0 2.0 2.0 1.5 12.2
Q121* 2 2.0 2.0 2.0 3.5 2.5 16.0
Q127* 2 2.0 2.0 2.0 2.0 2.0 15.8
Q152* 2 2.0 2.0 2.0 2.5 1.5 14.8
Q183* 2 2.0 2.0 2.0 2.5 1.5 16.0
Q188* 2 2.0 2.5 2.5 3.0 1.5 15.8
Q196 2 2.5 3.0 3.0 3.0 1.5 14.7
Q199 2 2.5 2.5 2.5 3.5 1.5 13.3
Q202* 2 2.0 2.5 2.5 3.5 2.0 13.9
Q206 2 2.5 2.5 2.5 2.0 2.5 15.5
RB72-454* 2 2.0 2.5 2.5 2.0 1.5 13.6
RB73-5275* 2 2.0 2.5 2.5 3.0 2.5 11.3
RB75-15 2 2.5 3.0 3.0 2.5 1.0 14.4
RB76-5418 2 2.5 2.0 2.0 2.5 2.0 12.1
RB83-5089 2 2.5 2.5 2.5 2.0 1.5 13.3
种质资源
Germplasm
级别
Grade
总体生势
General vigor
茎径
Stalk diameter
有效茎
Millable stalks
叶部病害
Leaf disease
株高
Plant height
甘蔗糖分
Sugar content (%)
RB84-5257 2 2.5 2.0 2.0 2.5 2.0 12.2
RB85-5156* 2 1.5 1.5 1.5 4.0 2.0 14.8
ROC16 2 2.5 2.0 2.0 1.5 2.0 15.7
ROC23* 2 2.0 3.0 3.0 2.0 2.5 15.2
ROC3* 2 2.0 2.5 2.5 1.5 2.0 14.3
ROC9* 2 2.0 2.5 2.5 2.5 2.0 13.7
SP70-1143 2 3.0 2.0 2.0 2.0 2.0 13.1
VMC74-527 2 2.5 2.5 2.5 3.0 1.5 14.1
VMC 88-354 2 2.5 2.5 2.5 3.0 2.0 13.5
VMC 95-105 2 3.0 2.5 2.5 2.0 1.5 14.8
VMC 95-36* 2 2.0 3.0 3.0 2.5 2.5 14.0
VMC 95-88* 2 2.0 2.5 2.5 2.0 2.0 14.2
VMC 96-60 2 2.5 3.0 3.0 3.0 1.5 9.9
CT57-416 2 2.5 2.5 2.5 2.0 2.5 14.6
DZ03-83* 2 1.5 2.5 2.5 2.5 2.0 14.8
DZ93-88* 2 1.5 2.5 2.5 3.5 2.5 16.6
FN38 2 2.5 3.0 3.0 2.5 2.0 15.1
FN39 2 2.5 3.0 3.0 3.0 2.0 15.4
GZ81-871* 2 2.0 3.0 3.0 2.5 1.5 15.1
GZ91-2* 2 2.0 2.5 2.5 2.5 1.5 11.9
GZ02-70* 2 2.0 3.0 3.0 2.5 2.0 16.3
GZ65-542 2 2.5 2.5 2.5 3.5 2.0 15.6
GZ75-65 2 2.5 2.0 2.0 3.0 1.0 15.9
GZ95-108* 2 2.0 2.0 2.0 3.0 2.0 15.0
GT02-351* 2 2.0 2.0 2.0 3.0 3.0 15.2
GT 02-467* 2 2.0 3.0 3.0 2.0 2.0 15.2
GT 11 2 2.5 2.0 2.0 2.0 1.5 15.3
GT 69-360* 2 2.0 3.0 3.0 1.5 2.0 12.1
GT 84-332* 2 2.0 3.0 3.0 4.5 1.5 16.0
GT 89-5* 2 2.0 2.5 2.5 2.0 2.0 15.3
GT94-119 2 2.5 3.0 3.0 2.5 1.5 14.5
GT96-211* 2 1.5 2.5 2.5 3.0 2.0 14.7
GT97-69 2 2.5 3.0 3.0 3.0 2.5 14.4
LC03-1137* 2 1.5 2.5 2.5 3.0 1.5 14.9
种质资源
Germplasm
级别
Grade
总体生势
General vigor
茎径
Stalk diameter
有效茎
Millable stalks
叶部病害
Leaf disease
株高
Plant height
甘蔗糖分
Sugar content (%)
LC05-136 2 2.5 3.0 3.0 2.0 2.0 15.4
MT69-421* 2 2.0 2.5 2.5 2.5 2.0 16.1
MT70-611* 2 2.0 3.0 3.0 2.0 1.5 15.4
MT00-236 2 2.5 3.0 3.0 1.5 2.5 15.3
MT96-86 2 2.5 3.0 3.0 1.5 3.0 13.1
YZ06-80* 2 2.0 3.0 3.0 2.5 2.5 15.6
YZ08-2060 2 2.5 3.0 3.0 2.5 1.5 14.8
YZ09-1601* 2 1.5 2.0 2.0 4.5 2.5 17.1
YZ11-1779 2 2.5 3.0 3.0 2.0 2.0 16.4
YZ64-24* 2 2.0 2.5 2.5 2.5 2.0 15.3
YZ65-225* 2 2.0 2.5 2.5 3.5 2.5 14.3
YZ71-998* 2 2.0 2.5 2.5 3.0 2.0 16.7
YZ89-351 2 2.5 3.0 3.0 2.5 2.0 14.5
YZ89-7 2 2.5 2.5 2.5 2.5 1.5 15.3
YZ94-375 2 2.5 3.0 3.0 3.5 1.5 14.2
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