Scientia Agricultura Sinica ›› 2010, Vol. 43 ›› Issue (10): 2105-2114 .doi: 10.3864/j.issn.0578-1752.2010.10.017

• HORTICULTURE • Previous Articles     Next Articles

Cloning, Subcellular Localization and Expression Analysis of SPL9 and SPL13 Genes from Poncirus trifoliata

SONG Chang-nian, QIAN Jian-lin, FANG Jing-gui, WANG Hua-kun, QIU Xue-lin, ZHANG Zhen, ZHANG Xiao-ying
  

  1. (南京农业大学园艺学院)
  • Received:2009-12-01 Revised:2010-03-10 Online:2010-05-15 Published:2010-05-15
  • Contact: FANG Jing-gui

Abstract: 【Objective】 This study aimed to clone two full length cDNA of SPL9 and SPL13 SBPs (SQUAMOSA promoter binding proteins) transcription factors from Poncirus trifoliata (L.) Raf. and construct expression vectors of SPL9 and SPL13 for subcellular location analysis. Real time PCR was used to determine the tissue expression patterns of SPL9 and SPL13 for analysis of the role of SPL9 and SPL13 during growth and development in adult P. trifoliata. 【Method】 Bioinformatics analysis and RACE technology showed that the complete cDNAs cloned, designated as Pt-spl9 and Pt-spl13, was 1 519 bp and 1 824 bp in length, respectively. The sequences were deposited in GenBank database with accession no. of FJ502237 and FJ502238. Recombinant plasmid 35S-GW-FJ502237/FJ502238-GFP was introduced into onion epidermal cells by the particle bombardment method with a PDS1000/He. Transformed cells were incubated for 24 h at 22℃ in the dark and green fluorescence was monitored under a laser scanning confocal microscope. The SYBR Green I Real-time qRT-PCR was employed to analyze the expression of Pt-SPL9 and Pt-SPL13 in young leaf, stem, root, bud flower, flower, fruit and other organs. 【Result】 Bioinformatics analysis showed that the cDNA of Pt-SPL9 and Pt-SPL13 had the recognition sites of microRNA156. The deduced amino acid sequence of Pt-SPL9 and Pt-SPL13 were 388 and 379 residues, which were 48.9 %, 42.5 %, 41.7 % identical, respectively, with SPL9 of Antirrhinum majus, Arabidopsis thaliana and Zea mays; and 40.8%, 38.1%, 35.8% identical respectively with SPL13 of Arabidopsis thaliana, SPL16 of Oryza sativa, and TGA1 of Zea mays, respectively. Pt-SPL9 and Pt-SPL13 and other plant SBPs have the same amino acid sequences that are highly conserved as the designed SBP domain and two-way nuclear localization signal. Subcellular localization results showed that the Pt-SPL9 and Pt-SPL13 were localized in the nucleus. SYBR Green I real-time quantitative RT-PCR results showed that the Pt-SPL9 and Pt-SPL13 were expressed ubiquitously in various organs and tissues, but the expression levels were different. The expression of Pt-SPL9 was highest in the stem, and lower in flowers and leaves, and lowest in the root, flower buds and young fruit; Pt-SPL13 was expressed highest in young fruit, and the expression levels in the stems and flower buds were high too. Its expression level in leaves was not high and those in flowers and roots were very low. 【Conclusion】 Transcription factor Pt-SPL9 and Pt-SPL13 all have nuclear localization function, Pt-SPL9 and Pt-SPL13 might play important roles in trifoliate orange development.

Key words: Poncirus trifoliata, SPL9 and SPL13, subcellular localization, real-time RT-PCR

[1] WANG YiDan,YANG FaLong,CHEN DiShi,XIANG Hua,REN YuPeng. One-Step Multiple TaqMan Real-time RT-PCR for Simultaneous Detection of Swine Diarrhea Viruses [J]. Scientia Agricultura Sinica, 2023, 56(1): 179-192.
[2] GUO ShaoLei,XU JianLan,WANG XiaoJun,SU ZiWen,ZHANG BinBin,MA RuiJuan,YU MingLiang. Genome-Wide Identification and Expression Analysis of XTH Gene Family in Peach Fruit During Storage [J]. Scientia Agricultura Sinica, 2022, 55(23): 4702-4716.
[3] ZHANG Rui,ZHANG XueYao,ZHAO XiaoMing,MA EnBo,ZHANG JianZhen. Antibody Preparation and Subcellular Localization of LmKnk3-5′ in Locusta migratoria [J]. Scientia Agricultura Sinica, 2022, 55(2): 329-338.
[4] XIAO GuiHua,WEN Kang,HAN Jian,HAO ChenXing,YE RongChun,ZHU YiChi,XIAO ShunYuan,DENG ZiNiu,MA XianFeng. Effects of Calcium on Growth and Development of Poncirus trifoliata and Resistance to Citrus Canker [J]. Scientia Agricultura Sinica, 2022, 55(19): 3767-3778.
[5] XU HuanHuan,LI Yi,GAO Wei,WANG YongQin,LIU LeCheng. Cloning and Identification of γ-Glutamyl Transpeptidase AcGGT Gene from Onion (Allium cepa) [J]. Scientia Agricultura Sinica, 2021, 54(19): 4169-4178.
[6] WANG Hao,YIN Lian,LIU JieXia,JIA LiLi,DING Xu,SHEN Di,FENG Kai,XU ZhiSheng,XIONG AiSheng. The Carotenoid Cleavage Dioxygenases Gene AgCCD4 Regulates the Pigmentation of Celery Tissues with Different Colors [J]. Scientia Agricultura Sinica, 2021, 54(15): 3279-3294.
[7] SUN HongYing,WANG Yan,LI WeiJia,ZHU TianShu,JIANG Ying,XU Yan,WU QingYue,ZHANG ZhiHong. Expression Characteristics and Function of FveD27 in Woodland Strawberry [J]. Scientia Agricultura Sinica, 2021, 54(10): 2179-2191.
[8] YUAN XinBo,CHENG TingTing,XI XiaoHan,CHEN ZhangYu,WANG RuiHong,KE WeiDong,GUO HongBo. Screening of Polyphenol Oxidase Interaction Proteins from Nelumbo nucifera and Their Verification [J]. Scientia Agricultura Sinica, 2020, 53(18): 3777-3791.
[9] LIU JiaoJiao,WANG XueMin,MA Lin,CUI MiaoMiao,CAO XiaoYu,ZHAO Wei. Isolation, Identification, and Response to Abiotic Stress of MsWRKY42 Gene from Medicago sativa L. [J]. Scientia Agricultura Sinica, 2020, 53(17): 3455-3466.
[10] GE Ting,HUANG Xue,XIE RangJin. Cloning, Subcellular Localization and Expression Analysis of CitPG34 in Citrus [J]. Scientia Agricultura Sinica, 2019, 52(19): 3404-3416.
[11] JIANG MengTing,ZHU Ning,GONG HongYong,HOU YingJun,YU XinYi,QU ShenChun. Cloning and Function Analysis of Gibberellin Insensitive DkGAI2 Gene in Nantongxiaofangshi (Diospyros kaki Linn. cv. nantongxiaofangshi) [J]. Scientia Agricultura Sinica, 2019, 52(19): 3417-3429.
[12] CAO XiongJun, LU XiaoPeng, XIONG Jiang, LI Jing, XIE ShenXi. The Poncirus trifoliata (L.) Raf. NIN-Like Protein Transcription Factors Responses to Drought Stress and Bind the Nitrate-Responsive Cis-element [J]. Scientia Agricultura Sinica, 2018, 51(17): 3370-3378.
[13] WEI ZhouLing, PENG HaoRan, PAN Qi, ZHANG YongZhi, PU YunDan, WU GenTu, QING Ling, SUN XianChao. Subcellular Localization of the Ribosome-Inactivating Protein α-MC and Its Antiviral Effect on TMV [J]. Scientia Agricultura Sinica, 2017, 50(5): 840-848.
[14] LIU Wei, LIU Hao, DONG ShuangYu, GU FengWei, CHEN ZhiQiang, WANG JiaFeng, WANG Hui. Construction of Rice Leaf Sheath Protoplast Transformation System and Transient Expression of Pik-H4 and AvrPik-H4 Proteins [J]. Scientia Agricultura Sinica, 2017, 50(23): 4575-4584.
[15] PENG HaoRan, PU YunDan, ZHANG YongZhi, XUE Yang, WU GaiXia, QING Ling, SUN XianChao. Subcellular Localization and Expression Analyses of IP-L Protein Interacting with ToMV Coat Protein [J]. Scientia Agricultura Sinica, 2017, 50(17): 3344-3351.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!