Scientia Agricultura Sinica ›› 2009, Vol. 42 ›› Issue (8): 2763-2770 .doi: 10.3864/j.issn.0578-1752.2009.08.015

• PLANT PROTECTION • Previous Articles     Next Articles

SSR Analysis of Population Genetic Diversity of Puccinia striiformis f.sp.tritici in Longnan Region of Gansu,China

LU Ning-hai, ZHENG Wen-ming, WANG Jian-feng, ZHAN Gang-ming, HUANG Li-li,KANG Zhen-sheng
  

  1. (西北农林科技大学植物保护学院)
  • Received:2008-11-20 Revised:2009-01-22 Online:2009-08-10 Published:2009-08-10
  • Contact: KANG Zhen-sheng

Abstract:

【Objective】 As Longnan region of Gansu province is one of the largest and most important over-summering areas of Puccinia striiformis f. sp. tritici in China, the objective of this study is to determine the genetic structure of P. striiformis f. sp. tritici populations in this region. 【Method】 Population genetic diversity of the P. striiformis f.sp. tritici population containing 409 isolates collected from 8 different areas in Longnan, Gansu province was investigated with TP-M13-SSR technique. 【Result】 For the Longnan population, the average number of alleles (Na) per locus was 1.95, and the effective number of alleles (Ne) was 1.43. The Nei's gene diversity (H) and Shannon's information index (I) were 0.27 and 0.41, respectively. The genetic diversity of Wudu, Wenxian and Qingcheng populations was much higher than that of Huixian, Chengxian and Xihe populations. Analysis of AMOVA showed that there were about 12.5% of the total variations among the collections, 87.5% of the total variation presented within collections. Gen flow (Nm) was 1.83. 【Conclusion】 The important conclusion is that the populations of P. striifornis f. sp. tritici possessed relatively high levels of genetic diversity but a lower genetic differentiation in Longnan of Gansu. The main genetic variation presented within collections. There is an extensive gene flow and migration of pathogen among the regions in Longnan of Gansu.

Key words: Puccinia striiformis f.sp.trtici, population genetic diversity, SSR marker

[1] ZhiJun XU,Sheng ZHAO,Lei XU,XiaoWen HU,DongSheng AN,Yang LIU. Discovery of Microsatellite Markers from RNA-seq Data in Cultivated Peanut (Arachis hypogaea) [J]. Scientia Agricultura Sinica, 2020, 53(4): 695-706.
[2] HUANG MiaoMiao,CHEN WanQuan,CAO ShiQin,SUN ZhenYu,JIA QiuZhen,GAO Li,LIU Bo,LIU TaiGuo. Surveillance and Genetic Diversity Analysis of Puccinia striiformis f. sp. tritici in Gansu and Qinghai Provinces [J]. Scientia Agricultura Sinica, 2020, 53(18): 3693-3706.
[3] LIU XiQiang, ZHANG Han, WANG XueMin, YI DengXia, WANG Zan. Association Mapping of Fall Dormancy with SSR Markers in Alfalfa (Medicago sativa L.) [J]. Scientia Agricultura Sinica, 2018, 51(2): 226-232.
[4] YANG ZiBo, WANG AnBang, LENG SuFeng, GU ZhengZhong, ZHOU YangMei. Genetic Analysis of the Novel High-Yielding Wheat Cultivar Huaimai33 [J]. Scientia Agricultura Sinica, 2018, 51(17): 3237-3248.
[5] XUE YanTao, LU Ping, QIAO ZhiJun, LIU MinXuan, WANG RuiYun. Genetic Diversity and Genetic Relationship of Broomcorn Millet (Panicum miliaceum L.) Germplasm Based on SSR Markers [J]. Scientia Agricultura Sinica, 2018, 51(15): 2846-2859.
[6] LIU WenPing, Lü Wei, LI DongHua, REN GuoXiang, ZHANG YanXin, WEN Fei, HAN JunMei, ZHANG XiuRong. Drought Resistance of Sesame Germplasm Resources and Association Analysis at Adult Stage [J]. Scientia Agricultura Sinica, 2017, 50(4): 625-639.
[7] LIU Huan, ZHANG XinQuan, MA Xiao, ZHANG RuiZhen, HE GuangWu, PAN Ling, JIN MengYa. Construction of EST-SSR Fingerprinting Based on Fluorescence Detection Technology for Italian Ryegrass [J]. Scientia Agricultura Sinica, 2017, 50(3): 437-450.
[8] WEN Xin, DENG Shu, ZHANG ChunFen, HOU LiYuan, SHI JiangPeng, NIE YuanJun, XIAO Rong, QIN YongJun, CAO QiuFen. Regeneration of New Germplasms Using Anther Culture of Apple Cultivar ‘Gala’ [J]. Scientia Agricultura Sinica, 2017, 50(14): 2793-2806.
[9] LIAN Shuai, LU Ping, QIAO Zhi-jun, ZHANG Qi, ZHANG Qian, LIU Min-xuan, WANG Rui-yun. Genetic Diversity in Broomcorn Millet (Panicum miliaceum L.) from China and Abroad by Using SSR Markers [J]. Scientia Agricultura Sinica, 2016, 49(17): 3264-3275.
[10] LIU Xiu-yun, LI Hui, LIU Zhi-guo, ZHAO Jin, LIU Meng-jun. Genetic Diversity and Structure of 255 Cultivars of Ziziphus jujuba Mill. [J]. Scientia Agricultura Sinica, 2016, 49(14): 2772-2791.
[11] HU Zhen-bang, GAO Yun-lai, QI Zhao-ming, JIANG Hong-wei, LIU Chun-yan, XIN Da-wei, HU Guo-hua, PAN Xiao-cheng, CHEN Qing-shan. Software Development of -ID Analysis for Crop Molecular Identity Construction [J]. Scientia Agricultura Sinica, 2016, 49(12): 2255-2266.
[12] LI Zong-yan1, QIN Yan-ling1, MENG Jin-fang2, TANG Dai1, WANG Jin1. Study on the Origin of Tree Peony Cultivars from Southwest China Based on ISSR Technology [J]. Scientia Agricultura Sinica, 2015, 48(5): 931-940.
[13] XING Jun, CHANG Hui-lin, WANG Jing-guo, LIU Hua-long, SUN Jian, ZHENG Hong-liang, ZHAO Hong-wei, ZOU De-tang. QTL Analysis of Na+ and K+ Concentrations in japonica Rice   Under Salt and Alkaline Stress [J]. Scientia Agricultura Sinica, 2015, 48(3): 604-612.
[14] WANG Ling, ZUO Shi-min, ZHANG Ya-fang, CHEN Zong-xiang, HUANG Shi-wen, PAN Xue-biao. SSR Analysis of Population Genetic Structure of Rice Sheath Blight Causing Agent Rhizoctonia solani AG1-IA Collected from Eight Provinces (Autonomous Region) in Southern China [J]. Scientia Agricultura Sinica, 2015, 48(13): 2538-2548.
[15] LIU Juan, LIAO Kang, ZHAO Shi-rong, CAO Qian, SUN Qi, LIU Huan. The Core Collection Construction of Xinjiang Wild Apricot Based on ISSR Molecular Markers [J]. Scientia Agricultura Sinica, 2015, 48(10): 2017-2028.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!