Scientia Agricultura Sinica ›› 2010, Vol. 43 ›› Issue (1): 1-11 .doi: 10.3864/j.issn.0578-1752.2010.01.001

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS •     Next Articles

Microarray Analysis of Gene Expression Profile Related to Grain Storage Metabolism in Rice Endosperms as Affected by High Temperature at Filling Stage

WEI Ke-su, CHENG Fang-min, DONG Hai-tao, ZHANG Qi-fang, LIU Kui-gang, CAO Zhen-zhen
  

  1. (浙江大学农业与生物技术学院)
  • Received:2009-03-30 Revised:2009-04-23 Online:2010-01-10 Published:2010-01-10
  • Contact: CHENG Fang-min

Abstract:

【Objective】 Effects of high temperature after rice flowering stage on the expression profile and their patterns of mass genes related to grain storage metabolism were clarified. 【Method】 A cDNA array of 3574 unigenes containing was used for the detection of different filling grain samples and the controlled temperature treatments were conducted in growth chambers, with the daily mean temperature being controlled at 32℃(36℃/28℃) and 22℃(26℃/18℃) for high and moderate temperatures, respectively. 【Result】 The expression levels of majority genes were not sensitive to high temperature treatment among 657-673 candidate genes, with their R value (the ratio of gene hybridized signal between two temperature treatments) ranging from 0.8 to 1.2. However, the different expression genes (up-regulation or down-regulation) increased remarkably when rice plants were consistently exposed to high temperature treatment. There was a considerable difference in gene expression patterns of grain starch synthesis and carbohydrate metabolism induced by high temperature treatment after flowering stage, varied greatly with different gene function classification, metabolizing pathway, iso-form types (or subunit) and also filling stage, in which such genes imposing sugar signal function, with much wide variation in expression levels between two temperature treatment, were more sensitive to high temperature than those genes in relation with grain starch synthesis and other carbohydrate metabolism. The expressing response of storage protein genes to high temperature was mostly down-regulation, despite different patterns for some protein subunit. For all genes related to grain protein synthesis metabolism, these genes impacting ribosomal protein and defense protein synthesis were mostly sensitive to different temperature treatments or strongly-high specific expression induced by high temperature at filling stage. 【Conclusion】 There is a complex regulating network existing in the effects of high temperature stress on mass genes related to grain storage metabolism, with many genes being probably regulated by high temperature.

Key words: rice (Oryza sativa L.), high temperature, gene expression, cDNA-microarray, grain storage metabolism

[1] WANG JiaNuo, CHEN GuiPing, LI Pan, WANG LiPing, NAN YunYou, HE Wei, FAN ZhiLong, HU FaLong, CHAI Qiang, YIN Wen, ZHAO LiaoHao. Photo-Physiological Mechanism at Grain Filling Stage of No-Tillage with Plastic Re-Mulching to Increase Maize Yield in Oasis Irrigation Areas [J]. Scientia Agricultura Sinica, 2026, 59(6): 1189-1202.
[2] CUI ShiYou, CHEN PengJun, MIAO YuanQing, HAN JiJun, SHEN JunMing. Development and Field Evaluation of Glyphosate-Resistant Wheat Germplasm Generated Through EMS Mutagenesis [J]. Scientia Agricultura Sinica, 2026, 59(4): 723-733.
[3] LIAO TingLu, SHI YaFei, XIAO DongHao, SHE YangMengFei, GUO FuCheng, YANG JiuJu, TANG HaiJiang, LUO ChengKe. The Effect of Exogenous Nitroprusside on Sugar Metabolism in Rice Seedlings Under Alkaline Stress [J]. Scientia Agricultura Sinica, 2026, 59(2): 265-277.
[4] MENG Hui, LUO BingYu, LU ZhengYu, WANG Peng, KANG DongRu, ZHENG ChengShu, WANG WenLi. Cloning of CmASMT and Its Role in Thermotolerance of Chrysanthemum [J]. Scientia Agricultura Sinica, 2025, 58(8): 1617-1626.
[5] TANG Yu, LEI BiXin, WANG ChuanWei, YAN XuanTao, WANG Hao, ZHENG Jie, ZHANG WenJing, MA ShangYu, HUANG ZhengLai, FAN YongHui. Response Mechanism of Anthocyanin Accumulation in Colored Wheat to Post-Anthesis High Temperature Stress [J]. Scientia Agricultura Sinica, 2025, 58(6): 1083-1101.
[6] SU Ming, LI FanGuo, HONG ZiQiang, ZHOU Tian, LIU QiangJuan, BAN WenHui, WU HongLiang, KANG JianHong. Antioxidant Characterization of Nitrogen Application for Mitigating Potato Senescence Post-Flowering Under High Temperature Stress [J]. Scientia Agricultura Sinica, 2025, 58(4): 660-675.
[7] ZHANG TianYu, LI Bai, ZANG JinPing, CAO HongZhe, DONG JinGao, XING JiHong, ZHANG Kang. Genome-Wide Identification and Expression Analysis of HMG Family Genes in Botrytis cinerea [J]. Scientia Agricultura Sinica, 2025, 58(4): 704-718.
[8] ZHANG LinLin, GONG Rui, CUI YanLing, ZHONG XiongHui, LI Ye, LI RanHong, QIAN ZongWei. Effect Analysis of SmWRKY30 in Eggplant Resistance to Ralstonia solanacearum by Virus Induced Gene Silencing (VIGS) [J]. Scientia Agricultura Sinica, 2025, 58(3): 548-563.
[9] ZHANG XiangKun, LI JiaYing, QIAO RuMeng, HE JingLei, WANG Li, SHI XiaoXin, DU GuoQiang. Effects of GFabV Under Different Zn Levels on Photosynthetic Efficiency and Photosynthesis-Related Gene Expression of ‘Shine Muscat’ Grapevine [J]. Scientia Agricultura Sinica, 2025, 58(24): 5190-5200.
[10] DING Ning, QI EnFang, JIA XiaoXia, HUANG Wei, MA LiRong, LI JianWu, YAN RuNan. Screening and Identification of miRNAs in Potato Seedlings in Response to High Temperature Stress [J]. Scientia Agricultura Sinica, 2025, 58(22): 4589-4602.
[11] LEI BiXin, YU YongBo, ZHANG MingTong, CUI GuoJi, HONG JiaWen, HU Tao, YOU AiXin, ZHANG WenJing, MA ShangYu, HUANG ZhengLai, FAN YongHui. Impact of Post-Anthesis Heat Stress on Nitrogen Use Efficiency and Yield Components in Wheat [J]. Scientia Agricultura Sinica, 2025, 58(19): 3837-3856.
[12] ZHANG Jie, HU ChenXi, QI JianBo, ZHANG YongTai, CHEN YiBo, ZHANG YongJi. Effects of Exogenous Zeatin on Photosynthetic Parameter, Antioxidant System and Expression of Genes Related to Zeatin Synthesis in Pepper Under Low-Temperature Combined with Low-Light Stress [J]. Scientia Agricultura Sinica, 2025, 58(19): 3959-3969.
[13] LI PeiSong, LU YongDi, GUO Yu, ZHANG QiPeng, LIU TaoFen, WANG TianHe, YANG MingFeng, XIANG Dao, TIAN JingShan, ZHANG WangFeng. The Regional Distribution of Raw Cotton Quality in Xinjiang Based on Notarized Inspection Data for Cotton [J]. Scientia Agricultura Sinica, 2025, 58(1): 58-74.
[14] LI YongFei, LI ZhanKui, ZHANG ZhanSheng, CHEN YongWei, KANG JianHong, WU HongLiang. Effects of Postponing Nitrogen Fertilizer Application on Flag Leaf Physiological Characteristics and Yield of Spring Wheat Under High Temperature Stress [J]. Scientia Agricultura Sinica, 2024, 57(8): 1455-1468.
[15] CHEN BingXian, ZHANG Qi, DAI ZhangYan, ZHOU Xu, LIU Jun. Physiological and Molecular Effects of Salicylic Acid on Rice Seed Germination at Low Temperature [J]. Scientia Agricultura Sinica, 2024, 57(7): 1220-1236.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!