Scientia Agricultura Sinica ›› 2020, Vol. 53 ›› Issue (8): 1524-1531.doi: 10.3864/j.issn.0578-1752.2020.08.003

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Splicing Property Analyses of the NRSE1 Element from Tobacco PR3b mRNA After Fusion Expression with GUS Gene

ZHAO Xue1,WANG Feng2,WANG WenJing1,LIU XiaoFeng1,BIAN ShiQuan1,LIU YanHua1,LIU XinMin1,DU YongMei1,ZHANG ZhongFeng1,ZHANG HongBo1()   

  1. 1 Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, Shandong
    2 College of Agronomy and Biotechnology, Southwest University, Chongqing 400716
  • Received:2019-09-05 Accepted:2019-12-18 Online:2020-04-16 Published:2020-04-29
  • Contact: HongBo ZHANG E-mail:zhanghongbo@caas.cn

Abstract:

【Objective】Previously, a post-transcriptional splicing of tobacco PR3b gene was observed in the low-nicotine mutants (nic1, nic2) of Nicotiana tabacum L. cv. Burley 21, yet the mechanism underlying this phenomenon is still unclear. In this study, we developed transgenic plants expressing the fusion of the alternative splicing element NRSE1 (nicotine-synthesis related splicing element 1) from PR3b and the GUS gene to investigate the splicing properties of the NRSE1 element after excising from PR3b mRNA, in order to reveal its regulatory mechanism. 【Method】The NRSE1 element was amplified from PR3b cDNA by PCR amplification, and the vector for expressing the fusion of NRSE1 element and the GUS gene was constructed by molecular methods. And, the vector was used to develop transgenic plants expressing the fusion of NRSE1 element and GUS gene with wild type tobacco and the low-nicotine mutants nic1 and nic2 via agrobacterium (LBA4404) mediated transformation method. The transgenic plants were identified by RT-PCR and GUS staining, and the splicing of the fusion of NRSE1 element and GUS gene in the transgenic plants of wild type tobacco and low-nicotine mutants were then analyzed by RT-PCR. Seedlings of the transgenic plants were treated with ethylene (ET) and jasmonic acid (JA), respectively. And, the effects of ET and JA treatment on the GUS activity and the splicing of the fusion of NRSE1 element and GUS gene in the transgenic plants were analyzed by GUS staining and RT-PCR, respectively. The effects of ET and JA treatment on the expression level of the fusion of NRSE1 element and GUS gene were analyzed as well. 【Result】A set of transgenic wild type tobacco and low-nicotine mutants expressing the fusion of NRSE1 element and GUS gene were identified by RT-PCR and GUS staining. Further RT-PCR and sequencing analyses showed that the NRSE1 element could be alternatively spliced at higher levels in the low-nicotine mutants after fusion with the GUS gene, in a pattern consistent with its alternative splicing in the PR3b mRNA as previously report. ET and JA treatments could alter the GUS activity in the transgenic plants, but did not affect the inducible splicing of the NRSE1 element or the expression level of the fusion of NRSE1 element and GUS gene in the transgenic plants. 【Conclusion】 A highly splicing of the NRSE1 element was observed in the low-nicotine mutants after fusion expression with GUS gene. The alternatively splicing of NRSE1 element is independent of the rest regions of PR3b mRNA. ET and JA treatments had an effect on the GUS activities of the transgenic plants expressing the fusion of NRSE1 element and GUS gene, which may result from a translational regulation.

Key words: Nicotiana tabacum L., PR3b gene, low-nicotine mutant, alternative splicing, jasmonic acid, ethylene

Fig. 1

Schematic diagram of vector construction for the fusion of NRSE1 element and GUS gene A: The diagram of PR3b gene and the alternative splicing region, and the first spliced base are separated by 4 bases from the left 64 bases; B: Structural diagram of the vector expressing the fusion of NRSE1 element and GUS gene"

Fig. 2

PCR test of E. coli clones with recombination plasmids Marker indicates DNA molecular standards"

Fig. 3

Identification of transgenic plants A: Identification of transgenic plants by RT-PCR; B: Identification of transgenic plants by GUS staining. Ctrl indicates untransgenic wild type tobacco. WT+ indicates transgenic wild type tobacco; nic1 and nic2 indicate the transgenic plants of low-nicotine mutants. PR3b-GUS indicates the fusion of NRSE1 element and GUS gene"

Fig. 4

Molecular splicing analysis of the fusion of NRSE1 element and GUS in nic1 and nic2 mutants WT+ indicates transgenic wild type tobacco; nic1 and nic2 indicate the transgenic plants of low-nicotine mutants. Ctrl indicates untransgenic wild type tobacco. PR3b-GUS indicates the fusion of NRSE1 element and GUS gene. Asterisk indicates primer dimers"

Fig. 5

Effects of ET and JA treatment on the GUS activities of transgenic tobacco plants A: GUS activity of transgenic tobacco; B: Splicing analysis of the fusion of NRSE1 element and GUS. Asterisk indicates primer dimers; C: Relative expression of GUS gene after transgenic plants treated with ET and JA. WT+ indicates transgenic plant of wild type; nic1 and nic2 indicate transgenic plant of low-nicotine mutants. Mock indicates control treatment; ET and JA indicate ethylene and jasmonate treatment, respectively"

[1] JALALI B L, BHARGAVA S, KAMBLE A . Signal transduction and transcriptional regulation of plant defence responses. Journal of Phytopathology, 2006,154:65-74.
[2] 张玉, 杨爱国, 冯全福, 蒋彩虹, 耿锐梅, 罗成刚 . 植物病程相关蛋白及其在烟草中的研究进展. 生物技术通报, 2012(5):20-24.
ZHANG Y, YANG A G, FENG Q F, JIANG C H, GENG R M, LUO C G . Plant pathogenesis-related proteins and research progress in tobacco. Biotechnology Bulletin, 2012(5):20-24. (in Chinese)
[3] MARTIN G B, BOGDANOVE A J, SESSA G . Understanding the functions of plant disease resistance proteins. Annual Review of Plant Biology, 2003,54:23-61.
[4] GLAZEBROOK J . Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens. Annual Review of Phytopathology, 2005,43:205-227.
[5] MA H R, WANG F, WANG W J . Alternative splicing of basic chitinase gene PR3b in the low-nicotine mutants of Nicotiana tabacum L. cv. Burley 21. Journal of Experimental Botany, 2016,67:5799-5809.
[6] RUBÉN A, TIBURCIO A F . Determination of arginine and ornithine decarboxylase activities in plants. Methods in Molecular Biology (Clifton, N.J.), 2018,1694:117-122.
[7] PATEL J, ARIYARATNE M, AHMED S, GE L, PHUNTUMART V, KALINOSKI A, MORRIS P F . Dual functioning of plant arginases provides a third route for putrescine synthesis. Plant Science, 2017,262:62-73.
[8] SHUNSUKE I, KATSUHITO H, MAKIKO N, HISAE K, YOSHIKATSU M, TAKASHI H, YOUJI S, YASUYUKI Y, KENZO N . Differential induction by methyl jasmonate of genes encoding ornithine decarboxylase and other enzymes involved in nicotine biosynthesis in tobacco cell cultures. Plant Molecular Biology, 1998,38(6):1101-1111.
[9] CHATTOPADHYAY M K, GHOSH B . Molecular analysis of polyamine biosynthesis in higher plants. Current Science, 1998,74:517-522.
[10] DALTON H L, BLOMSTEDT C K, NEALE A D, GLEADOW R, DEBOER K D, HAMILL J D . Effects of down-regulating ornithine decarboxylase upon putrescine-associated metabolism and growth in Nicotiana tabacum L. Journal of Experimental Botany, 2016,67(11):3367-3381.
[11] KAJIKAWA M, SIERRO N, HASHIMOTO T, SHOJI T . A model for evolution and regulation of nicotine biosynthesis regulon in tobacco. Plant Signaling & Behavior, 2017,12(6):e1338225.
[12] NACONSIE M, KATO K, SHOJI T . Molecular evolution of N-methylputrescine oxidase in tobacco. Plant and Cell Physiology, 2014,55:436-444.
[13] AKIRA K . Molecular biology of pyridine nucleotide and nicotine biosynthesis. Frontiers in Bioscience, 2004,9(1-3):1577-1586.
[14] RALPH E D, XIE J H . Molecular genetics of alkaloid biosynthesis in Nicotiana tabacum. Phytochemistry, 2013,94:10-27.
[15] DEBOER K, LYE J, AITKEN C, SU A, HAMILL J . The A622 gene in Nicotiana glauca (tree tobacco): Evidence for a functional role in pyridine alkaloid synthesis. Plant Molecular Biology, 2009,69(3):299-312.
[16] KAJIKAWA M, HIRAI N, HASHIMOTO T . A PIP-family protein is required for biosynthesis of tobacco alkaloids. Plant Molecular Biology, 2009,69:287-298.
[17] KAJIKAWA M, SHOJI T, KATO A . Vacuole-localized berberine bridge enzyme-like proteins are required for a late step of nicotine biosynthesis in tobacco. Plant Physiology, 2011,155:2010-2022.
[18] SHOJI T, HASHIMOTO T . Tobacco MYC2 regulates jasmonate inducible nicotine biosynthesis genes directly and by way of the NIC2 locus ERF genes. Plant & Cell Physiology, 2011,52(6):1117-1130.
[19] LEGG P D, CHAPLIN J F, COLLINS G B . Inheritance of percent total alkaloids in Nicotiana tabacum L.: Populations derived from crosses of low alkaloid lines with burley and flue-cured varieties. Journal of Heredity, 1969,60:213-217.
[20] HIBI N, HIGASHIGUCHI S, HASHIMOTO T, YAMADA Y . Gene expression in tobacco low-nicotine mutants. The Plant Cell, 1994,6(5):723-735.
[21] WASTERNACK C, SONG S . Jasmonates: Biosynthesis, metabolism, and signaling by proteins activating and repressing transcription. Journal of Experimental Botany, 2017,68(6):1303-1321.
[22] MEMELINK , JOHAN . Regulation of gene expression by jasmonate hormones. Phytochemistry, 2009,70(13):1560-1570.
[23] ZHANG H B, BOKOWIEC M T, RUSHTON P J . Tobacco transcription factors NtMYC2a and NtMYC2b form nuclear complexes with the NtJAZ1 repressor and regulate multiple jasmonate-inducible steps in nicotine biosynthesis. Molecular Plant, 2012,5(1):73-84.
[24] SHOJI T, KAJIKAWA M, HASHIMOTO T . Clustered transcription factor genes regulate nicotine biosynthesis in tobacco. The Plant Cell, 2010,22(10):3390-3409.
[25] 董娜, 张增艳, 辛志勇 . 病原诱导的小麦转录因子TaERF1b基因的分离和表达. 中国农业科学, 2008,41(4):946-953.
DONG N, ZHANG Z Y, XIN Z Y . Isolation and expression analysis of a pathogen-induced ERF gene in Triticum aestivum L. Scientia Agricultura Sinica, 2008,41(4):946-953. (in Chinese)
[26] BOER K D, TILLEMAN S, PAUWELS L . APETALA2/ETHYLENE RESPONSE FACTOR and basic helix-loop-helix tobacco transcription factors cooperatively mediate jasmonate-elicited nicotine biosynthesis. The Plant Journal: for Cell and Molecular Biology, 2011,66(6):1053-1065.
[27] GILMOUR S J, SEBOLT A M, SALAZAR M P . Overexpression of the Arabidopsis CBF3 transcriptional activator mimics multiple biochemical changes associated with cold acclimation. Plant Physiology, 2000,124(4):1854-1865.
[28] SHARABI S M, SAMACH A, PORAT R . Overexpression of the CBF2 transcriptional activator in Arabidopsis suppresses the responsiveness of leaf tissue to the stress hormone ethylene. Plant Biology, 2010,12(4):630-638.
[29] SHOJI T, HASHIMOTO T . Expression of a tobacco nicotine biosynthesis gene depends on the JRE4 transcription factor in heterogenous tomato. Journal of Plant Research, 2019,132(2):173-180.
[30] 赵云祥, 徐兆师, 陈明, 李连城, 陈耀锋, 邱志刚, 熊祥进, 马有志 . 小麦ERF类转录因子W17的结合特异性及亚细胞定位分析. 中国农业科学, 2008,41(6):1575-1582.
ZHAO Y X, XU Z S, CHEN M, LI L C, CHEN Y F, QIU Z G, XIONG X J, MA Y Z . Analysis of specific binding and subcellular localization of wheat ERF transcription factor W17. Scientia Agricultura Sinica, 2008,41(6):1575-1582. (in Chinese)
[31] ZHANG H B, ZHANG D B, CHEN J, YANG Y H, HUANG Z J, HUANG D F, WANG X C, HUANG R F . Tomato stress-responsive factor TSRF1 interacts with ethylene responsive element GCC box and regulates pathogen resistance to Ralstonia solanacearum. Plant Molecular Biology, 2004,55(6):825-834.
[32] CHAKRAVARTHY S, TUORI R P, D'ASCENZO M D, FOBERT P R, DESPRES C, MARTIN G B . The tomato transcription factor Pti4 regulates defense-related gene expression via GCC box and non-GCC box cis elements. The Plant Cell, 2003,15(12):3033-3050.
[33] SHOJI T, HASHIMOTO T . Stress-induced expression of NICOTINE2- locus genes and their homologs encoding ethylene response factor transcription factors in tobacco. Phytochemistry, 2015,113:41-49.
[34] LEGG P D, COLLINS G B, LITTON C C . Registration of La Burley 21 tobacco germplasm1 registration No. (GP 8). Crop Science, 1970,10(2):212.
[1] SHAO ShuJun,HU ZhangJian,SHI Kai. The Role and Mechanism of Linoleyl Ethanolamide in Plant Resistance Against Botrytis cinerea in Tomato [J]. Scientia Agricultura Sinica, 2022, 55(9): 1781-1789.
[2] FANG MengYing,LU Lin,WANG QingYan,DONG XueRui,YAN Peng,DONG ZhiQiang. Effects of Ethylene-Chlormequat-Potassium on Root Morphological Construction and Yield of Summer Maize with Different Nitrogen Application Rates [J]. Scientia Agricultura Sinica, 2022, 55(24): 4808-4822.
[3] YuXia WEN,Jian ZHANG,Qin WANG,Jing WANG,YueHong PEI,ShaoRui TIAN,GuangJin FAN,XiaoZhou MA,XianChao SUN. Cloning, Expression and Anti-TMV Function Analysis of Nicotiana benthamiana NbMBF1c [J]. Scientia Agricultura Sinica, 2022, 55(18): 3543-3555.
[4] LI TianCong,ZHU Hang,WEI Ning,LONG Feng,WU JianYing,ZHANG Yan,DONG JinGao,SHEN Shen,HAO ZhiMin. The Expression Pattern and Interaction Analysis of the Homologues of Splicing Factor SC35 in Setosphaeria turcica [J]. Scientia Agricultura Sinica, 2021, 54(4): 733-743.
[5] YE Di,SHI Jiang,GAO ShuangCheng,WANG ZhanYing,SHI GuoAn. Correlation Analysis of Auxin Involved in the Process of Petal Abscission of Tree Peony Luoyanghong Cut Flowers by Ethylene Promoting [J]. Scientia Agricultura Sinica, 2021, 54(23): 5097-5109.
[6] LÜ ShiKai, MA XiaoLong, ZHANG Min, DENG PingChuan, CHEN ChunHuan, ZHANG Hong, LIU XinLun, JI WanQuan. Post-transcriptional Regulation of TaNAC Genes by Alternative Splicing and MicroRNA in Common Wheat (Triticum aestivum L.) [J]. Scientia Agricultura Sinica, 2021, 54(22): 4709-4727.
[7] YUE YingXiao,HE JinGang,ZHAO JiangLi,YAN ZiRu,CHENG YuDou,WU XiaoQi,WANG YongXia,GUAN JunFeng. Comparison Analysis on Volatile Compound and Related Gene Expression in Yali Pear During Cellar and Cold Storage Condition [J]. Scientia Agricultura Sinica, 2021, 54(21): 4635-4649.
[8] CHEN Yuan,CAI He,LI Li,WANG LinJie,ZHONG Tao,ZHANG HongPing. Alternative Splicing of TNNT3 and Its Effect on the Differentiation of MuSCs in Goat [J]. Scientia Agricultura Sinica, 2021, 54(20): 4466-4477.
[9] LIU ChangYun,LI XinYu,TIAN ShaoRui,WANG Jing,PEI YueHong,MA XiaoZhou,FAN GuangJin,WANG DaiBin,SUN XianChao. Cloning, Expression and Anti-Virus Function Analysis of Solanum lycopersicum SlN-like [J]. Scientia Agricultura Sinica, 2021, 54(20): 4348-4357.
[10] ZHANG JingYun,LIU YuNuo,WANG ZhaoHao,PENG AiHong,CHEN ShanChun,HE YongRui. Analysis of Resistance Mechanism of CiNPR4 Transgenic Plants to Citrus Canker [J]. Scientia Agricultura Sinica, 2021, 54(18): 3871-3880.
[11] SHI GuoLiang,WU Qiang,YANG NianWan,HUANG Cong,LIU WanXue,QIAN WanQiang,WAN FangHao. Gene Cloning, Expression Pattern and Molecular Characterization of Chitin Deacetylase 2 in Cydia pomonella [J]. Scientia Agricultura Sinica, 2021, 54(10): 2105-2117.
[12] DU YanMin,WANG WenHui,JIA XiaoHui,TONG Wei,WANG Yang,ZHANG XinNan. The Effects of Different Oxygen Concentration on Postharvest Physiology and Storage Quality of Yali Pear [J]. Scientia Agricultura Sinica, 2020, 53(23): 4918-4928.
[13] QIN XiuJuan,QI JingJing,DOU WanFu,CHEN ShanChun,HE YongRui,LI Qiang. Identification of Rboh Family and the Response to Hormone and Citrus Bacterial Canker in Citrus [J]. Scientia Agricultura Sinica, 2020, 53(20): 4189-4203.
[14] Jian PAN,HaiFan WEN,HuanLe HE,HongLi LIAN,Gang WANG,JunSong PAN,Run CAI. Genome-Wide Identification of Cucumber ERF Gene Family and Expression Analysis in Female Bud Differentiation [J]. Scientia Agricultura Sinica, 2020, 53(1): 133-147.
[15] MA Ning,WANG ChaoFan,FANG DongLu,DING MengTing,YAO JiaLei,YANG WenJian,HU QiuHui. Flavor Variation of Flammulina velutipes in Polyethylene Film Packaging During the Cold Storage [J]. Scientia Agricultura Sinica, 2019, 52(8): 1435-1448.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!