Abid M A, Wei Y, Meng Z, Wang Y, Ye Y, Wang Y, He H, Zhou Q, Li Y, Wang P, Li X, Yan L, Malik W, Guo S, Chu C, Zhang R, Liang C. 2022. Increasing floral visitation and hybrid seed production mediated by beauty mark in Gossypium hirsutum. Plant Biotechnology Journal, 20, 1274–1284.
Alabadi D, Gil J, Blazquez M A, Garcia-Martinez J L. 2004. Gibberellins repress photomorphogenesis in darkness. Plant Physiology, 134, 1050–1057.
An J P, Wang X F, Espley R V, Lin-Wang K, Bi S Q, You C X, Hao Y J. 2020. An apple B-box protein MdBBX37 modulates anthocyanin biosynthesis and hypocotyl elongation synergistically with MdMYBs and MdHY5. Plant and Cell Physiology, 61, 130–143.
Bai S, Saito T, Honda C, Hatsuyama Y, Ito A, Moriguchi T. 2014. An apple B-box protein, MdCOL11, is involved in UV-B- and temperature-induced anthocyanin biosynthesis. Planta, 240, 1051–1062.
Barnes J S, Nguyen H P, Shen S, Schug K A. 2009. General method for extraction of blueberry anthocyanins and identification using high performance liquid chromatography-electrospray ionization-ion trap-time of flight-mass spectrometry. Journal of Chromatography A, 1216, 4728–4735.
Bursch K, Niemann E T, Nelson D C, Johansson H. 2021. Karrikins control seedling photomorphogenesis and anthocyanin biosynthesis through a HY5-BBX transcriptional module. Plant Journal, 107, 1346–1362.
Bursch K, Toledo-Ortiz G, Pireyre M, Lohr M, Braatz C, Johansson H. 2020. Identification of BBX proteins as rate-limiting cofactors of HY5. Nature Plants, 6, 921–928.
Chatterjee M, Sharma P, Khurana J P. 2006. Cryptochrome 1
from Brassica napus is up-regulated by blue light and controls hypocotyl/stem growth and anthocyanin accumulation. Plant Physiology, 141, 61–74.
Crocco C D, Locascio A, Escudero C M, Alabadi D, Blazquez M A, Botto J F. 2015. The transcriptional regulator BBX24 impairs DELLA activity to promote shade avoidance in Arabidopsis thaliana. Nature Communications, 6, 6202.
Daviere J M, Wild M, Regnault T, Baumberger N, Eisler H, Genschik P, Achard P. 2014. Class I TCP-DELLA interactions in inflorescence shoot apex determine plant height. Current Biology, 24, 1923–1928.
Deng T, Wu D, Duan C, Yan X, Du Y, Zou J, Guan Y. 2017. Spatial profiling of gibberellins in a single leaf based on microscale matrix solid-phase dispersion and precolumn derivatization coupled with ultraperformance liquid chromatography-tandem mass spectrometry. Analytical Chemistry, 89, 9537–9543.
Feng S, Martinez C, Gusmaroli G, Wang Y, Zhou J, Wang F, Chen L, Yu L, Iglesias-Pedraz J M, Kircher S, Schafer E, Fu X, Fan L M, Deng X W. 2008. Coordinated regulation of Arabidopsis thaliana development by light and gibberellins. Nature, 451, 475–479.
Gangappa S N, Botto J F. 2014. The BBX family of plant transcription factors. Trends in Plant Science, 19, 460–470.
Gangappa S N, Botto J F. 2016. The multifaceted roles of HY5 in plant growth and development. Molecular Plant, 9, 1353–1365.
Guo Z, Wang H, Tao J, Ren Y, Xu C, Wu K, Zou C, Zhang J, Xu Y. 2019. Development of multiple SNP marker panels affordable to breeders through genotyping by target sequencing (GBTS) in maize. Molecular Breeding, 39, 1–12.
Indorf M, Cordero J, Neuhaus G, Rodriguez-Franco M. 2007. Salt tolerance (STO), a stress-related protein, has a major role in light signalling. Plant Journal, 51, 563–574.
Ji G, Liang C, Cai Y, Pan Z, Meng Z, Li Y, Jia Y, Miao Y, Pei X, Gong W, Wang X, Gao Q, Peng Z, Wang L, Sun J, Geng X, Wang P, Chen B, Wang P, Zhu T, et al. 2021. A copy number variant at the HPDA-D12 locus confers compact plant architecture in cotton. New Phytologist, 229, 2091–2103.
Job N, Yadukrishnan P, Bursch K, Datta S, Johansson H. 2018. Two B-Box proteins regulate photomorphogenesis by oppositely modulating HY5 through their diverse C-terminal domains. Plant Physiology, 176, 2963–2976.
Lee J, He K, Stolc V, Lee H, Figueroa P, Gao Y, Tongprasit W, Zhao H, Lee I, Deng X W. 2007. Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. Plant Cell, 19, 731–749.
Li C, Pei J, Yan X, Cui X, Tsuruta M, Liu Y, Lian C. 2021. A poplar B-box protein PtrBBX23 modulates the accumulation of anthocyanins and proanthocyanidins in response to high light. Plant Cell and Environment, 44, 3015–3033.
Li L, Zhang C, Huang J, Liu Q, Wei H, Wang H, Liu G, Gu L, Yu S. 2021. Genomic analyses reveal the genetic basis of early maturity and identification of loci and candidate genes in upland cotton (Gossypium hirsutum L.). Plant Biotechnology Journal, 19, 109–123.
Li Q F, Wang C, Jiang L, Li S, Sun S S, He J X. 2012. An interaction between BZR1 and DELLAs mediates direct signaling crosstalk between brassinosteroids and gibberellins in Arabidopsis. Science Signaling, 5, ra72.
Li X, Ouyang X, Zhang Z, He L, Wang Y, Li Y, Zhao J, Chen Z, Wang C, Ding L, Pei Y, Xiao Y. 2019. Over-expression of the red plant gene R1 enhances anthocyanin production and resistance to bollworm and spider mite in cotton. Molecular Genetics and Genomics, 294, 469–478.
Li Y, Xu P, Chen G, Wu J, Liu Z, Lian H. 2020. FvbHLH9 functions as a positive regulator of anthocyanin biosynthesis by forming a HY5-bHLH9 transcription complex in strawberry fruits. Plant and Cell Physiology, 61, 826–837.
Liang A, Zhao J, Li X, Yan F, Chen Z, Chen X, Wang Y, Li Y, Wang C, Xiao Y. 2020. Up-regulation of GhPAP1A results in moderate anthocyanin accumulation and pigmentation in sub-red cotton. Molecular Genetics and Genomics, 295, 1393–1400.
Liu K, Li Y, Chen X, Li L, Liu K, Zhao H, Wang Y, Han S. 2018. ERF72 interacts with ARF6 and BZR1 to regulate hypocotyl elongation in Arabidopsis. Journal of Experimental Botany, 69, 3933–3947.
Livak K J, Schmittgen T D. 2001. Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCt method. Methods, 25, 402–408.
de Lucas M, Daviere J M, Rodriguez-Falcon M, Pontin M, Iglesias-Pedraz J M, Lorrain S, Fankhauser C, Blazquez M A, Titarenko E, Prat S. 2008. A molecular framework for light and gibberellin control of cell elongation. Nature, 451, 480–484.
Luo D, Xiong C, Lin A, Zhang C, Sun W, Zhang J, Yang C, Lu Y, Li H, Ye Z, He P, Wang T. 2021. SlBBX20 interacts with the COP9 signalosome subunit SlCSN5-2 to regulate anthocyanin biosynthesis by activating SlDFR expression in tomato. Horticulture Research, 8, 163.
Ma J, Pei W, Ma Q, Geng Y, Liu G, Liu J, Cui Y, Zhang X, Wu M, Li X, Li D, Zang X, Song J, Tang S, Zhang J, Yu S, Yu J. 2019. QTL analysis and candidate gene identification for plant height in cotton based on an interspecific backcross inbred line population of Gossypium hirsutum×Gossypium barbadense. Theoretical and Applied Genetics, 132, 2663–2676.
McMichael S C. 1942. Occurrence of the dwarf-red character in upland cotton. Journal of Agricultural Research, 64, 477–481.
Oh E, Zhu J Y, Bai M Y, Arenhart R A, Sun Y, Wang Z Y. 2014. Cell elongation is regulated through a central circuit of interacting transcription factors in the Arabidopsis hypocotyl. eLife, 3, e03031.
Ou C, Zhang X, Wang F, Zhang L, Zhang Y, Fang M, Wang J, Wang J, Jiang S, Zhang Z. 2020. A 14 nucleotide deletion mutation in the coding region of the PpBBX24 gene is associated with the red skin of “Zaosu Red” pear (Pyrus pyrifolia White Pear Group): A deletion in the PpBBX24 gene is associated with the red skin of pear. Horticulture Research, 7, 39.
Pearce S, Saville R, Vaughan S P, Chandler P M, Wilhelm E P, Sparks C A, Al-Kaff N, Korolev A, Boulton M I, Phillips A L, Hedden P, Nicholson P, Thomas S G. 2011. Molecular characterization of Rht-1 dwarfing genes in hexaploid wheat. Plant Physiology, 157, 1820–1831.
He P, Zhang H Z, Zhang L, Jiang B, Xiao G H, Yu J N. 2022. The GhMAX2 gene regulates plant growth and fiber development in cotton. Journal of Integrative Agriculture, 21, 1563–1575.
Shao D, Zhu Q H, Liang Q, Wang X, Li Y, Sun Y, Zhang X, Liu F, Xue F, Sun J. 2022. Transcriptome analysis reveals differences in anthocyanin accumulation in cotton (Gossypium hirsutum L.) induced by red and blue light. Frontiers in Plant Science, 13, 788828.
Sharma P, Chatterjee M, Burman N, Khurana J P. 2014. Cryptochrome 1 regulates growth and development in Brassica through alteration in the expression of genes involved in light, phytohormone and stress signalling. Plant Cell and Environment, 37, 961–977.
Shin D H, Choi M, Kim K, Bang G, Cho M, Choi S B, Choi G, Park Y I. 2013. HY5 regulates anthocyanin biosynthesis by inducing the transcriptional activation of the MYB75/PAP1 transcription factor in Arabidopsis. FEBS Letters, 587, 1543–1547.
Spielmeyer W, Ellis M H, Chandler P M. 2002. Semidwarf (sd-1), “green revolution” rice, contains a defective gibberellin 20-oxidase gene. Proceedings of the National Academy of Sciences of the United States of America, 99, 9043–9048.
Takuno S, Innan H, Cano L M, Kamoun S, Terauchi R. 2013. QTL-seq: Rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations. Plant Journal, 74, 174–183.
Van De Velde K, Thomas S G, Heyse F, Kaspar R, Van Der Straeten D, Rohde A. 2021. N-terminal truncated RHT-1 proteins generated by translational reinitiation cause semi-dwarfing of wheat green revolution alleles. Molecular Plant, 14, 679–687.
Wang Y, Zhang X, Zhao Y, Yang J, He Y, Li G, Ma W, Huang X, Su J. 2020. Transcription factor PyHY5 binds to the promoters of PyWD40 and PyMYB10 and regulates its expression in red pear ‘Yunhongli No. 1’. Plant Physiology and Biochemistry, 154, 665–674.
Weller J L, Hecht V, Vander Schoor J K, Davidson S E, Ross J J. 2009. Light regulation of gibberellin biosynthesis in pea is mediated through the COP1/HY5 pathway. Plant Cell, 21, 800–813.
Wu H, Ren Z, Zheng L, Guo M, Yang J, Hou L, Qanmber G, Li F, Yang Z. 2021. The bHLH transcription factor GhPAS1 mediates BR signaling to regulate plant development and architecture in cotton. Crop Journal, 9, 1049–1059.
Xu D. 2020. COP1 and BBXs-HY5-mediated light signal transduction in plants. New Phytologist, 228, 1748–1753.
Xu D, Jiang Y, Li J, Holm M, Deng X W. 2018. The B-Box domain protein BBX21 promotes photomorphogenesis. Plant Physiology, 176, 2365–2375.
Yadukrishnan P, Job N, Johansson H, Datta S. 2018. Opposite roles of group IV BBX proteins: Exploring missing links between structural and functional diversity. Plant Signaling & Behavior, 13, e1462641.
Yang Z, Zhang C, Yang X, Liu K, Wu Z, Zhang X, Zheng W, Xun Q, Liu C, Lu L. 2014. PAG1, a cotton brassinosteroid catabolism gene, modulates fiber elongation. New Phytologist, 203, 437–448.
Zhao L, Di J, Guo Q, Zhao J, Zhou X, Chen X. 2017. The differentially expressed genes identification in dwarf mutant of Gossypium hirsutum by RNA-Seq approach. Agri Gene, 5, 37–44.
Zhao X, Heng Y, Wang X, Deng X W, Xu D. 2020. A positive feedback loop of BBX11-BBX21-HY5 promotes photomorphogenic development in Arabidopsis. Plant Communications, 1, 100045.
Zhang J, Zhang Y, Xing J, Yu H, Zhang R, Chen Y, Zhang D, Yin P, Tian X, Wang Q, Duan L, Zhang M, Peters R, Li Z. 2020. Introducing selective agrochemical manipulation of gibberellin metabolism into a cereal crop. Nature Plants, 6, 67–72.
Zhang X, Rui Q Z, Li Y, Chen Y, Chen Y, Zhang X L, Chen D H, Song M Z. 2020. Architecture of stem and branch affects yield formation in short season cotton. Journal of Integrative Agriculture, 19, 680–689.
Zhou H, Yang M, Zhao L, Zhu Z, Liu F, Sun H, Sun C, Tan L. 2021. HIGH-TILLERING AND DWARF 12 modulates photosynthesis and plant architecture by affecting carotenoid biosynthesis in rice. Journal of Experimental Botany, 72, 1212–1224.
Zou Z, Wang R, Wang R, Yang S, Yang Y. 2017. Genome-wide identification, phylogenetic analysis, and expression profiling of the BBX family genes in pear. Journal of Horticultural Science & Biotechnology, 93, 37–50.
|