Scientia Agricultura Sinica ›› 2025, Vol. 58 ›› Issue (17): 3434-3450.doi: 10.3864/j.issn.0578-1752.2025.17.006

• PLANT PROTECTION • Previous Articles     Next Articles

Identification and Evaluation of Biocontrol Actinomycetes Against Xanthomonas oryzae pv. oryzicola for Disease Suppression and Growth Promotion in Rice

HU JiaYan(), SHEN ZhiHan, WEN LiHui, YU JiaHao, ZHANG YuJun, JIANG DongHua*()   

  1. College of Life Sciences, Zhejiang Normal University, Jinhua 321004, Zhejiang
  • Received:2025-05-26 Accepted:2025-07-07 Online:2025-09-02 Published:2025-09-02
  • Contact: JIANG DongHua

Abstract:

【Objective】Rice bacterial leaf streak (BLS) is a quarantine-regulated bacterial disease in China caused by Xanthomonas oryzae pv. oryzicola (Xoc), which has severely threatened rice yield and grain quality, becoming one of the main diseases in rice production areas. This study aims to utilize high-quality actinomycete strains to lay a theoretical foundation for developing the products of microbial origin to mitigate crop diseases.【Method】Actinomycete strains were isolated and purified from rhizosphere soil samples of various plants using the serial dilution plating technique. The inhibition ability of different strains against Xoc was compared by measuring the diameter of the inhibition zone. The target strain with the best inhibition effect was selected for preservation and identified through polyphasic characterization integrating morphological traits, physiological-biochemical experiments, and multi-gene alignment analysis. The effects of antagonistic actinomycete on the physiological characteristics of Xoc were investigated by scanning electron microscopy, Fourier-transform infrared spectroscopy (FTIR), intracellular β-galactosidase leakage determination and SDS-PAGE gel electrophoresis. The greenhouse pot control effect test was carried out to study the actual benefit of controlling BLS. The growth-promoting characteristics of antagonistic actinomycete were analyzed by designated medium, and its effects on the growth and development of rice seedlings were investigated by watering growth-promoting experiments.【Result】A total of 80 actinomycete strains were isolated. Among them, strain Sv-6 exhibited the most potent antagonism against Xoc, with inhibition zone diameter of (44.87±0.26) mm. Based on the morphological characteristics and phylogenetic analysis, strain Sv-6 was identified as Streptomyces virginiae. After treatment with the culture filtrate of Sv-6 strain, Xoc cells swelled, shrunk and aggregated. At the same time, the material composition of the membrane surface changed, the permeability increased, and the protein expression decreased. The results of greenhouse pot experiments showed that the lesion inhibition rates of susceptible rice varieties Yongyou 15 and Xiangliangyou 900 were 57.98%-88.25% after being treated with strain Sv-6 culture fluid, which exhibited a good preventive effect on rice infected with Xoc. The growth-promoting characterization confirmed that strain Sv-6 exhibited siderophore production, inorganic phosphate solubilization, and IAA production. The growth-promoting irrigation experiments confirmed that strain Sv-6 enhanced the growth of rice seedlings, and the root length increased by 48.50% after treatment.【Conclusion】S. virginiae Sv-6 exhibits a good control effect on BLS, and has the potential to be developed into green biocontrol agent and microbial fertilizer.

Key words: rice bacterial leaf streak (BLS), Xanthomonas oryzae pv. oryzicola (Xoc), Streptomyces virginiae, biological control, growth-promoting evaluation

Table 1

Primers used for amplifying recA, rpoB, gyrB and 16S rRNA housekeeping genes"

引物名称Primer name 序列Sequence (5′→3′)
recA-F ATGGCAGGAACCGACCGCGAGAAGG
recA-R TCAGCTCTTGGCCGCCGCGGCCTTG
rpoB-F TTGGCCGCCTCGCGCAATGCCTCGA
rpoB-R TCAGACCTCTTCGACGCTGCTCGGC
gyrB-F GTGGCCGATTCCGGCAACCCCAACG
gyrB-R TCAGATGTCGAGGAAGCGGACGTCC
16S rRNA-27F AGTTTGATCCTGGCTCAG
16S rRNA-1492R TACGGTTACCTTGTTACGACTT

Fig. 1

The colony morphology of different actinomycetes and their inhibitory zones against Xoc"

Fig. 2

Inhibitory zone of strain Sv-6 against Xoc"

Fig. 3

Colony characteristics and microstructure structure of strain Sv-6"

Fig. 4

Growth of strain Sv-6 on different differential media"

Table 2

Culture characteristics of strain Sv-6 on different differential media"

鉴别培养基
Differential medium
基内菌丝
Substrate mycelium
气生菌丝
Aerial mycelium
可溶性色素
Water-soluble pigment
菌落生长
Colony growth
察氏Czapek Dox 白色White 淡粉色Light pink 无None 稀疏Sparse
ISP1 淡黄色Faint yellow 白色White 无None 旺盛Lush
ISP2 橘黄色Croci 白色White 无None 旺盛Lush
ISP5 透明Transparente 淡粉色Light pink 无None 稀疏Sparse

Table 3

Test results of carbon/nitrogen source utilization of strain Sv-6"

碳源种类Type of carbon sources 试验结果Test result 氮源种类Type of nitrogen sources 试验结果Test result
蔗糖Sucrose + KNO3 +
葡萄糖Glucose + L-天冬酰胺L-asparagine +
山梨醇Sorbitol + γ-氨基丁酸γ-aminobutyric acid +
α-乳糖α-lactose + L-酪氨酸L-tyrosine +
甘露醇Mannitol + DL-色氨酸DL-tryptophan +
D(+)-木糖D(+)-xylose - (NH4)2SO4 -
D-木糖D-xylose - NH4Cl -
+:阳性Positive;-:阴性Negative

Fig. 5

Physiological and biochemical test results of strain Sv-6"

Fig. 6

Multi-gene phylogenetic tree of strain Sv-6 constructed based on 16S rRNA, recA, rpoB and gyrB sequences"

Fig. 7

SEM results of Xoc cell morphology treated with strain Sv-6 culture filtrate at different concentrations"

Table 4

Changes in vibrational peaks of Xoc cell after treated with different concentrations of strain Sv-6 culture filtrate"

振动峰分配
Vibrational peak assignment
分类
Classification
振动峰<BOLD>V</BOLD>ibrational peak (cm-1)
CK 1/2 1
碳水化合物中的C-O、C-C str、C-O-H、C-O-C伸缩振动峰
C-O, C-C str, C-O-H, C-O-C def of carbohydrates
糖原和核酸
Glycogen and nucleic acids
1064.15 1064.51 1058.73
磷酸二酯>PO2中P=O的不对称伸缩振动峰
P=O stretching (antisymmetric) of >PO2
主要是核酸
Mainly nucleic acids
1226.02 1229.78 1227.47
COO-中C=O对称伸缩振动峰
C=O str (sym) of COO-
氨基酸侧链和脂肪酸
Amino acid side chains, fatty acids
1385.60 1388.50 1384.64
酰胺II中蛋白质N-H弯曲振动峰和C-N拉伸振动峰
Amide II (protein N-H bend, C-N stretch)
α螺旋α helices 1525.90 1529.27 1527.83
酰胺I的β-折叠结构β-pleated sheet structures of amide I β-折叠β-pleated sheet 1635.82 1638.23 1637.75
>CH2中C-H不对称伸缩振动峰C-H str (asym) of >CH2 主要是脂类Mainly lipids 2921.15 2919.22 2928.86
羟基O-H伸缩振动峰O-H str of hydroxyl groups 多糖和蛋白质Polysaccharides, proteins 3284.66 3280.81 3288.04

Fig. 8

Infrared absorption spectra of Xoc cell after treated with different concentrations of strain Sv-6 culture filtrate"

Fig. 9

Changes in β-galactosidase leakage of Xoc after treated with different concentrations of strain Sv-6 culture filtrate"

Fig. 10

Results of SDS-PAGE protein electrophoresis of Xoc treated with strain Sv-6 culture filtrate"

Fig. 11

Lesion inhibition rate and control effect of strain Sv-6 against rice bacterial leaf streak"

Fig. 12

Growth promotion characteristics of strain Sv-6"

Fig. 13

Effects of strain Sv-6 culture fluid on the growth indices of rice seedlings"

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