Scientia Agricultura Sinica ›› 2010, Vol. 43 ›› Issue (18): 3713-3723 .doi: 10.3864/j.issn.0578-1752.2010.18.004

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Chromosome Mapping and Expression Analysis After the Cloning of Defender Against Apoptotic Cell Death Gene from Gossypium hirsutum

GONG Wen-fang, YU Shu-xun, SONG Mei-zhen, FAN Shu-li, PANG Chao-you, XIAO Shui-ping
  

  1. (中国农业科学院棉花研究所/农业部棉花遗传改良重点实验室)
  • Received:2010-03-17 Revised:2010-05-10 Online:2010-09-15 Published:2010-09-15
  • Contact: YU Shu-xun

Abstract:

【Objective】 Cloning a defender against apoptotic cell death gene, GhDAD1, and analyzing its expression model could provide a theoretical foundation for both molecular mechanism research of apoptosis and breeding senescence-resistant varieties in shorted-season Gossypium hirsutum. 【Method】 RT-PCR and in silico cloning were used to amplify DNA sequence and full-length cDNA sequence of GhDAD1 in Gossypium hirsutum. Bioinformatics characterization of GhDAD1 had also been analyzed through all kinds of software. FISH was used to get the location of GhDAD1 on chromosomes. Both the expression patterns of GhDAD1 under the nature decrepitude and treatment of 6-BA, ethylene, H2O2, SA, NO were analyzed by real-time PCR. 【Result】 The length of GhDAD1 sequence is 866 bp, including a 354 bp ORF, 232 bp 5′-UTR, 280 bp 3′-UTR, five extrons and 4 introns. It was in conformity with the principles of Kozark and GT-AG. Homology analysis showed that the GhDAD1 was highly homologous to other DAD1 from different species, especially from Populus davidiana, Citrus unshiu (91%) and Arabidopsis thaliana (88%) other than barley and rice. GhDAD1 protein had 112 amino acids, and its pI was 8.32. The GhDAD1 gene was located on the long arm of the chromosomes. Real-time PCR showed that GhDAD1 gene expressed in all issues of Gossypium hirsutum, with flower and embryo having high expressing level. And the expressing level was on the decline with the processing of decrepitude. The CCRI10 was cultured by addition of 6-BA, ethylene, SA, NO, and H2O2. At the same time, chlorophyll was measured. The result of qRT-PCR showed that 6-BA and SA could retard the senescence, and the transcript of GhDAD1 was higher. The ethylene could accelerate the senescence, so the transcript of GhDAD1 was lower. The influence of H2O2 was not apparent. With the increasing of NO concentration, the expression level of GhDAD1 increased to a peak then decreased. 【Conclusion】 There seemed to be a gene about the defender against apoptotic cell death 1 in Gossypium hirsutum.

Key words: Gossypium hirsutum, defender against apoptotic cell death factor, bioinformatics, expression model

[1] JIANG Feng, WU ChunYan, WANG YiHao, YANG ZeZhong, GONG Cheng, LUO Chen. Identification and Expression Analysis of the Fatty Acid Elongase Gene Family in Bemisia tabaci MED [J]. Scientia Agricultura Sinica, 2026, 59(4): 793-806.
[2] ZHANG TianYu, LI Bai, ZANG JinPing, CAO HongZhe, DONG JinGao, XING JiHong, ZHANG Kang. Genome-Wide Identification and Expression Analysis of HMG Family Genes in Botrytis cinerea [J]. Scientia Agricultura Sinica, 2025, 58(4): 704-718.
[3] YI ZeHui, WANG Ying, SONG HuiXia, ZHAO Jing, MAO LiPing. Genome-Wide Identification and Expression Analysis of Peroxiredoxins Gene Family in Asparagus officinalis [J]. Scientia Agricultura Sinica, 2025, 58(18): 3728-3743.
[4] WANG Wei, WU ChuanLei, HU XiaoYu, LI JiaJia, BAI PengYu, WANG GuoJi, MIAO Long, WANG XiaoBo. Genome-Wide Identification of Soybean LOX Gene Family and the Effect of GmLOX15A1 Gene Allele on 100-Seed Weight [J]. Scientia Agricultura Sinica, 2025, 58(1): 10-29.
[5] SUN SiSi, MA Wu, SI HuiRu, WANG XianZhong, LIU Qiang, LUO YanLin, CHEN XiaoYuLong, TANG Bin. AQPs Characteristics of Megoura crassicauda and Their Expression Changes in Response to High Relative Humidity Stress [J]. Scientia Agricultura Sinica, 2024, 57(20): 4057-4070.
[6] PAN FengYing, QU JunJie, LIU LuLu, SUN DaYun, GUO ZeXi, WEI XiaoLi, WEI ShuMei, YIN Ling. Expression and Functional Analysis of Glycosyl Hydrolase Genes from Plasmopara viticola [J]. Scientia Agricultura Sinica, 2023, 56(5): 879-891.
[7] ZHANG KaiJing, HE ShuaiShuai, JIA Li, HU YuChao, YANG DeKun, LU XiaoMin, ZHANG QiAn, YAN CongSheng. Genome-Wide Identification and Expression Analysis of DIR Gene Family in Cucumber [J]. Scientia Agricultura Sinica, 2023, 56(4): 711-728.
[8] DANG YuanYue, MA JianJiang, YANG ShuXian, SONG JiKun, JIA Bing, FENG Pan, CHEN QuanJia, YU JiWen. Genome-Wide Identification and Expression Analysis of β-tubulin Family in Cotton Fiber Development [J]. Scientia Agricultura Sinica, 2023, 56(23): 4585-4601.
[9] DONG YanYu, XU BiYu, DONG ZeYu, WANG LuYao, CHEN JinWen, FANG Lei. Genome-Wide Identification and Interspecific Comparative Analysis of the EXO70 Gene Family in Cotton [J]. Scientia Agricultura Sinica, 2023, 56(23): 4621-4634.
[10] KAYOUMU MiReZhaTiJiang, WUMAIERJIANG XiErAiLi, LI XiaoTong, WANG XiangRu, GUI HuiPing, ZHANG HengHeng, ZHANG XiLing, DONG Qiang, SONG MeiZhen. Screening of Low Phosphorus Tolerant Germplasm in Cotton at Seedling Stage and Comprehensive Evaluation of Low Phosphorus Tolerance [J]. Scientia Agricultura Sinica, 2023, 56(21): 4150-4162.
[11] HAN XiaoWen, HAN Shuo, HU YiFeng, WANG MengRu, CHEN ZhongYi, ZHU YongXing, YIN JunLiang. Genome-Wide Identification of AP2/ERF Gene Family in Alternanthera philoxeroides and Its Expression Patterns Under Herbicide Stresses [J]. Scientia Agricultura Sinica, 2023, 56(20): 4021-4034.
[12] DING GuoHua, XIAO GuangHui, ZHU LiPing. Genome-Wide Identification and Expression Analysis of NLP (NIN- Like Protein) Transcription Factor Gene Family in Cotton [J]. Scientia Agricultura Sinica, 2023, 56(19): 3723-3746.
[13] ZHANG Xin, YANG XingYu, ZHANG ChaoRan, ZHANG Chong, ZHENG HaiXia, ZHANG XianHong. Identification and Expression Analysis of Heat Shock Protein Superfamily Genes in Callosobruchus chinensis [J]. Scientia Agricultura Sinica, 2023, 56(19): 3814-3828.
[14] YANG HuiZhen, YANG Huan, WU ZiXuan, FAN KuoHai, YIN Wei, SUN PanPan, ZHONG Jia, SUN Na, LI HongQuan. Prokaryotic Expression and Metal Binding Characterization of Metallothionein 1A and 2A of Sus scrofa [J]. Scientia Agricultura Sinica, 2023, 56(17): 3461-3478.
[15] MA YanBin, LI HuanLi, WEN Jin, ZHOU XianTing, QIN Xin, WANG Xia, WANG XinSheng, LI YanE. Identification of Molecular Characterizations for Transgenic Cotton R1-3 Line of Glyphosate Tolerance [J]. Scientia Agricultura Sinica, 2023, 56(17): 3277-3284.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!