Scientia Agricultura Sinica ›› 2016, Vol. 49 ›› Issue (23): 4544-4554.doi: 10.3864/j.issn.0578-1752.2016.23.007

• PLANT PROTECTION • Previous Articles     Next Articles

Cloning and Expression Analysis of Cytochrome C Oxidase Subunit Ⅲ from Sitophilus zeamais

HOU Chang-liang1, WANG Jing-bo1, LI Yong-qiang1,2, WU Hua1,2, MA Zhi-qing1,2FENG Jun-tao1,2, ZHANG Xing1,2

 
  

  1. 1Research & Development Center of Bioration Pesticide, Northwest A&F University, Yangling 712100, Shaanxi
    2Research Center of Biopesticide Technology & Engineering, Yangling 712100, Shaanxi
  • Received:2016-08-01 Online:2016-12-01 Published:2016-12-01

Abstract: 【Objective】The objective of this study is to clone full-length cDNA of cytochrome C oxidase subunit Ⅲ (COXⅢ), which is a possible action site of allyl isothiocyanate (AITC), then analyze the sequence and prokaryotic expression.【Method】Firstly, finding the known part of the gene of COXⅢ in the NCBI, the full sequence of Sitophilus zeamais COXⅢ was cloned by RT-PCR and RACE techniques. The sequences of COXⅢ, phylogenetic relationship and properties of S. zeamais COXⅢ, the three-dimensional structure were analyzed by a variety of bioinformatics softwares such as DNAMAN8.0, MEGA5.1, GENEDOC, ProtParam and TargetP 1.1 Server et al. Using pEASY-Blunt E1, pET28a, pET30a, PET32a and pET42a as a fused expression vector, a recombinant plasmid pEASY-Blunt E1-COXⅢ, pET-28a-COXⅢ, pET30a-COXⅢ, pET32a-COXⅢ, pET42a-COXⅢ were constructed. Then inducing its expression in Escherichia coli BL21 (DE3) with IPTG at different concentrations, times and temperatures. SDS-PAGE was used to detect the fusion protein expression and the protein expression was verified by Western blot.【Result】The full-length sequences of COXⅢ from S. zeamais was obtained, and its ORF is 792 bp encoding 263 amino acid residues, the predicted molecular weight is 30 938.1 Da, isoelectric point pI is 6.51, the prediction formula is C1492H2154N338O362S10, the unstable factor is 34.49, and the total average hydrophilic coefficient is 0.492. It is a stable hydrophobic protein. Phylogenetic tree showed that S. zeamais had the closest evolutionary relationship with S. oryzae at the amino acid level. Prokaryotic expression results showed that efficient expression of COXⅢ protein could be realized after induced with 1 mmol·L-1 IPTG in E. coil BL21 (DE3) for 24 h at 18℃. Solubility analysis showed that the fused protein mainly existed as inclusion bodies. Western blot confirmed that the molecular weight of the recombinant COXⅢ is about 62 kD, consistent with the predicted result.【Conclusion】The full-length sequences of COXⅢ from S. zeamais was successfully obtained, and the prokaryotic expression of its encoding protein was achieved, which will lay a foundation for further function research of S. zeamais COXⅢ, and provide a theoretical basis for the research of the mechanism of the action on controlling S. zeamais by using isothiocyanates compound.

Key words: Sitophilus zeamais, cytochrome C oxidase subunit Ⅲ, RACE technique, bioinformatics analysis, prokaryotic expression

[1]    Howe R W. Losses caused by insects and mites in stored foods and feeding stuffs. Nutrition Abstracts and Reviews, 1965, 35: 285-303.
[2]    唐川江. 防治仓储害虫的植物筛选及活性成分研究[D]. 成都: 四川大学, 2002.
Tang C J.The studies on the screening of plant controlling stored grain pest and the bioactivity of substance killing stored grain pest[D]. Chengdu: Sichuan University, 2002. (in Chinese)
[3]    Taylor R W D. Resistance to grain fumigants and future prospects for their use. Pesticide Outlook, 1991, 2(2): 22-24.
[4]    Tyler P S, Taylor R W, Rees D P. Insect resistance to phosphine fumigation in food warehouses in Bangladesh. International Pest Control, 1983, 25(1): 10-13.
[5]    Hargreaves B A, Gold G E, BeauLieu C F, Vasanawala S S, Nishimura D G, PauLy J M. Comparison of new sequences for high-resolution cartilage imaging. Magnetic Resonance in Medicine, 2003, 49(4): 700-709.
[6]    Kornaat P R,  Doornbos J, van der Molen A J, Kloppenburg M, Nelissen R G, Hogendoorn P C, Bloem J L. Magnetic resonance imaging of knee cartilage using a water selective balanced steady-state free precession sequence. Journal of Magnetic Resonance Imaging, 2004, 20(5): 850-856.
[7]    Ferguson-Miller S, Babcock G T. Heme/copper terminal oxidases. Chemical Reviews, 1996, 96(7): 2889-2908.
[8]    Calhoun M W, Thomas J W, Gennis R B. The cytochrome oxidase superfamily of redox-driven proton pumps. Trends in Biochemical Sciences, 1994, 19(8): 325-330.
[9]    Ostermeier C, Iwata S, Michel H. Cytochrome c oxidase. Current Opinion in Structural Biology, 1996, 6(4): 460-466.
[10]   Michel H, Behr J, Harrenga A, Kannt A. Cytochrome c oxidase: structure and spectroscopy. Annual Review of Biophysics and Biomolecular structure, 1998, 27(1): 329-356.
[11]   Kashi K P, Chefurka W. The effect of phosphine on the absorption and circular dichroic spectra of cytochrome c and cytochrome oxidase. Pesticide Biochemistry and Physiology, 1976, 6(4): 350-362.
[12]   Nakakita H, Katsumata Y, Ozawa T. The effect of phosphine on respiration of rat liver mitochondria. Journal of biochemistry, 1971, 69(3): 589-593.
[13]   Nath N S, Bhattacharya I, Tuck A G, Schlipalius D I, Ebert P R. Mechanisms of phosphine toxicity. Journal of Toxicology, 2011, 2011(3): Article ID 494168.
[14]   Mansour E E, Mi F, Zhang G, Jiugao X, Wang Y, Kargbo A. Effect of allylisothiocyanate on Sitophilus oryzae, Tribolium confusum and Plodia interpunctella: Toxicity and effect on insect mitochondria. Crop Protection, 2012, 33: 40-51.
[15]   Mi L, Hood B L, Stewart N A, Xiao Z, Govind S, Wang X, Conrads T P, Veenstra T D, Chung F L. Identification of potential protein targets of isothiocyanates by proteomics. Chemical Research in Toxicology, 2011, 24(10): 1735-1743.
[16]   Wu H, Liu X, Yu D, Zhang X, Feng J. Effect of allyl isothiocyanate on ultra-structure and the activities of four enzymes in adult Sitophilus zeamais. Pesticide Biochemistry and Physiology, 2014, 109: 12-17.
[17]   Zhang C, Wu H, Zhao Y, Zhao Y, Ma Z Q, Zhang X. Comparative studies on mitochondrial electron transport chain complexes of Sitophilus zeamais treated with allyl isothiocyanate and calcium phosphide. Pesticide Biochemistry and Physiology, 2016, 126: 70-75.
[18]   宋爱新. 细胞色素c氧化酶亚基Ⅱ可溶性结构域的结构改变、转换和功能研究[D]. 上海: 复旦大学, 2002.
Song A X. Structural changes, transformation and functional studies on the subunitⅡsoluble domains of cytochrome c oxidase[D]. Shanghai: Fudan University, 2002. (in Chinese)
[19]   施大卫, 王利, 娄绘芳, 黄艳青, 朱保建, 吴信忠. 青石斑鱼细胞色素C氧化酶亚基Ⅰ(COX)基因的克隆鉴定及表达分析. 中国水产科学, 2009, 16(4): 467-476.
Shi D W, Wang L, Lou H F, Huang Y Q, Zhu B J, Wu X Z.Molecular cloning and characterization of a homologue of cytochrome coxidase subunit I in yellow grouper Epinephelus awoara. Journal of Fishery Sciences of China, 2009, 16(4): 467-476. (in Chinese)
[20]   Wang L M, Jan Stegemann P. Extraction of high quality RNA from polysaccharide matrices using cetlytrimethylammonium bromide. Biomaterials, 2010, 31(7): 1612.
[21]   Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 1987, 4(4): 406-425.
[22] Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony method. Molecular Biology and Evolution, 2011, 28(10): 2731-2739.
[23]   Jones G D, Jones M G, Wilson M T, Brunori M, Colosimo A, Sarti P. Reactions of cytochrome c oxidase with sodium dithionite. Biochemical Journal, 1983, 209(1): 175-182.
[24]   Devi K K, Kothamasi D. Pseudomonas fluorescens CHA0 can kill subterranean termite Odontotermes obesus by inhibiting cytochrome c oxidase of the termite respiratory chain. Fems Microbiology Letters, 2009, 300(2): 195-200.
[25]   李连之, 黄仲贤. 细胞色素c氧化酶研究新进展. 无机化学学报, 2001, 17(6): 761-774.
Li L Z, Huang Z X. Progresses in cytochrome c oxidase studies. Chinese journal of inorganic chemistry, 2001, 17(6): 761-774. (in Chinese)
[26]   Haltia T, Saraste M, Wikström M. Subunit III of cytochrome c oxidase is not involved in proton translocation: a site-directed mutagenesis study. The EMBO journal, 1991, 10(8): 2015-2021.
[27]   Haltia T, Finel M, Harms N, Nakari T, Raitio M, Wikström M, Saraste M. Deletion of the gene for subunit III leads to defective assembly of bacterial cytochrome oxidase. The EMBO Journal, 1989, 8(12): 3571-3579.
[28]   Riistama S, Puustinen A, García-Horsman A, Iwata S, Michel H, Wikström M. Channelling of dioxygen into the respiratory enzyme. Biochimica et Biophysica Acta (BBA)-Bioenergetics, 1996, 1275(1): 1-4.
[29]   闫华超, 高岚. 线粒体DNA遗传特性的研究新进展. 生物技术, 2003, 13(6): 63-65.
Yan H C, Gao L. Progresses in mitochondrial DNA genetic characteristics. biotechnology, 2003, 13(6): 63-65. (in Chinese)
[1] LI ShiJia,LÜ ZiJing,ZHAO Jin. Identification of R2R3-MYB Subfamily in Chinese Jujube and Their Expression Pattern During the Fruit Development [J]. Scientia Agricultura Sinica, 2022, 55(6): 1199-1212.
[2] Xiang XU,Yi XIE,LiYun SONG,LiLi SHEN,Ying LI,Yong WANG,MingHong LIU,DongYang LIU,XiaoYan WANG,CunXiao ZHAO,FengLong WANG,JinGuang YANG. Screening and Large-Scale Preparation of dsRNA for Highly Targeted Degradation of Tobacco Mosaic Virus (TMV) Nucleic Acids [J]. Scientia Agricultura Sinica, 2021, 54(6): 1143-1153.
[3] XiaoHe LIU,GuiSheng QIU,ZhaoGuo TONG,HuaiJiang ZHANG,WenTao YAN,Qiang YUE,LiNa SUN. Ligands Binding Characteristics of Chemosensory Protein CsasCSP16 of Carposina sasakii [J]. Scientia Agricultura Sinica, 2021, 54(5): 945-958.
[4] QIN JianHui,LI JinQiao,ZHAO Xu,LI KeBin,CAO YaZhong,YIN Jiao. Expression, Purification and Functional Analysis of Odorant Binding Protein 11 (OBP11) in Anomala corpulenta [J]. Scientia Agricultura Sinica, 2021, 54(14): 3017-3028.
[5] XIE KunLun,LIU LiMing,LIU Mei,PENG Bin,WU HuiJie,GU QinSheng. Prokaryotic Expression of dsRNA of Zucchini yellow mosaic virus and Its Control Efficacy on ZYMV [J]. Scientia Agricultura Sinica, 2020, 53(8): 1583-1593.
[6] WANG XinYue,SHI TianPei,ZHAO ZhiDa,HU WenPing,SHANG MingYu,ZHANG Li. The Analysis of PI3K-AKT Signal Pathway Based on the Proteomic Results of Sheep Embryonic Skeletal Muscle [J]. Scientia Agricultura Sinica, 2020, 53(14): 2956-5963.
[7] BI KeRan,LI Yin,HAN KaiKai,ZHAO DongMin,LIU QingTao,LIU YuZhuo,HUANG XinMei,YANG Jing. Prokaryotic Expression and Polyclonal Antibody Preparation of Duck Oligoadenylate Synthase-Like Protein [J]. Scientia Agricultura Sinica, 2019, 52(23): 4429-4436.
[8] Ling LI,Yao TAN,XiaoRong ZHOU,BaoPing PANG. Molecular Cloning, Prokaryotic Expression and Binding Characterization of Odorant Binding Protein GdauOBP20 in Galeruca daurica [J]. Scientia Agricultura Sinica, 2019, 52(20): 3705-3712.
[9] LI Du, NIU ChangYing, LI FengQi, LUO Chen. Binding Characterization of Odorant Binding Protein OBP56h in Drosophila suzukii with Small Molecular Compounds [J]. Scientia Agricultura Sinica, 2019, 52(15): 2616-2623.
[10] WANG Hui,CHAI ZhiXin,ZHU JiangJiang,ZHONG JinCheng,ZHANG ChengFu,Xin JinWei. Cloning and Identification of Long-Chain Non-Coding RNA Linc24063 and Its Correlation with the Expression Level of miRNAs in Yak [J]. Scientia Agricultura Sinica, 2019, 52(14): 2538-2547.
[11] YI Min,LÜ Qing,LIU KeKe,WANG LiJun,WU YuJiao,ZHOU ZeYang,LONG MengXian. Expression, Purification and Localization Analysis of Polar Tube Protein 2 (NbPTP2) from Nosema bombycis [J]. Scientia Agricultura Sinica, 2019, 52(10): 1830-1838.
[12] ZHANG Kui,LI ChongYang,SU JingJing,TAN Juan,XU Man,CUI HongJuan. Expression, Purification and Immunologic Function of Integrin β2 in the Silkworm (Bombyx mori) [J]. Scientia Agricultura Sinica, 2019, 52(1): 181-190.
[13] ZHAO Jie, REN SuWei, LIU Ning, AI XinYu, MA Ji, LIU XiaoNing. Cloning and Expression of Phosphatidylethanolamine Binding Protein in Helicoverpa armigera [J]. Scientia Agricultura Sinica, 2018, 51(8): 1493-1503.
[14] ZHI Shuang, REN YanHong, TANG Xing, XU FengXiang, WANG ChuanHong, ZHAO AiChun, WANG XiLing. Molecular Cloning and Expression Analysis of Genes MaGDHs Encoding Glutamate Dehydrogenase in Mulberry [J]. Scientia Agricultura Sinica, 2018, 51(4): 758-769.
[15] WANG ZhuangWei,WANG QingLian,XIA Jin,WANG XiCheng,SONG ZhiZhong,WU WeiMin. Cloning, Characterization and Expression Analysis of K +/H + Antiporter Genes in Grape [J]. Scientia Agricultura Sinica, 2018, 51(23): 4522-4534.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!