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Cassava MeRS40 is required for the regulation of plant salt tolerance

MA Xiao-wen, MA Qiu-xiang, MA Mu-qing, CHEN Yan-hang, GU Jin-bao, LI Yang, HU Qing, LUO Qing-wen, WEN Ming-fu, ZHANG Peng, LI Cong, WANG Zhen-yu
2023, 22 (5): 1396-1411.   DOI: 10.1016/j.jia.2023.04.003
Abstract318)      PDF in ScienceDirect      

Soil salinity affects the expression of serine/arginine-rich (SR) genes and isoforms by alternative splicing, which in turn regulates the adaptation of plants to stress.  We previously identified the cassava spliceosomal component 35 like (SCL) and SR subfamilies, belonging to the SR protein family, which are extensively involved in responses to abiotic stresses.  However, the post-transcriptional regulatory mechanism of cassava arginine/serine-rich (RS) subfamily in response to salt stress remains to be explored.  In the current study, we identified 37 genes of the RS subfamily from 11 plant species and systematically investigated the transcript levels of the RS40 and RS31 genes under diverse abiotic stress conditions.  Subsequently, an analysis of the conserved protein domains revealed that plant RS subfamily genes were likely to preserve their conserved molecular functions and played critical functional roles in responses to abiotic stresses.  Importantly, we found that overexpression of MeRS40 in Arabidopsis enhanced salt tolerance by maintaining reactive oxygen species homeostasis and up-regulating the salt-responsive genes.  However, overexpression of MeRS40 gene in cassava reduced salt tolerance due to the depression of its endogenous gene expression by negative autoregulation of its own pre-mRNA.  Moreover, the MeRS40 protein interacted with MeU1-70Ks (MeU1-70Ka and MeU1-70Kb) in vivo and in vitro, respectively.  Therefore, our findings highlight the critical role of cassava SR proteins in responses to salt stress in plants. 

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MicroRNA-370-5p inhibits pigmentation and cell proliferation by downregulating mitogen-activated protein kinase kinase kinase 8 expression in sheep melanocytes

JI Kai-yuan, WEN Ru-jun, WANG Zheng-zhou, TIAN Qian-qian, ZHANG Wei, ZHANG Yun-hai
2023, 22 (4): 1131-1141.   DOI: 10.1016/j.jia.2023.02.018
Abstract224)      PDF in ScienceDirect      

In mammals, microRNAs (miRNAs) play key roles in multiple biological processes by regulating the expression of target genes.  Studies have found that the levels of miR-370-5p expression differ significantly in the skins of sheep with different hair colors; however, its function remains unclear.  In this study, we investigated the roles of miR-370-5p in sheep melanocytes and found that the overexpression of miR-370-5p significantly inhibited cell proliferation (P<0.01), tyrosinase activity (P=0.001) and significantly reduced (P<0.001) melanin production.  Functional prediction revealed that the 3´-untranslated region (UTR) of MAP3K8 has a putative miR-370-5p binding site, and the interaction between these two molecules was confirmed using luciferase reporter assays.  In situ hybridization assays revealed that MAP3K8 is expressed in the cytoplasm of melanocytes.  The results of quantitative RT-PCR and Western blotting analyses revealed that overexpression of miR-370-5p in melanocytes significantly inhibits (P<0.01) MAP3K8 expression via direct targeting of its 3´ UTR.  Inhibition of MAP3K8 expression by siRNA-MAP3K8 transfection induced a significant inhibition (P<0.01) of melanocyte proliferation and significant reduction (P<0.001) in melanin production, which is consistent with our observations for miR-370-5p.  Target gene rescue experiments indicated that the expression of MAP3K8 in melanocytes co-transfected with miR-370-5p and MAP3K8-cDNA (containing sites for the targeted binding to miR-370-5p) was significantly rescued (P≤0.001), which subsequently promoted significant increases in cell proliferation (P<0.001) and melanin production (P<0.01).  Collectively, these findings indicate that miR-370-5p plays a functional role in inhibiting sheep melanocyte proliferation and melanogenesis by downregulating the expression of MAP3K8.  

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A multiplex real-time PCR assay for simultaneous detection of classical swine fever virus, African swine fever virus and atypical porcine pestivirus
SONG Xiang-peng, XIA Ying-ju, XU Lu, ZHAO Jun-jie, WANG Zhen, ZHAO Qi-zu, LIU Ye-bing, ZHANG Qian-yi, WANG Qin
2023, 22 (2): 559-567.   DOI: 10.1016/j.jia.2022.08.115
Abstract211)      PDF in ScienceDirect      

With the implementation of the C-strain vaccine, classical swine fever (CSF) has been under control in China, which is currently in a chronic atypical epidemic situation.  African swine fever (ASF) emerged in China in 2018 and spread quickly across the country. It is presently occurring sporadically due to the lack of commercial vaccines and farmers’ increased awareness of biosafety.  Atypical porcine pestivirus (APPV) was first detected in Guangdong Province, China, in 2016, which mainly harms piglets and has a local epidemic situation in southern China.  These three diseases have similar clinical symptoms in pig herds, which cause considerable losses to the pig industry.  They are difficult to be distinguished only by clinical diagnosis.  Therefore, developing an early and accurate simultaneous detection and differential diagnosis of the diseases induced by these viruses is essential.  In this study, three pairs of specific primers and Taq-man probes were designed from highly conserved genomic regions of CSFV (5´ UTR), African swine fever virus (ASFV) (B646L), and APPV (5´ UTR), followed by the optimization of reaction conditions to establish a multiplex real-time PCR detection assay.  The results showed that the method did not cross-react with other swine pathogens (porcine circovirus type 2 (PCV2), porcine reproductive and respiratory syndrome virus (PRRSV), foot-and-mouth disease virus (FMDV), pseudorabies virus (PRV), porcine parvovirus (PPV), and bovine viral diarrhea virus BVDV).  The sensitivity results showed that CSFV, ASFV, and APPV could be detected as low as 1 copy mL–1; the repeatability results showed that the intra-assay and inter-assay coefficient of variation of ASFV, CSFV, and APPV was less than 1%.  Twenty-two virus samples were detected by the multiplex real-time PCR, compared with national standard diagnostic and patented method assay for CSF (GB/T 27540–2011), ASF (GB/T 18648–2020), and APPV (CN108611442A), respectively.  The sensitivity of this triple real-time PCR for CSFV, ASFV, and APPV was almost the same, and the  compliance results were the same (100%).  A total of 451 clinical samples were detected, and the results showed that the positive rates of CSFV, ASFV, and APPV were 0.22% (1/451), 1.3% (6/451), and 0% (0/451), respectively.  This assay provides a valuale tool for rapid detection and accurate diagnosis of CSFV, ASFV, and APPV.

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Physiological mitochondrial ROS regulate diapause by enhancing HSP60/Lon complex stability in Helicoverpa armigera
ZHANG Xiao-shuai, SU Xiao-long, GENG Shao-lei, WANG Zheng-hao
2022, 21 (6): 1703-1712.   DOI: 10.1016/S2095-3119(20)63578-X
Abstract216)      PDF in ScienceDirect      
Diapause is a long-lived stage which has evolved into an important strategy for insects to circumvent extreme environments.  In the pupal stage, Helicoverpa armigera can enter diapause, a state characterized by significantly decreased metabolic activity and enhanced stress resistance, to survive cold winters.  Previous studies have shown that reactive oxygen species (ROS) can promote the diapause process by regulating a distinct insulin signaling pathway.  However, the source of ROS in the diapause-destined pupal brains and mechanisms by which ROS regulate diapause are still unknown.  In this study, we showed that diapause-destined pupal brains accumulated high levels of mitochondrial ROS (mtROS) and total ROS during the diapause process, suggesting that mitochondria are the main source of ROS in diapause-destined pupal brains.  In addition, injection of 2-deoxy-D-glucose (DOG), a glucose metabolism inhibitor, could delay pupal development by elevating mtROS levels in the nondiapause-destined pupal brains.  Furthermore, the injection of a metabolite mixture to increase metabolic activity could avert the diapause process in diapause-destined pupae by decreasing mtROS levels.  We also found that ROS could activate HSP60 expression and promote the stability of the HSP60-Lon complex, increasing its ability to degrade mitochondrial transcription factor A (TFAM) and decreasing mitochondrial activity or biogenesis under oxidative stress.  Thus, this study illustrated the beneficial function of ROS in diapause or lifespan extension by decreasing mitochondrial activity.
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Sodium dehydroacetate treatment prolongs the shelf-life of ‘Kyoho’ grape by regulating oxidative stress and DNA methylation
GUO Da-long, LIU Hai-nan, WANG Zhen-guang, GUO Li-li, ZHANG Guo-hai
2022, 21 (5): 1525-1533.   DOI: 10.1016/S2095-3119(21)63765-6
Abstract147)      PDF in ScienceDirect      
In this study, we tested the ability of sodium dehydroacetate (SD) to extend the shelf-life of ‘Kyoho’ grape.  Among the different concentrations of SD tested (0, 0.01, 0.1 and 1.0 mmol L–1), 0.01 mmol L–1 SD was the most effective in prolonging the shelf-life of ‘Kyoho’ grape.  Compared with the control, the weight loss rate, browning index and hydrogen peroxide (H2O2) and malonaldehyde contents were significantly lower in the 0.01 mmol L–1 SD treatment, whereas the healthy berry rate, berry firmness, total soluble solids (TSS) content, ascorbic acid content and superoxide dismutase (SOD) activity were significantly higher.  In addition, an analysis of ‘Kyoho’ grape DNA using methylation sensitive amplification polymorphism (MSAP) markers showed that the average DNA methylation level was significantly higher in the 0.01 mmol L–1 SD treatment than in the control.  Together, these results indicate that 0.01 mmol L–1 SD could be used to extend the shelf-life of ‘Kyoho’ grape.  Moreover, a strong connection between reactive oxygen species (ROS) metabolism and DNA methylation change during storage was revealed.
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Characteristics of lodging resistance of high-yield winter wheat as affected by nitrogen rate and irrigation managements
LI Wen-qian, HAN Ming-ming, PANG Dang-wei, CHEN Jin, WANG Yuan-yuan, DONG He-he, CHANG Yong-lan, JIN Min, LUO Yong-li, LI Yong, WANG Zhen-lin
2022, 21 (5): 1290-1309.   DOI: 10.1016/S2095-3119(20)63566-3
Abstract279)      PDF in ScienceDirect      
High yields of wheat are mainly obtained through a high level of nitrogen and irrigation supplementation.  However, excessive nitrogen and irrigation supplication increase the risk of lodging.  The main objectives of this work were to clarify the capacity of lodging resistance of wheat in response to nitrogen and irrigation, as well as to explore the effective ways of improving lodging resistance in a high-yield wheat cultivar. In this study, field experiments were conducted in the 2015–2016 and 2016–2017 growing seasons.  A wheat cultivar Jimai 22 (JM22), which is widely planted in the northern of Huang-Huai winter wheat region, was grown at Tai’an, Shandong Province, under three nitrogen rates and four irrigation treatments.  The lodging risk was increased with increased nitrogen rate, as indicated by increasing lodging index (LI) and lodging rate across both growing seasons.  With nitrogen increasing, the plant height, the basal internode length and the center of gravity height, which were positively correlated with LI, increased significantly.  While the density of the basal 2nd internode (for culm and leaf sheath) and cell wall component contents, which were negatively correlated with LI, decreased conspicuous along with nitrogen increased.  Increasing irrigation supplementation increased the 2nd internode culm wall thickness, breaking strength and leaf sheath density within limits which increased stem strength.  Among the treatments, nitrogen application at a rate of 240 kg ha–1 and irrigation application at 600 m3 ha–1 at both the jointing and anthesis stages resulted in the highest yield and strongest stem.  A suitable plant height ensures sufficient biomass for high yield, and higher stem stiffness, which was primarily attributed to thicker culm wall, greater density of the culm and leaf sheaths and higher cell wall component contents are the characteristics that should be taken into account to improving wheat lodging resistance.

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Detection of quantitative trait loci (QTL) associated with spring regrowth in alfalfa (Medicago sativa L.)
JIANG Xue-qian, ZHANG Fan, WANG Zhen, LONG Rui-cai, LI Ming-na, HE Fei, YANG Xi-jiang, YANG Chang-fu, JIANG Xu, YANG Qing-chuan, WANG Quan-zhen, KANG Jun-mei
2022, 21 (3): 812-818.   DOI: 10.1016/S2095-3119(21)63671-7
Abstract231)           
Spring regrowth is an important trait for perennial plants including alfalfa, the most cultivated forage legume worldwide.  However, the genetic and genomic basis of the trait is largely unknown in alfalfa due to its complex genetic background of the tetroploid genome.  The objective of this study was to identify quantitative trait loci (QTLs) associated with spring regrowth using high-resolution genetic linkage maps we constructed previously.  In total, 36 significant additive effect QTLs for the trait were detected.  Among them, 10 QTLs individually explained more than 10% of the phenotypic variation (PVE) with four in P1 and six in P2.  Six overlapped QTLs intervals were detected with two and four intervals distributed in P1 and P2, respectively.  In P1, both overlapped genomic regions were located on homolog 7D.  In P2, the four QTLs with PVE>10% were co-localized on homolog 6D.  Meanwhile, six pairs of significant epistatic QTLs were identified in P2.  Screening of potential candidate genes associated with four overlapped QTLs (qCP2019-8, qLF2019-5, qLF2020-4, and qBLUP-3) narrowed down one candidate annotated as MAIL1.  The Arabidopsis homolog gene has been reported to play an important role in plant growth.  Therefore, the detected QTLs are valuable resources for genetic improvement of alfalfa spring vigor using marker-assisted selection (MAS), and further identification of the associated genes would provide insights into genetic control of spring regrowth in alfalfa.
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Utilizing comprehensive decision analysis methods to determine an optimal planting pattern and nitrogen application for winter oilseed rape
DU Ya-dan, CUI Bing-jing, ZHANG Qian, SUN Jun, WANG Zhen, NIU Wen-quan
2020, 19 (9): 2229-2238.   DOI: 10.1016/S2095-3119(19)62870-4
Abstract115)      PDF in ScienceDirect      
Oilseed rape is one of the most important oil crops globally.  Attaining the appropriate cultivation method (planting pattern and nitrogen level) is necessary to achieve high yield, quality and resource utilization efficiency.  However, the optimal method for oilseed rape varies across countries and regions.  The objective of the present study was to determine an appropriate cultivation method, including planting pattern and nitrogen application, for winter oilseed rape in northwestern China.  Two planting patterns: ridge film mulching and furrow planting (RFMF) and flat planting (FP), and six nitrogen (N) amounts: 0 (N0), 60 (N60), 120 (N120), 180 (N180), 240 (N240), and 300 (N300) kg N ha–1 were applied across three growing seasons (2014–2017).  Three comprehensive decision analysis methods: principal component analysis, grey correlation degree analysis and the combined entropy weight and dynamic technique for order preference by similarity to ideal solution method were used to evaluate the growth and physiological indicators, nutrient uptake, yield, quality, evapotranspiration, and water use efficiency of winter oilseed rape.  Planting pattern, nitrogen amount and their interaction significantly affected the indicators aforementioned.  The RFMF pattern significantly increased all indicators over the FP pattern.  Application of N also markedly increased all the indicators except for seed oil content, but the yield, oil production and water use efficiency were decreased when N fertilizer exceeded 180 kg N ha–1 under FP and 240 kg N ha–1 under RFFM.  The evaluation results of the three comprehensive decision analysis methods indicated that RFMF planting pattern with 240 kg N ha–1 is an appropriate cultivation method for winter oilseed rape in northwestern China.  These findings are of vital significance to maximize yield, optimize quality and improve resource use efficiencies of winter oilseed rape.
 
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FgHAT2 is involved in regulating vegetative growth, conidiation, DNA damage repair, DON production and virulence in Fusarium graminearum
Lü Wu-yun, YANG Nan, XU Zhe, DAI Han, TANG Shuai, WANG Zheng-yi
2020, 19 (7): 1813-1824.   DOI: 10.1016/S2095-3119(19)62819-4
Abstract188)      PDF in ScienceDirect      
Histone lysine acetylation is catalyzed by acetyltransferases (HATs), which is important in regulating gene expression and physiological function in eukaryotic cells.  HATs can be classified into two main types: A- and B-type HATs.  Recently, in Fusarium graminearum, it has been reported that A-type HATs are involved in hyphal development, conidiation, sexual reproduction and virulence.  However, the biological roles of B-type HATs are unknown.  Here we report the identification and characterization of two B-type HATs (FgHat1 and FgHat2) in F. graminearum.  Targeted deletion of FgHAT1 did not result in any detectable phenotypes.  However, ΔFghat2 mutants were severely defective in vegetative growth, conidia production and morphogenesis, deoxynivalenol (DON) biosynthesis and virulence.  Interestingly, deletion of FgHAT2 resulted in significantly increased sensitivity to the DNA-damaging agent methyl methanesulfonate (MMS).  Furthermore, double deletion mutants (ΔFghat1ΔFghat2) displayed similar phenotypes to the ΔFghat2 mutants.  Taken together, we conclude that FgHat2 but not FgHat1 plays essential roles in regulating morphogenesis, DNA damage repair, DON production and virulence in F. graminearum.
 
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Investigating structural impact of a valine to isoleucine substitution on anti-Müllerian hormone in silico and genetic association of the variant and AMH expression with egg production in chickens
DANG Li-ping, LIU Rui-fang, ZHAO Wen-yan, ZHOU Wen-xin, MIN Yu-na, WANG Zhe-peng
2020, 19 (6): 1635-1643.   DOI: 10.1016/S2095-3119(20)63176-8
Abstract183)      PDF in ScienceDirect      
Anti-Müllerian hormone (AMH) acts in maintaining orderly cyclic recruitment of early follicles, suggesting that it is a promising candidate for influencing animal reproductive efficiency.  This study aimed to elucidate the effect of a missense mutation of Val566Ile on the structure of AMH protein and the genetic association of Val566Ile and AMH expression with egg production in chickens.  Structural perturbations of Val566Ile were predicted by homology modeling.  The association of the variant with the number of eggs was tested using a quantitative trait transmission disequilibrium test model. AMH expression in granulosa cells in Lueyang black-boned chickens was compared with that in Nick chickens.  The Val566 of AMH is a non-conservative amino acid among mammals and birds, but its hydrophobicity is completely conservative.  The substitution of Val566 for Ile566 potentially disrupted hydrogen bonds and solvent accessibility of 22 residues and created a short α-helix in the C terminus of AMH.  Despite having striking structure-disrupting potential, the variant was not statistically associated with the number of eggs (P>0.05) in the Lueyang black-boned chickens.  We did not detect differential expression of AMH between Lueyang black-boned chickens and Nick chickens (P>0.05).  These results confirmed the structural impact of Val566Ile, but suggested that Val566Ile and AMH expression might not be the major genetic determinants for egg production in Lueyang black-boned chickens.
 
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Improved soil characteristics in the deeper plough layer can increase grain yield of winter wheat
CHEN Jin, PANG Dang-wei, JIN Min, LUO Yong-li, LI Hao-yu, LI Yong, WANG Zhen-lin
2020, 19 (5): 1215-1226.   DOI: 10.1016/S2095-3119(19)62679-1
Abstract137)      PDF in ScienceDirect      
In the North China Plain (NCP), soil deterioration threatens winter wheat (Triticum aestivum L.) production.  Although rotary tillage or plowing tillage are two methods commonly used in this region, research characterizing the effects of mixed tillage on soil characteristics and wheat yield has been limited.  A fixed-site field trial was carried out during 2011–2016 to examine the impacts of three tillage practices (5-year rotary tillage with maize straw removal (RT); 5-year rotary tillage with maize straw return (RS); and annual RS and with a deep plowing interval of 2 years (RS/DS)) on soil characteristics and root distribution in the plough layer.  Straw return significantly decreased soil bulk density, increased soil organic carbon (SOC) storage and SOC content, macro-aggregate proportion (R0.25) and its stability in the plough layer.  The RS/DS treatment significantly increased the SOC content, total nitrogen (TN), and root length density (RLD) in the 10–40 cm layer, and enhanced the proportion of RLD in the 20–30 and 30–40 cm layers.  In the 20–30 and 30–40 cm layers, an increase in SOC and TN could lead to higher grain production than commensurate increases in the surface layer, resulting in a sustainable increase in grain yield from the RS/DS treatment.  Thus, the RS/DS treatment could lead to high productivity of winter wheat by improving soil characteristics and root distribution at the deeper plough layer in the NCP.
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Expression and contribution of microphthalmia-associated transcription factor to the melanin deposition in Liancheng white ducks
XIN Qing-wu, MIAO Zhong-wei, LIU Zhao-yuan, LI Li, ZHANG Lin-li, ZHU Zhi-ming, ZHANG Zheng-hong, ZHENG Nen-zhu, WANG Zheng-chao
2020, 19 (3): 800-809.   DOI: 10.1016/S2095-3119(19)62736-X
Abstract101)      PDF in ScienceDirect      
The present study investigates the expression of microphthalmia-associated transcription factor (MITF) and its contribution to the melanin deposition in Liancheng white ducks.  Nested PCR was used to clone the MITF gene sequence from the skin tissue of female Liancheng white ducks.  Ultraviolet spectrophotometry was used to detect the melanin deposition.  MITF mRNA expression and melanin deposition in different tissues and organs were detected and their correlation was analyzed.  The MITF gene (GenBank number: MG516570) was 1 323 bp in length, contains a complete CDS region (34–1 323 bp) and codes 429 amino acids with 100% homology to the MITF of Anas platyrhynchos and over 95% homology to those of Gallus gallus and Coturnix japonica.  Genetic evolution analysis reveals a close relationship of Liancheng white ducks with A. platyrhynchos, and also to lesser extents with Anser cygnoides, silky fowl and G. gallus, as well as Sus scrofa, Ovis aries and other mammals.  Real-time quantitative PCR (qPCR) analysis demonstrated that MITF was expressed in skin, gizzard, liver, kidney and muscle, and of these tissues, its expression was the highest in the skin tissue (skin>gizzard>liver>kidney>muscle).  Ultraviolet spectrophotometry showed that melanin deposition was positively correlated with the MITF expression level in these five tissues and organs (P<0.05).  Together, these results demonstrated a tissue-specific pattern of MITF expression and a positive correlation between MITF expression and melanin deposition, indicating that MITF expression may contribute to the melanin deposition in Liancheng white ducks.
 
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Cloning and functional characterization of two peptidoglycan recognition protein isoforms (PGRP-LC) in Bactrocera dorsalis (Diptera: Tephritidae)
WEI Dong, WANG Zhe, XU Hui-qian, NIU Jin-zhi, WANG Jin-jun
2020, 19 (12): 3025-3034.   DOI: 10.1016/S2095-3119(20)63202-6
Abstract85)      PDF in ScienceDirect      
The innate immune system of insects is the front line of self-defense against pathogen invasion.  Peptidoglycan recognition proteins (PGRPs) are important components and play key roles in insect immune systems by recognizing peptidoglycan (PGN) in bacterial cell walls.  We characterized two isoforms of the PGRP-LC gene, BdPGRP-LCa and BdPGRP-LCb, from Bactrocera dorsalis (Hendel), an important fruit and vegetable pest worldwide.  These two isoforms contain an open reading frames of 1 668 bp and 1 731 bp, encoding a protein of 555 and 576 amino acids, respectively.  Quantitative real-time PCR results showed that both transcripts were prominently expressed in midgut and fat body of B. dorsalis adult.  Inoculation of pathogens showed that both isoforms actively responded to Escherichia coli PGN.  We also observed a light response to Staphylococcus aureus PGN.  Upon Beauveria bassiana inoculation, the expression of BdPGRP-LCa was enhanced, but the expression of BdPGRP-LCb was suppressed.  Suppression of both transcripts by RNA interference led to increased mortality of flies challenged by E. coli, indicating that the two isoforms are involved in sensing Gram-negative bacterial infections.
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Exploration of the key microbes and composition stability of microbial consortium GF-20 with efficiently decomposes corn stover at low temperatures
YU Xiao-fang, BORJIGIN Qinggeer, GAO Ju-lin, WANG Zhi-gang, HU Shu-ping, BORJIGIN Naoganchaolu, WANG Zhen, SUN Ji-ying, HAN Sheng-cai
2019, 18 (8): 1893-1904.   DOI: 10.1016/S2095-3119(19)62609-2
Abstract169)      PDF in ScienceDirect      
The microbial consortium GF-20 (GF-20) can efficiently decompose corn stover at low temperatures.  The present study explored the key microbes of GF-20 and evaluated different culture conditions on its composition stability to promote the utilization of corn stover decomposing microbes in low temperature regions.  GF-20 was subcultured to the 15th generation under different temperatures, pHs, carbon, and nitrogen sources.  Then, the dynamics of fermenting pH, cellulose enzyme activities, carbohydrate concentration, and oxidation reduction potential were determined to estimate the degradation efficiency of corn stover with GF-20.  Furthermore, the structural stability and functional microbes of GF-20 were identified on the basis of PCR-denaturing gradient gel electrophoresis (DGGE) profiling and principal component analysis.  The results showed that the offspring of GF-20 subcultured under different temperatures (4–30°C) and pH (6.0–9.0) conditions maintained stable growth, decomposition function, and composition structure.  Furthermore, consortia GF-20 had a stable composition structure, which induced GF-20 to secrete cellulose and promote substrate decomposition as corn stover and ammonium were used as sources of carbon and nitrogen, respectively.  According to the PCR-DGGE profiles, the key strains of GF-20 were determined to be Bacillus licheniformis, Cellvibrio mixtus subsp. mixtus, Bacillus tequilensis, Clostridium populeti, and Clostridium xylanolyticum.
 
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Pre-harvest spraying of oxalic acid improves postharvest quality associated with increase in ascorbic acid and regulation of ethanol fermentation in kiwifruit cv. Bruno during storage
Maratab Ali, LIU Meng-meng, WANG Zhen-e, LI Sheng-e, JIANG Tian-jia, ZHENG Xiao-lin
2019, 18 (11): 2514-2520.   DOI: 10.1016/S2095-3119(19)62791-7
Abstract107)      PDF in ScienceDirect      
The kiwifruit trees (Actinidia deliciosa cv. Bruno) were sprayed with 5 mmol L–1 oxalic acid (OA) or water (as control) at 130, 137 or 144 d after full-blossom, and then the fruit were harvested at commercial maturity and stored at room temperature (20±1)°C for 13 d.  The effect of pre-harvest spraying of OA on postharvest quality of kiwifruit was evaluated during storage.  The OA spraying slowed the increase in soluble solids content (SSC) and decrease in titratable acid (TA), as well as increased contents of ascorbic acid (AsA) and total-AsA accompanied with higher AsA/DHA ratio in kiwifruit during storage.  Moreover, the OA spraying significantly reduced the contents of acetaldehyde and ethanol in kiwifruit, along with significant decrease in activities of enzymes involved in ethanol fermentation metabolism during the later period of storage, which was beneficial to control off-flavor associated with over accumulation of ethanol during postharvest.  It was suggested that pre-harvest spraying of OA might maintain the postharvest quality of kiwifruit in relation to delay in fruit ripening, AsA maintenance and regulation of ethanol fermentation.
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Molecular mapping of YrTZ2, a stripe rust resistance gene in wild emmer accession TZ-2 and its comparative analyses with Aegilops tauschii
WANG Zhen-zhong, XIE Jing-zhong, GUO Li, ZHANG De-yun, LI Gen-qiao, FANG Ti-lin, CHEN Yongxing, LI Jun, WU Qiu-hong, LU Ping, LI Miao-miao, WU Hai-bin, ZHANG Huai-zhi, ZHANG Yan, YANG Wu-yun, LUO Ming
2018, 17 (06): 1267-1275.   DOI: 10.1016/S2095-3119(17)61846-X
Abstract475)      PDF in ScienceDirect      
Wheat stripe rust, caused by Puccinia striiformis f. sp. tritici (Pst), is a devastating disease that can cause severe yield losses.  Identification and utilization of stripe rust resistance genes are essential for effective breeding against the disease.  Wild emmer accession TZ-2, originally collected from Mount Hermon, Israel, confers near-immunity resistance against several prevailing Pst races in China.  A set of 200 F6:7 recombinant inbred lines (RILs) derived from a cross between susceptible durum wheat cultivar Langdon and TZ-2 was used for stripe rust evaluation.  Genetic analysis indicated that the stripe rust resistance of TZ-2 to Pst race CYR34 was controlled by a single dominant gene, temporarily designated YrTZ2.  Through bulked segregant analysis (BSA) with SSR markers, YrTZ2 was located on chromosome arm 1BS flanked by Xwmc230 and Xgwm413 with genetic distance of 0.8 cM (distal) and 0.3 cM (proximal), respectively.  By applying wheat 90K iSelect SNP genotyping assay, 11 polymorphic loci (consisting of 250 SNP markers) closely linked to YrTZ2 were identified.  YrTZ2 was further delimited into a 0.8-cM genetic interval between SNP marker IWB19368 and SSR marker Xgwm413, and co-segregated with SNP marker IWB28744 (co-segregated with 28 SNP).  Comparative genomics analyses revealed high level of collinearity between the YrTZ2 genomic region and the orthologous region of Aegilops tauschii 1DS.  The genomic region between loci IWB19368 and IWB31649 harboring YrTZ2 is orthologous to a 24.5-Mb genomic region between AT1D0112 and AT1D0150, spanning 15 contigs on chromosome 1DS.  The genetic and comparative maps of YrTZ2 provide a framework for map-based cloning and marker-assisted selection of YrTZ2.
 
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Structure and expression analysis of the sucrose synthase gene family in apple
TONG Xiao-lei, WANG Zheng-yang, MA Bai-quan, ZHANG Chun-xia, ZHU Ling-cheng, MA Feng-wang, LI Ming-jun
2018, 17 (04): 847-856.   DOI: 10.1016/S2095-3119(17)61755-6
Abstract628)      PDF in ScienceDirect      
Sucrose synthases (SUS) are a family of enzymes that play pivotal roles in carbon partitioning, sink strength and plant development.  A total of 11 SUS genes have been identified in the genome of Malus domestica (MdSUSs), and phylogenetic analysis revealed that the MdSUS genes were divided into three groups, named as SUS I, SUS II and SUS III, respectively.  The SUS I and SUS III groups included four homologs each, whereas the SUS II group contained three homologs.  SUS genes in the same group showed similar structural characteristics, such as exon number, size and length distribution.  After assessing four different tissues, MdSUS1s and MdSUS2.1 showed the highest expression in fruit, whereas MdSUS2.2/2.3 and MdSUS3s exhibit the highest expression in shoot tips.  Most MdSUSs showed decreased expression during fruit development, similar to SUS enzyme activity, but both MdSUS2.1 and MdSUS1.4 displayed opposite expression profiles.  These results suggest that different MdSUS genes might play distinct roles in the sink-source sugar cycle and sugar utilization in apple sink tissues.
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Enzymatic activity and chlorophyll fluorescence imaging of maize seedlings (Zea mays L.) after exposure to low doses of chlorsulfuron and cadmium
ZHAO Li-juan, XIE Jing-fang, ZHANG Hong, WANG Zhen-tao, JIANG Hong-jin, GAO Shao-long
2018, 17 (04): 826-836.   DOI: 10.1016/S2095-3119(17)61717-9
Abstract749)      PDF in ScienceDirect      
The aim of this research was to study the influence of chlorsulfuron residue and cadmium on the enzymatic activity and photosynthetic apparatus of maize (Zea mays L.) plants.  Chlorsulfuron and cadmium at 0.001 and 5.0 mg kg–1, respectively, were mixed and applied to soil prior to planting.  The levels of chlorsulfuron- and cadmium-induced stress to plants were estimated by growth, chlorophyll content, lipid peroxide content, enzyme activities, and major fluorescence parameters of chlorophyll (revealed by the fluorescence imaging system FluorCam).  Chlorsulfuron negatively affected the chlorophyll content, photochemical efficiency of photosystem II in the dark-adapted state, the maximum efficiency of photosystem II, photochemical quenching coefficient, and steady-state fluorescence decline ratio in the leaves of maize seedlings.  However, cadmium did not produce noticeable changes.  Plants that were exposed to both chlorsulfuron and cadmium showed an obvious increase in the steady-state fluorescence decline ratio.  These results implied that the seedlings possessed more resistance to cadmium than to chlorsulfuron and their resistance to chlorsulfuron toxicity was enhanced by the presence of cadmium.  The results also suggested that chlorophyll fluorescence imaging reveals overall alterations within the leaves but may not reflect small-scale effects on tissues, as numeric values of specific parameters are averages of the data collected from the whole leaf.
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Evaluation of a new method for quantification of heat tolerance in different wheat cultivars
LI Qiang, WANG Zheng-rui, LI Ding, WEI Jian-wei, QIAO Wen-chen, MENG Xiang-hai, SUN Shu-luan, LI Hui-min, ZHAO Ming-hui, CHEN Xiu-min, ZHAO Feng-wu
2018, 17 (04): 786-795.   DOI: 10.1016/S2095-3119(17)61716-7
Abstract643)      PDF in ScienceDirect      
Heat stress seriously affects wheat production in many regions of the world.  At present, heat tolerance research remains one of the least understood fields in wheat genetics and breeding and there is a lack of effective methods to quantify heat stress and heat tolerance in different wheat cultivars.  The objective of this study was to use various wheat cultivars to evaluate stress intensity (δ) and a new method for quantification of heat tolerance and compare this technique with three other currently utilized methods.  This new parameter for heat tolerance quantification is referred to as the heat tolerance index (HTI) and is an indicator of both yield potential and yield stability.  Heat treatments were applied in a controlled setting when anthesis had been reached for 80% of the wheat.  The stress intensity evaluation indicated heat shock was the main factor associated with kernel weight reduction while grain yield reduction was mainly associated with chronic high temperature.  The methods evaluation showed that a temperature difference of 5°C from natural temperatures was a suitable heat treatment to compare to the untreated controls.  HTI was positively correlated with yield under heat stress (r=0.8657, δ2010=0.15, in 2009–2010; r=0.8418, δ2011=0.20, in 2010–2011; P<0.01), and negatively correlated with yield reduction rate (r=–0.8344, in 2009–2010; r=–0.7158, in 2010–2011; P<0.01).  The results of this study validated the use of HTI and temperature difference control for quantifying wheat heat tolerance that included the yield potential and the stability of different wheat cultivars under heat stress.  Additionally, 10 wheat cultivars showed high HTI and should be further tested for their heat confirming characteristics for use in wheat heat tolerance breeding.
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The characterization of acid and pepsin soluble collagen from ovine bones (Ujumuqin sheep)
GAO Ling-ling, WANG Zhen-yu, LI Zheng, ZHANG Cai-xia, ZHANG De-quan
2018, 17 (03): 704-711.   DOI: 10.1016/S2095-3119(17)61751-9
Abstract727)      PDF in ScienceDirect      
Ovine bones are the major by-products after slaughtered.  The present study was conducted to extract and characterize acid soluble collagens (ASC) and pepsin soluble collagens (PSC) from ovine bones (Ujumuqin sheep).  Ovine bones collagen were identified by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and liquid chromatography-tandem mass spectrometry (LC-MS/MS) as type I collagen.  The results of Fourier transform infrared (FTIR) spectra analysis testified the existence of triple superhelical structure in both ASC and PSC, showing pepsin did not disrupt the triple helical structure of ovine bones collagen.  Glycine, accounting for one-third of total amino acids, was the major amino acid for ovine bones collagen.  Higher imino acid content was responsible for higher thermal denaturation temperature of ovine bones collagen compared to fish collagens.  The isoelectric point of ASC was lower than PSC due to the higher content of acidic amino acids.  Therefore, this study provides the potential reference for collagen extraction and application of ovine bones by-procduct.
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Transcriptome analysis of salt-responsive genes and SSR marker exploration in Carex rigescens using RNA-seq
LI Ming-na, LONG Rui-cai, FENG Zi-rong, LIU Feng-qi, SUN Yan, ZHANG Kun, KANG Jun-mei, WANG Zhen, CAO Shi-hao
2018, 17 (01): 184-196.   DOI: 10.1016/S2095-3119(17)61749-0
Abstract700)      PDF in ScienceDirect      
Carex rigescens (Franch.) V. Krecz is a wild turfgrass perennial species in the Carex genus that is widely distributed in salinised areas of northern China.  To investigate genome-wide salt-response gene networks in C. rigescens, transcriptome analysis using high-throughput RNA sequencing on C. rigescens exposed to a 0.4% salt treatment (Cr_Salt) was compared to a non-salt control (Cr_Ctrl).  In total, 57 742 546 and 47 063 488 clean reads were obtained from the Cr_Ctrl and Cr_Salt treatments, respectively.  Additionally, 21 954 unigenes were found and annotated using multiple databases.  Among these unigenes, 34 were found to respond to salt stress at a statistically significant level with 6 genes up-regulated and 28 down-regulated.  Specifically, genes encoding an EF-hand domain, ZFP and AP2 were responsive to salt stress, highlighting their roles in future research regarding salt tolerance in C. rigescens and other plants.  According to our quantitative RT-PCR results, the expression pattern of all detected differentially expressed genes were consistent with the RNA-seq results.  Furthermore, we identified 11 643 simple sequence repeats (SSRs) from the unigenes.  A total of 144 amplified successfully in the C. rigescens cultivar Lüping 1, and 69 of them reflected polymorphisms between the two genotypes tested.  This is the first genome-wide transcriptome study of C. rigescens in both salt-responsive gene investigation and SSR marker exploration.  Our results provide further insights into genome annotation, novel gene discovery, molecular breeding and comparative genomics in C. rigescens and related grass species.
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Modulation of protein expression in alfalfa (Medicago sativa L.) root and leaf tissues by Fusarium proliferatum
CONG Li-li, SUN Yan, LONG Rui-cai, KANG Jun-mei, ZHANG Tie-jun, LI Ming-na, WANG Zhen, YANG Qing-chuan
2017, 16 (11): 2558-2572.   DOI: 10.1016/S2095-3119(17)61690-3
Abstract725)      PDF in ScienceDirect      
Alfalfa (Medicago sativa L.) is an important forage crop and is also a target of many fungal diseases including Fusarium spp.  As of today, very little information is available about molecular mechanisms that contribute to pathogenesis and defense responses in alfalfa against Fusarium spp. and specifically against Fusarium proliferatum, the causal agent of alfalfa root rot.  In this study, we used a proteomic approach to identify inducible proteins in alfalfa during a compatible interaction with F. proliferatum strain YQC-L1.  Samples used for the two-dimensional gel electrophoresis (2-DE) and MALDI-TOF/TOF mass spectrometry were from roots and leaves of alfalfa cultivar AmeriGraze 401+Z and WL656HQ.  Plants were grown in hydroponic conditions and at 4 days post inoculation with YQC-L1.  Our disease symptom assays indicated that AmeriGraze 401+Z  was tolerant to YQC-L1 infection while WL656HQ was highly susceptible.  Analysis of differentially expressed proteins found in the 2-DE was further characterized using the MASCOT MS/MS ion search software and associated databases to identify multiple proteins that might be involved in F. proliferatum resistance.  A total of 66 and 27 differentially expressed proteins were found in the roots and leaves of the plants inoculated with YQC-L1, respectively.  These identified proteins were placed in various categories including defense and stress response related metabolism, photosynthesis and protein synthesis.  Thirteen identified proteins were validated for their expressions by quantitative reverse transcription (qRT)-PCR.  Our results suggested that some of the identified proteins might play important roles in alfalfa resistance against Fusarium spp.  These finding could facilitate further dissections of molecular mechanisms controlling root rot disease in alfalfa and potentially other legume crops.   
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Straw return and appropriate tillage method improve grain yield and nitrogen efficiency of winter wheat
CHEN Jin, ZHENG Meng-jing, PANG Dang-wei, YIN Yan-ping, HAN Ming-ming, LI Yan-xia, LUO Yong-li, XU Xu, LI Yong, WANG Zhen-lin
2017, 16 (08): 1708-1719.   DOI: 10.1016/S2095-3119(16)61589-7
Abstract1015)      PDF in ScienceDirect      
   Straw return is an important management tool for tackling and promoting soil nutrient conservation and improving crop yield in Huang-Huai-Hai Plain, China. Although the incorporation of maize straw with deep plowing and rotary tillage practices are widespread in the region, only few studies have focused on rotation tillage. To determine the effects of maize straw return on the nitrogen (N) efficiency and grain yield of winter wheat (Triticum aestivum L.), we conducted experiments in this region for 3 years. Five treatments were tested: (i) rotary tillage without straw return (RT); (ii) deep plowing tillage without straw return (DT); (iii) rotary tillage with total straw return (RS); (iv) deep plowing tillage with total straw return (DS); (v) rotary tillage of 2 years and deep plowing tillage in the 3rd year with total straw return (TS). Treatments with straw return increased kernels no. ear–1, thousand-kernel weight (TKW), grain yields, ratio of dry matter accumulation post-anthesis, and nitrogen (N) efficiency whereas reduced the ears no. ha–1 in the 2011–2012 and 2012–2013 growing seasons. Compared with the rotary tillage, deep plowing tillage significantly increased the grain yield, yield components, total dry matter accumulation, and N efficiency in 2013–2014. RS had significantly higher straw N distribution, soil inorganic nitrogen content, and soil enzymes activities in the 0–10 cm soil layer compared with the DS and TS. However, significantly lower values were observed in the 10–20 and 20–30 cm soil layers. TS obtained approximately equal grain yield as DS, and it also reduced the resource costs. Therefore, we conclude that TS is the most economical method for increasing grain yield and N efficiency of winter wheat in Huang-Huai-Hai Plain.
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Automated detection and identification of white-backed planthoppers in paddy fields using image processing
YAO Qing, CHEN Guo-te, WANG Zheng, ZHANG Chao1 YANG Bao-jun, TANG Jian
2017, 16 (07): 1547-1557.   DOI: 10.1016/S2095-3119(16)61497-1
Abstract837)      PDF in ScienceDirect      
    A survey of the population densities of rice planthoppers is important for forecasting decisions and efficient control. Traditional manual surveying of rice planthoppers is time-consuming, fatiguing, and subjective. A new three-layer detection method was proposed to detect and identify white-backed planthoppers (WBPHs, Sogatella furcifera (Horváth)) and their developmental stages using image processing. In the first two detection layers, we used an AdaBoost classifier that was trained on a histogram of oriented gradient (HOG) features and a support vector machine (SVM) classifier that was trained on Gabor and Local Binary Pattern (LBP) features to detect WBPHs and remove impurities. We achieved a detection rate of 85.6% and a false detection rate of 10.2%. In the third detection layer, a SVM classifier that was trained on the HOG features was used to identify the different developmental stages of the WBPHs, and we achieved an identification rate of 73.1%, a false identification rate of 23.3%, and a 5.6% false detection rate for the images without WBPHs. The proposed three-layer detection method is feasible and effective for the identification of different developmental stages of planthoppers on rice plants in paddy fields.
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Fine mapping of powdery mildew resistance gene PmTm4 in wheat using comparative genomics
XIE Jing-zhong, WANG Li-li, WANG Yong, ZHANG Huai-zhi, ZHOU Sheng-hui, WU Qiu-hong, CHEN Yong-xing, WANG Zhen-zhong, WANG Guo-xin, ZHANG De-yun, ZHANG Yan, HU Tie-zhu, LIU Zhi-yong
2017, 16 (03): 540-550.   DOI: 10.1016/S2095-3119(16)61377-1
Abstract1388)      PDF in ScienceDirect      
Powdery mildew, caused by Blumeria graminis f. sp. tritici, is one of the most severe wheat diseases.  Mining powdery mildew resistance genes in wheat cultivars and their appliance in breeding program is a promising way to control this disease.  Genetic analysis revealed that a single dominant resistance gene named PmTm4 originated from Chinese wheat line Tangmai 4 confers resistance to prevailing isolates of B. graminis f. sp. tritici isolate E09.  Detailed comparative genomics analyses helped to develop closely linked markers to PmTm4 and a fine genetic map was constructed using large F2 population, in which PmTm4 was located into a 0.66-cM genetic interval.  The orthologous subgenome region of PmTm4 in Aegilops tauschii was identified, and two resistance gene analogs (RGA) were characterized from the corresponding sequence scaffolds of Ae. tauschii draft assembly.  The closely linked markers and identified Ae. tauschii orthologs in the mapping interval provide an entry point for chromosome landing and map-based cloning of PmTm4.
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QTL mapping revealed TaVp-1A conferred pre-harvest sprouting resistance in wheat population Yanda 1817×Beinong 6
ZHOU Sheng-hui, FU Lin, WU Qiu-hong, CHEN Jiao-jiao, CHEN Yong-xing, XIE Jing-zhong, WANG Zhen-zhong, WANG Guo-xin, ZHANG De-yun, LIANG Yong, ZHANG Yan, OU Ming-shan, LIANG Rong-qi, HAN Jun, LIU Zhi-yong
2017, 16 (02): 435-444.   DOI: 10.1016/S2095-3119(16)61361-8
Abstract1241)      PDF in ScienceDirect      
Pre-harvest sprouting (PHS) occurs frequently in most of the wheat cultivation area worldwide, which severely reduces yield and end-use quality, resulting in substantial economic loss.  In this study, quantitative trait loci (QTL) for PHS resistance were mapped using an available high-density single nucleotide polymorphism (SNP) and simple sequence repeat (SSR) genetic linkage map developed from a 269 recombinant inbred lines (RILs) population of Yanda 1817×Beinong 6.  Using phenotypic data on two locations (Beijing and Shijiazhuang, China) in two years (2012 and 2013 harvesting seasons), five QTLs, designated as QPhs.cau-3A.1, QPhs.cau-3A.2, QPhs.cau-5B, QPhs.cau-4A, and QPhs.cau-6A, for PHS (GP) were detected by inclusive composite interval mapping (ICIM) (LOD≥2.5).  Two major QTLs, QPhs.cau-3A.2 and QPhs.cau-5B, were mapped on 3AL and 5BS chromosome arms, explaining 6.29–21.65% and 4.36–5.94% of the phenotypic variance, respectively.  Precise mapping and comparative genomic analysis revealed that the TaVp-1A flanking region on 3AL is responsible for QPhs.cau-3A.2.  SNP markers flanking QPhs.cau-3A.2 genomic region were developed and could be used for introgression of PHS tolerance into high yielding wheat varieties through marker-assisted selection (MAS).
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Validation of qGS10, a quantitative trait locus for grain size on the long arm of chromosome 10 in rice (Oryza sativa L.)
WANG Zhen, CHEN Jun-yu, ZHU Yu-jun, FAN Ye-yang, ZHUANG Jie-yun
2017, 16 (01): 16-26.   DOI: 10.1016/S2095-3119(16)61410-7
Abstract1181)      PDF in ScienceDirect      
Grain size is a major determinant of grain weight and a trait having important impact on grain quality in rice. The objective of this study is to detect QTLs for grain size in rice and identify important QTLs that have not been well characterized before. The QTL mapping was first performed using three recombinant inbred line populations derived from indica rice crosses Teqing/IRBB lines, Zhenshan 97/Milyang 46, Xieqingzao/Milyang 46. Fourteen QTLs for grain length and 10 QTLs for grain width were detected, including seven shared by two populations and 17 found in one population. Three of the seven common QTLs were found to coincide in position with those that have been cloned and the four others remained to be clarified. One of them, qGS10 located in the interval RM6100–RM228 on the long arm of chromosome 10, was validated using F2:3 populations and near isogenic lines derived from residual heterozygotes for the interval RM6100–RM228. The QTL was found to have a considerable effect on grain size and grain weight, and a small effect on grain number. This region was also previously detected for quality traits in rice in a number of studies, providing a good candidate for functional analysis and breeding utilization.
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Foliar application of sodium hydrosulfide (NaHS), a hydrogen sulfide (H2S) donor, can protect seedlings against heat stress in wheat (Triticum aestivum L.)
YANG Min, QIN Bao-ping, MA Xue-li, WANG Ping, LI Mei-ling, CHEN Lu-lu, CHEN Lei-tai, SUN Aiqing, WANG Zhen-lin, YIN Yan-ping
2016, 15 (12): 2745-2758.   DOI: 10.1016/S2095-3119(16)61358-8
Abstract1312)      PDF in ScienceDirect      
    Temperature extremes represent an important limiting factor to plant growth and productivity. Low concentration of hydrogen sulfide (H2S) has been proven to function in physiological responses to various stresses. The present study evaluated the effect of foliar application of wheat seedlings with a H2S donor, sodium hydrosulfide (NaHS), on the response to acute heat stress. The results showed that pretreatment with NaHS could promote heat tolerance of wheat seedlings in a dose-dependent manner. Again, it was verified that H2S, rather than other sulfur-containing components or sodion derived from NaHS solution, should contribute to the positive role in promoting wheat seedlings against heat stress. To further study antioxidant mechanisms of NaHS-induced heat tolerance, superoxide dismutase (SOD, EC 1.15.1.1), catalase (CAT, EC 1.11.1.6) and ascorbate peroxidase (APX, EC 1.11.1.11) activities, and H2S, hydrogen peroxide (H2O2), malonaldehyde (MDA), and soluble sugar contents in wheat seedlings were determined. The results showed that, under heat stress, the activities of SOD, CAT, and APX, H2S, H2O2, MDA, and soluble sugar contents in NaHS-pretreated seedlings and its control all increased. Meanwhile, NaHS-pretreated seedlings showed higher antioxidant enzymes activities and gene expression levels as well as the H2S and soluble sugar levels, and lower H2O2, MDA contents induced by heat stress. While little effect was detected in antioxidant enzymes activities and soluble substances contents in pretreated wheat seedlings compared with its control under normal culture conditions (data not shown). All of our results suggested that exogenous NaHS could alleviate oxidative damage and improve heat tolerance by regulating the antioxidant system in wheat seedlings under heat stress.
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Screening of a microbial consortium with efficient corn stover degradation ability at low temperature
Qinggeer , GAO Ju-lin, YU Xiao-fang, ZHANG Bao-lin, WANG Zhi-gang, Borjigin Naoganchaolu, HU Shu-ping, SUN Ji-ying, XIE Min, WANG Zhen
2016, 15 (10): 2369-2379.   DOI: 10.1016/S2095-3119(15)61272-2
Abstract1442)           
    To speed up the degradation of corn stover directly returned to soil at low temperature, the corn stover-degrading microbial consortium GF-20, acclimated to biological decomposition in the frigid region, was successfully constructed under a long-term limiting substrate. To evaluate its potential in accelerating the decomposition of un-pretreated corn stover, the decomposing property, fermentation dynamic and the microbial diversity were analyzed. GF-20 degraded corn stover by 32% after 15-day fermentation at 10°C. Peak activities of filter paperlyase (FPA), β-glucosidases (CB), endoglucanases (Cx), and cellobiohydrolases (C1) were 1.15, 1.67, 1.73, and 1.42 U mL–1, appearing at the 6th, 3rd, 11th, and 9th d, respectively. The pH averaged at 6.73–8.42, and the optical density (OD) value peaked at 1.87 at the 120 h of the degradation process. Cellulase, hemicellulase and lignin in corn stover were persistently degraded by 44.85, 43.85 and 25.29% at the end of incubation. Result of denaturing gradient gel electrophoresis (DGGE) profiles demonstrated that GF-20 had a stable component structure under switching the temperature and pH. The composition of the GF-20 was also analyzed by constructing bacterial 16S rDNA clone library and fungal 18SrDNA-PCR-DGGE. Twenty-two bacterial clones and four fungal bands were detected and identified dominant bacteria represented by Cellvibrio mixtus subsp., Azospira oryzae, Arcobacter defluyii, and Clostridium populeti and the fungi were mainly identified as related to Trichosporon sp.
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Overexpression of vacuolar proton pump ATPase (V-H+-ATPase) subunits B, C and H confers tolerance to salt and saline-alkali stresses in transgenic alfalfa (Medicago sativa L.)
WANG Fa-wei, WANG Chao, SUN Yao, WANG Nan, LI Xiao-wei, DONG Yuan-yuan, Yao Na, Liu Xiu-ming, CHEN Huan, CHEN Xi-feng, WANG Zhen-min, LI Hai-yan
2016, 15 (10): 2279-2289.   DOI: 10.1016/S2095-3119(16)61399-0
Abstract1601)      PDF in ScienceDirect      
    The vacuolar proton pump ATPase (V-H+-ATPase), which is a multi-subunit membrane protein complex, plays a major role in the activation of ion and nutrient transport and has been suggested to be involved in several physiological processes, such as cell expansion and salt tolerance. In this study, three genes encoding V-H+-ATPase subunits B (ScVHA-B, GenBank: JF826506), C (ScVHA-C, GenBank: JF826507) and H (ScVHA-H, GenBank: JF826508) were isolated from the halophyte Suaeda corniculata. The transcript levels of ScVHA-B, ScVHA-C and ScVHA-H were increased by salt, drought and saline-alkali treatments. V-H+-ATPase activity was also examined under salt, drought and saline-alkali stresses. The results showed that V-H+-ATPase activity was correlated with salt, drought and saline-alkali stress. Furthermore, V-H+-ATPase subunits B, C and H (ScVHA-B, ScVHA-C and ScVHA-H) from S. corniculata were introduced separately into the alfalfa genome. The transgenic alfalfa was verified by Southern and Northern blot analysis. During salt and saline-alkali stresses, transgenic linevacuolar proton pump, salt tolerance, saline-alkali tolerance, alfalfa
s carrying the B, C and H subunits had higher germination rates than the wild type (WT). More free proline, higher superoxide dismutase (SOD) activity and lower malondialdehyde (MDA) levels were detected in the transgenic plants under salt and saline-alkali treatments. Moreover, the ScVHA-B transgenic lines showed greater tolerance to salt and saline-alkali stresses than the WT. These results suggest that overexpression of ScVHA-B, ScVHA-C and ScVHA-H improves tolerance to salt and saline-alkali stresses in transgenic alfalfa.
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