|
Ashraf M, Wu L. 1994. Breeding for salinity tolerance in plants. Critical Reviews in Plant Sciences, 1, 17–42.
Bakopoulos D, Whisstock J C, Johnson T K. 2019. Control of growth factor signalling by MACPF proteins. Biochemical Society Transactions, 47, 801–810.
Cao Y, Zhang X, Jia S, Karikari B, Zhang M, Xia Z, Zhao T, Liang F. 2021. Genome-wide association among soybean accessions for the genetic basis of salinity–alkalinity tolerance during germination. Crop & Pasture Science, 72, 255–267.
Che Z, Liu H, Yi F, Cheng H, Yang Y, Wang L, Du J, Zhang P, Wang J, Yu D. 2017. Genome-wide association study reveals novel loci for SC7 resistance in a soybean mutant panel. Frontiers in Plant Science, 8, 12.
Chen P, Jian H, Wei F, Gu L, Hu T, Lv X, Guo X, Lu J, Ma L, Wang H, Wu A, Mao G, Yu S, Wei H. 2021. Phylogenetic analysis of the membrane attack complex/perforin domain-containing proteins in Gossypium and the role of GhMACPF26 in cotton under cold stress. Frontiers in Plant Science, 12, 684227.
Clough S J, Bent A F. 1998. Floral dip: A simplified method for agrobacterium-mediated transformation of Arabidopsis thaliana. Plant Journal, 16, 735–743.
Dhaliwal A K, Mohan A, Sidhu G, Maqbool R, Gill K S. 2015. An ethylmethane sulfonate mutant resource in pre-green revolution hexaploid wheat. PLoS ONE, 10, 15.
Fang H, Fu X, Ge H, Jia M, Ji J, Zhao Y, Qu Z, Cui Z, Zhang A, Wang Y, Li P, Wang B. 2024. Genetic analysis and candidate gene identification of salt tolerance-related traits in maize. Journal of Integrative Agriculture, 23, 2196–2210.
Fang Y, Xie K, Hou X, Hu H, Xiong L. 2010. Systematic analysis of gt factor family of rice reveals a novel subfamily involved in stress responses. Molecular Genetics and Genomics, 283, 157–169.
FAO (Food and Agriculture Organization of the United Nations). 2024. Global Status of Salt-affected Soils–Main Report. FAO, Rome, Italy.
Fu X, Wang J, Shangguan T, Wu R, Li S, Chen G, Xu S. 2022. Smxls regulate seed germination under salinity and drought stress in soybean. Plant Growth Regulation, 96, 397–408.
Gai J, Xia J, Cui Z, Ren Z, Pu F, Ji D. 1989. A study on resistance of soybean from southern china to soybean agromyzid fly (Melanagromyza sojae zehntner). Soybean Science, 8, 115–121. (in Chinese)
Gaut B S, Díez C M, Morrell P L. 2015. Genomics and the contrasting dynamics of annual and perennial domestication. Trends in Genetics, 31, 709–719.
Han S, Yang M, Chen Y, Yu J, Zhao T, Gai J, Yu D. 2008. Construction of mutant library for soybean “Nannong 94-16” and analysis of some characters. Acta Agriculturae Nucleatae Sinica, 2, 131–135. (in Chinese)
Han S, Zhang H, Yang M, Zhao T, Gai J, Yu D. 2007. Screening of mutants and construction of mutant population in soy bean “Nannong 86-4”. Acta Agronomica Sinica, 12, 2059–2062. (in Chinese)
Hassani A, Azapagic A, Shokri N. 2020. Predicting long-term dynamics of soil salinity and sodicity on a global scale. Proceedings of the National Academy of Sciences of the United States of America, 117, 33017–33027.
He Z, Zhou J, Li S, Zhang Y, Shen L, Liu S, Tang K H D, Wang T, Zhu L. 2025. Molecular mechanisms underlying the impacts of available-iron levels on the accumulation and translocation of 6:2 chlorinated polyfluoroalkyl ether sulfonate in soybean (Glycine max L. Merrill). Environmental Science & Technology, 59, 7268–7277.
Hyten D L, Song Q, Zhu Y, Choi I, Nelson R L, Costa J M, Specht J E, Shoemaker R C, Cregan P B. 2006. Impacts of genetic bottlenecks on soybean genome diversity. Proceedings of the National Academy of Sciences of the United States of America, 103, 16666–16671.
Hong Y, Pan X, Welti R, Wang X. 2008a. Phospholipase dalpha3 is involved in the hyperosmotic response in Arabidopsis. Plant Cell, 20, 803–816.
Hong Y, Zheng S, Wang X. 2008b. Dual functions of phospholipase Dα1 in plant response to drought. Molecular Plant, 1, 262–269.
Ismail A M, Horie T. 2017. Genomics, physiology, and molecular breeding approaches for improving salt tolerance. Annual Review of Plant Biology, 68, 405–434.
Janicka M G, Reda M G, Czyewska K, Kaba A K. 2018. Involvement of signalling molecules NO, H2O2 and H2S in modification of plasma membrane proton pump in cucumber roots subjected to salt or low temperature stress. Functional Plant Biology, 45, 428–439.
Murata J, Takase H, Hiratsuka K. 2002. Characterization of a novel GT-box binding protein from Arabidopsis. Plant Biotechnology, 2, 103–112.
Kan G, Zhang W, Yang W, Ma D, Zhang D, Hao D, Hu Z, Yu D. 2015. Association mapping of soybean seed germination under salt stress. Molecular Genetics and Genomics, 290, 2147–2162.
Li J, Pu L, Han M, Zhu M, Zhang R, Xiang Y. 2014. Soil salinization research in China: Advances and prospects. Journal of Geographical Sciences, 24, 943–960.
Li Y, Li W, Zhang C, Yang L, Chang R, Gaut B S, Qiu L. 2010. Genetic diversity in domesticated soybean (Glycine max) and its wild progenitor (Glycine soja) for simple sequence repeat and single-nucleotide polymorphism loci. New Phytologist, 188, 242–253.
Li Z, Jiang L, Ma Y, Wei Z, Hong H, Liu Z, Lei J, Liu Y, Guan R, Guo Y, Jin L, Zhang L, Li Y, Ren Y, He W, Liu M, Htwe N M P S, Liu L, Guo B, Song J, et al. 2017. Development and utilization of a new chemically-induced soybean library with a high mutation density. Journal of Integrative Plant Biology, 59, 60–74.
Lipka A E, Tian F, Wang Q, Peiffer J, Li M, Bradbury P J, Gore M A, Buckler E S, Zhang Z. 2012. Gapit: Genome association and prediction integrated tool. Bioinformatics, 28, 2397–2399.
Liu C, Tian L, Yu W, Wang Y, Yao Z, Liu Y, Yang L, Liu C, Shi X, Liu T, Chen B, Wang Z, Yu H, Zhou Y. 2025. Natural variation in SbTEF1 contributes to salt tolerance in sorghum seedlings. Journal of Integrative Agriculture, 24, 4168–4181.
Liu X, Wu D, Shan T, Xu S, Qin R, Li H, Negm M, Wu D, Li J. 2020. The trihelix transcription factor osgtgamma-2 is involved adaption to salt stress in rice. Plant Molecular Biology, 103, 545–560.
Livak K J, Schmittgen T D. 2001. Analysis of relative gene expression data using real-time quantitative pcr and the 2-ΔΔCt method. Methods, 25, 402–408.
Lu X, Zuo Q, Huda M N, Shi Y, Li G, Wang X, Xiao Y, Khurshid M, Jahan T, Dhami N, Gauchan D P, Ali M A, Cheng J, Meng Y, Ruan J, Zhou M. 2025. Genome-wide association analysis locates FtAUR3 in tartary buckwheat that contributes to enhance plant salt resistance. Journal of Integrative Agriculture, 24, 4515–4527.
Merk H L, Yarnes S C, Van Deynze A, Tong N, Menda N, Mueller L A, Mutschler M A, Loewen S A, Myers J R, Francis D M. 2012. Trait diversity and potential for selection indices based on variation among regionally adapted processing tomato germplasm. Journal of the American Society for Horticultural Science, 137, 427–437.
Mustafa G, Akhtar M S, Abdullah R. 2019. Global concern for salinity on various agro-ecosystems. In: Akhtar M S, ed., Salt Stress, Microbes, and Plant Interactions: Causes and Solution: volume 1. Springer Singapore, Singapore. pp. 1–19.
Segura V, Vilhjalmsson B J, Platt A, Korte A, Seren U, Long Q, Nordborg M. 2012. An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations. Nature Genetics, 44, 144–825.
Shah S, Xin Z G, Browse J. 1997. Overexpression of the fad3 desaturase gene in a mutant of Arabidopsis. Plant Physiology (Bethesda), 114, 1533–1539.
Shi M, Liao X, Ye Q, Zhang W, Li Y, Bhat J A, Kan G, Yu D. 2022. Linkage and association mapping of wild soybean (Glycine soja) seeds germinating under salt stress. Journal of Integrative Agriculture, 21, 2833–2847.
Sun J, Qiu C, Ding Y, Wang Y, Sun L, Fan K, Gai Z, Dong G, Wang J, Li X, Song L, Ding Z. 2020. Fulvic acid ameliorates drought stress-induced damage in tea plants by regulating the ascorbate metabolism and flavonoids biosynthesis. BMC Genomics, 21, 411.
Tuyen D D, Lal S K, Xu D H. 2010. Identification of a major QTL allele from wild soybean (Glycine soja sieb. & zucc.) for increasing alkaline salt tolerance in soybean. Theoretical and Applied Genetics, 121, 229–236.
Upchurch R G. 2008. Fatty acid unsaturation, mobilization, and regulation in the response of plants to stress. Biotechnology Letters, 30, 967–977.
Wang J, Chu S, Zhang H, Zhu Y, Cheng H, Yu D. 2016. Development and application of a novel genome-wide SNP array reveals domestication history in soybean. Scientific Reports, 6, 10.
Wang J, Zhou M, Zhang H, Liu X, Zhang W, Wang Q, Jia Q, Xu D, Chen H, Su C. 2024. A genome-wide association analysis for salt tolerance during the soybean germination stage and development of kasp markers. Frontiers in Plant Science, 15, 1352465.
Wang L, Ding X, Gao Y, Yang S. 2020. Genome-wide identification and characterization of gras genes in soybean (Glycine max). BMC Plant Biology, 20, 415.
Wang L, Yang X, Gao Y, Yang S. 2021. Genome-wide identification and characterization of tale superfamily genes in soybean (Glycine max L.). International Journal of Molecular Sciences, 22, 4117.
Wang S, Liu S, Wang J, Yokosho K, Zhou B, Yu Y, Liu Z, Frommer W B, Ma J F, Chen L, Guan Y, Shou H, Tian Z. 2020. Simultaneous changes in seed size, oil content and protein content driven by selection of sweet homologues during soybean domestication. National Science Review, 7, 1776–1786.
Xie Z, Zou H, Lei G, Wei W, Zhou Q, Niu C, Liao Y, Tian A, Ma B, Zhang W, Zhang J, Chen S. 2009. Soybean trihelix transcription factors gmgt-2a and gmgt-2b improve plant tolerance to abiotic stresses in transgenic Arabidopsis. PLoS ONE, 4, e6898.
Xu D, Tuyen D D. 2012. Genetic studies on saline and sodic tolerances in soybean. Breeding Science, 61, 559–565.
Yan F, Wei H, Ding Y, Li W, Liu Z, Chen L, Tang S, Ding C, Jiang Y, Li G. 2021. Melatonin regulates antioxidant strategy in response to continuous salt stress in rice seedlings. Plant Physiology and Biochemistry, 165, 239–250.
Yang R, Ma Y, Yang Z, Pu Y, Liu M, Du J, Xu Z, Xu Z, Zhang S, Zhang H, Zhang W, Yu D, Kan G. 2024. Knockdown of beta-conglycinin alpha’ and alpha subunits alters seed protein composition and improves salt tolerance in soybean. Plant Journal, 120, 1488–1507.
Yu L, Liu D, Chen S, Dai Y, Guo W, Zhang X, Wang L, Ma S, Xiao M, Qi H, Xiao S, Chen Q. 2020. Evolution and expression of the membrane attack complex and perforin gene family in the poaceae. International Journal of Molecular Sciences, 21, 5736.
Yuan W, Wu Z, Zhang Y E, Yang R, Wang H, Kan G, Yu D. 2021. Genome-wide association studies for sulfur-containing amino acids in soybean seeds. Euphytica, 217, 155.
Zabrouskov V, Kumar G M, Spychalla J P, Knowles N R. 2002. Oxidative metabolism and the physiological age of seed potatoes are affected by increased alpha-linolenate content. Physiologia Plantarum, 116, 172–185.
Zhang M, Zhang X, Jiang X, Qiu L, Jia G, Wang L, Ye W, Song Q. 2022. Isoybean: A database for the mutational fingerprints of soybean. Plant Biotechnology Journal, 20, 1435–1437.
Zhang W, Liao X, Cui Y, Ma W, Zhang X, Du H, Ma Y, Ning L, Wang H, Huang F, Yang H, Kan G, Yu D. 2019. A cation diffusion facilitator, GmCDF1, negatively regulates salt tolerance in soybean. PLoS Genetics, 15, e1007798.
Zhang W, Niu Y, Bu S, Li M, Feng J, Zhang J, Yang S, Odinga M M, Wei S, Liu X, Zhang Y. 2014. Epistatic association mapping for alkaline and salinity tolerance traits in the soybean germination stage. PLoS ONE, 9, e84750.
Zhang X, Liu J, Li S, Chen J, Lin Y, Pu Y, Yan Q, Wu R, Yuan N, Somta P, Wang L, Chen X, Yuan X. 2025. Novel role of VrPG1 in salt-tolerant germination of mungbean revealed by genome-wide association study. Journal of Integrative Agriculture, doi: 10.1016/j.jia.2025.10.009.
Zhao J, Wang C, Bedair M, Welti R, Sumner L W, Baxter I, Wang X. 2011. Suppression of phospholipase dgammas confers increased aluminum resistance in Arabidopsis thaliana. PLoS ONE, 6, e28086.
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