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Journal of Integrative Agriculture  2016, Vol. 15 Issue (1): 120-134    DOI: 10.1016/S2095-3119(14)61003-0
Special Issue: 线虫合辑Nematology
Plant Protection Advanced Online Publication | Current Issue | Archive | Adv Search |
Parasitism and pathogenicity of Radopholus similis to Ipomoea aquatica, Basella rubra and Cucurbita moschata and genetic diversity of different populations
 LI Yu, WANG Ke, XIE Hui, XU Chun-ling, WANG Dong-wei, LI Jing, HUANG Xin, PENG Xiao-fang
Laboratory of Plant Nematology and Research Center of Nematodes of Plant Quarantine, Department of Plant Pathology, South China Agricultural University, Guangzhou 510642, P.R.China
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摘要  Ten populations of Radopholus similis from different ornamental hosts were tested for their parasitism and pathogenicity to water spinach (Ipomoea aquatic), malabar spinach (Basella rubra), and squash (Cucurbita moschata) in pots. The results showed all three plants were new hosts of R. similis. Growth parameters of plants inoculated with nematodes were significantly lower than those of healthy control plants. All R. similis populations were pathogenic to the three plants, but pathogenicity differed among populations from different hosts. The same R. similis populations also showed different pathogenic effects in the three different plants. RadN5 population from Anthurium andraeanum had the highest pathogenicity to the three studied plants. RadN1 from A. andraeanum had the lowest pathogenicity to squash and RadN7 from Chrysalidocarpus lutesens had the lowest pathogenicity to water spinach and malabar spinach. R. similis is usually associated with root tissues, but here we report that it could be found to move and feed in the stem bases of all three studied plants. Sequence and phylogenetic analyses of DNA markers of the 18S rRNA, 28S rRNA, ITS rRNA, and mitochondrial DNA gene sequences of ten R. similis populations revealed significant genetic diversity. RadN5 and RadN6 populations from anthurium showed a close genetic relationship and could be distinguished from other populations by PCR-RFLP. At the same time, RadN5 and RadN6 populations were the most pathogenic to three studied plants. These results confirm the existence of large biological variability and molecular diversity among R. similis populations from the same or different hosts, and these characteristics are related to pathogenic variability.

Abstract  Ten populations of Radopholus similis from different ornamental hosts were tested for their parasitism and pathogenicity to water spinach (Ipomoea aquatic), malabar spinach (Basella rubra), and squash (Cucurbita moschata) in pots. The results showed all three plants were new hosts of R. similis. Growth parameters of plants inoculated with nematodes were significantly lower than those of healthy control plants. All R. similis populations were pathogenic to the three plants, but pathogenicity differed among populations from different hosts. The same R. similis populations also showed different pathogenic effects in the three different plants. RadN5 population from Anthurium andraeanum had the highest pathogenicity to the three studied plants. RadN1 from A. andraeanum had the lowest pathogenicity to squash and RadN7 from Chrysalidocarpus lutesens had the lowest pathogenicity to water spinach and malabar spinach. R. similis is usually associated with root tissues, but here we report that it could be found to move and feed in the stem bases of all three studied plants. Sequence and phylogenetic analyses of DNA markers of the 18S rRNA, 28S rRNA, ITS rRNA, and mitochondrial DNA gene sequences of ten R. similis populations revealed significant genetic diversity. RadN5 and RadN6 populations from anthurium showed a close genetic relationship and could be distinguished from other populations by PCR-RFLP. At the same time, RadN5 and RadN6 populations were the most pathogenic to three studied plants. These results confirm the existence of large biological variability and molecular diversity among R. similis populations from the same or different hosts, and these characteristics are related to pathogenic variability.
Keywords:  burrowing nematode       parasitism       pathogenicity       genetic diversity       PCR-RFLP  
Received: 18 November 2014   Accepted:
Fund: 

This work was funded by the National Natural Science Foundation of China (31071665) and the Special Fund for Agro-Scientific Research in the Public Interest, China (200903040).

Corresponding Authors:  XIE Hui, Tel: +86-20-38297286,E-mail: xiehui@scau.edu.cn     E-mail:  xiehui@scau.edu.cn
About author:  LI Yu, Tel: +86-20-38297432, E-mail: limiao04@163.com;

Cite this article: 

LI Yu, WANG Ke, XIE Hui, XU Chun-ling, WANG Dong-wei, LI Jing, HUANG Xin, PENG Xiao-fang. 2016. Parasitism and pathogenicity of Radopholus similis to Ipomoea aquatica, Basella rubra and Cucurbita moschata and genetic diversity of different populations. Journal of Integrative Agriculture, 15(1): 120-134.

Bybd D W, Kirkpatrick T, Barker K R. 1983. An improvedtechnique for clearing and staining plant tissues for detectionof nematodes. Journal of Nematology, 15, 142-143

Castagnone-Sereno P. 2002. Genetic variability of nematodes:A threat to the durability of plant resistance genes?Euphytica, 124, 193-199

Chen Y, Wang H Y. 2002. Identification of Radopholus similisinfecting Anthurium andreaeorium. Plant Quarantine, 16,78-80 (in Chinese)

Cotton J, Van Riel H. 1993. Quarantine: Problems andSolutions. In: Evans K, Trudgill D L, Webster J M, eds.,Plant Parasitic Nematodes in Temperate Agriculture. CABIPublishing, UK. pp. 593-607

Elbadri G A, De Ley P, Waeyenberge L, Vierstraete A, MoensM, Vanfleteren J. 2002. Intraspecific variation in Radopholussimilis isolates assessed with restriction fragment lengthpolymorphism and DNA sequencing of the internaltranscribed spacer region of the ribosomal RNA cistron.International Journal for Parasitology, 32, 199-205

El-Borai F E, Duncan L W. 2005. Nematode parasites ofsubtropical and tropical fruit tree crops. In: Luc M, Sikora RA, Bridge J, eds., Plant Parasitic Nematodes in Subtropicaland Tropical Agriculture. CABI Publishing, UK. pp. 467-482

Fallas G A, Sarah J L. 1994. Effect of storage temperature onthe in vitro reproduction of Radopholus similis. Nematropica,24, 175-177

Felsenstein J. 1985. Confidence limits on phylogenies: Anapproach using the bootstrap. Evolution, 39, 783-791

Fu M Y, Wu F Z, Bu X L, Wang H F, Chen M C. 2011.Determination of pathogenicity of 5 populations ofRadopholous similis to 3 banana cultivars. South ChinaFruits, 40, 9-10, 23 (in Chinese)

Goo M Y C, Sipes B S. 1997. Host preference of Radopholuscitrophilus from Hawaiian anthurium among selectedtropical ornamentals. HortScience, 32, 1237-1238

Gowen S R, Quénéhervé P, Fogain R. 2005. Nematodeparasites of bananas and plantains. In: Luc M, Sikora R A,Bridge J, eds., Plant Parasitic Nematodes in Subtropicaland Tropical Agriculture. CABI Publishing, UK. pp. 615-617

Griffith R, Giblin-Davis R M, Koshy P K, Sosamma V K. 2005.Nematode parasites of coconut and other palms. In: LucM, Sikora R A, Bridge J, eds., Plant Parasitic Nematodesin Subtropical and Tropical Agriculture. CABI Publishing,UK. pp. 365-366

Gutiérrez-Gutiérrez C, Cantalapiedra-Navarrete C, DecraemerW, Vovlas N, Prior T, Rius J E P, Castillo P. 2012.Phylogeny, diversity, and species delimitation in somespecies of the Xiphinema americanum-group complex(Nematoda: Longidoridae), as inferred from nuclear andmitochondrial DNA sequences and morphology. EuropeanJournal of Plant Pathology, 134, 561-597

Hahn M L, Sarah J L, Boisseau M, Vines N J, Wright D J,Burrows P R. 1996. Reproductive fitness and pathogenicityof selected Radopholus populations on two bananacultivars. Plant Pathology, 45, 1-9

Han Y C, Huang C X, Qin D, Xie H. 2009a. Pathogenicityof Radopholus similis populations from ornamentals toZingiber officinale and Saccharum officinarum. Journal ofHuazhong Agricultural University, 28, 546-550 (in Chinese)

Han Y C, Xie H, Qin D, Huang C X. 2009b. Parasitism andpathogenicity of Radopholus similis to Nicotiana tabacumand Mangifera indica. Scientia Agricultura Sinica, 42,130-135 (in Chinese)

Hooper D J, Hallmann J, Subbotin S A. 2005. Methods forextraction, processing and detection of plant and soilnematodes. In: Luc M, Sikora R A, Bridge J, eds., PlantParasitic Nematodes in Subtropical and Tropical Agriculture.CABI Publishing, UK. pp. 60-61

Huang F Y, Liang Q C, Zou H W, Xu B D. 2001. Radopholussimilis was intercepted from the anthurium of Korea. PlantQuarantine, 15, 164. (in Chinese)Hugall A, Stanton J, Moritz C. 1999. Reticulate evolution andthe origins of ribosomal internal transcribed spacer diversityin apomictic Meloidogyne. Molecular Biology and Evolution,16, 157-164

Jasy T, Koshy P K. 1992. Pathogenicity of the burrowingnematode, Radopholus similis, on avocado. Indian Journalof Nematology, 22, 122-124

Kaplan D T. 1994. An assay to estimate citrus rootstockresistance to burrowing nematodes. Proceedings of theFlorida State Horticultural Society, 107, 85-89

Koshy P K, Jasy T. 1991. Host preference of the burrowingnematode, Radopholus similis populations from India.Indian Journal of Nematology, 21, 39-51

Liu X B, Cai J M, Huang G X. 2007. Identification of Radopholussimilis on anthurium in Hainan. Chinese Journal of TropicalAgriculture, 27, 20-23 (in Chinese)

McClure M A, Nischwitz C, Skantar A M, Schmitt M E, SubbotinS A. 2012. Root-knot nematodes in golf course greens ofthe western United States. Plant Disease, 96, 635-647

Milne D L, Keetch, D P. 1976. Some observations on thehost plant relationships of Radopholus similis in Natal.Nematropica, 6, 13-17

 Mizukubo T, Orui Y, Hanada K, Sano Z. 2003. Microevolutionarytrend in Pratylenchus coffeae sensu strictu (Nematoda:Pratylenchidae): The diversity in PCR-RFLP phenotype,compatibility on host plants and reproductive segregation.Japanese Journal of Nematology, 33, 57-76

Musabyimana T, Saxena R. 1999. Efficacy of neem seedderivatives against nematodes affecting banana.Phytoparasitica, 27, 43-49

O’Bannon J H. 1977. Worldwide dissemination of Radopholussimilis and its importance in crop production. Journal ofNematology, 9, 16-25

Plowright R, Dusabe J, Coyne D, Speijer P. 2013. Analysisof the pathogenic variability and genetic diversity of theplant-parasitic nematode Radopholus similis on bananas.Nematology, 15, 41-56

Qin D, Xie H, Pei Y Y, Xu C L, Han Y C, Huang C X, Li Y. 2009.Pathogenicity of 6 populations of Radopholus similis fromornamentals to 4 banana cultivars. Scientia AgriculturaSinica, 42, 3898-3903 (in Chinese)

Reise R W, Huettel R N, Sayre R M. 1987. Carrot callustissue for culture of endoparasitic nematodes. Journal ofNematology, 19, 387-389

Richardson P N, Grewal P S. 1993. Nematode pests ofglasshouse crops and mushrooms. In: Evans K, Trudgill D L,Webster J M, eds., Plant Parasitic Nematodes in TemperateAgriculture. CABI Publishing, UK. pp. 515-516

Rzhetsky A, Nei M. 1992. A simple method for estimating andtesting minimum-evolution trees. Molecular Biology andEvolution, 9, 945-967

Salemi M, Vandamme A M. 2003. The Phylogenetic Handbook:A Practical Approach to DNA and Protein Phylogeny.Cambridge University Press, Cambridge.Sarah J L. 1989. Banana nematodes and their control in African.Nematropica, 19, 199-216

Sarah J L, Sabatini C, Boisseau M. 1993. Differences inpathogenicity to banana (Musa sp., cv. poyo) amongisolates of Radopholus similis from different productionareas of the world. Nematropica, 23, 75-79

Sikora R A, Fernández E. 2005. Nematode parasites ofVegetables. In: Luc M, Sikora R A, Bridge J, eds., PlantParasitic Nematodes in Subtropical and Tropical Agriculture.CABI Publishing, UK. pp. 365-366

da Silva E H, da Silva Mattos V, Furlaneto C, Giband M, BarrosoP A V, Moita A W, Jorge-Junior A, Correa V R, Castagnone-Sereno P, Carneiro R M D G. 2014. Genetic variability andvirulence of Meloidogyne incognita populations from Brazilto resistant cotton genotypes. European Journal of PlantPathology, 139, 195-204

Sipes B S, Schmitt D P, Nelson S C. 2001. Burrowing Nematode:A Major Pest in the Tropics. University of Hawaii, CTAHRPlant Disease Publication PD-21, USA.Smith I M, Charles L M F. 1998. Distribution Maps of QuarantinePests for Europe. CABI and EPPO, CABI Publishing, UK.Ssango F, Speijer P R, Coyne D L, De Waele D. 2004. Pathanalysis: A novel approach to determine the contribution ofnematode damage to East African Highlan banana (Musaspp., AAA) yield loss under two crop management practicesin Uganda. Field Crops Research, 90, 177-187

Tajima F, Nei M. 1984. Estimation of evolutionary distancebetween nucleotide sequences. Molecular Biology andEvolution, 1, 269-285

Tamura K, Peterson D, Peterson N, Stecher G, Nei M, KumarS. 2011. MEGA5: Molecular evolutionary genetics analysisusing maximum likelihood, evolutionary distance, andmaximum parsimony methods. Molecular Biology andEvolution, 28, 2731-2739

Tang W, Ding Z, Zhou Z Q, Wang Y Z, Guo L Y. 2012.Phylogenetic and pathogenic analyses show that the causalagent of apple ring rot in China is Botryosphaeria dothidea.Plant Disease, 96, 486-496

Thompson J D, Jeanmougin F, Gibson T J, Plewniak F, HigginsD G. 1997. The CLUSTAL_X windows interface: Flexiblestrategies for multiple sequence alignment aided by qualityanalysis tools. Nucleic Acids Research, 25, 4876-4882

Uchida J Y, Sipes B S, Kadooka C Y. 2003. BurrowingNematode, on Anthurium: Recognizing Symptoms,Understanding the Pathogen and Preventing Disease.University of Hawaii, CTAHR Plant Disease PublicationPD-24, USA

Waeyenberge L, Ryss A, Moens M, Pinochet J, Vrain T C.2000. Molecular characterization of 18 Pratylenchus speciesusing rDNA restriction fragment length polymorphism.Nematology, 2, 135-142

Wang K H, Sipes B S, Kuehnle A R. 1997. Effect of soillessmedia on the growth of Anthurium andreanum infected byRadopholus similis. Nematropica, 27, 77-84

Wei Y J, Li Y, Xie H, Liu Y F, Chen Y L, Ma R. 2010. Parasitismof Radopholus similis to Colocasia gigantea. NematologyResearch in China, 3, 71-77 (in Chiense)

Xu J H, Liu P L, Meng Q P, Long, H. 2004. Characterisation ofMeloidogyne species from China using isozyme phenotypesand amplified mitochondrial DNA restriction fragment lengthpolymorphism. European Journal of Plant Pathology, 110,309-315

Zhang C, Xie H, Xu C L, Cheng X, Li K M, Li Y. 2012. Differentialexpression of Rs-eng-1b in two populations of Radopholussimilis (Tylenchida: Pratylecnchidae) and its relationship topathogenicity. European Journal of Plant Pathology, 133,899-910

Zhang S S, Xie Z C. 2003. Quarantine and diagnosis ofanthurium decline disease. Plant Quarantine, 17, 264-268 (in Chinese)

Zheng X L, Jin X X, Zhang S Q, Xu C L, Xie H. 2011. Identificationand description of Radopholus similis extracted from threeimported ornamental plants. Plant Protection, 37, 95–98.(in Chinese)
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