Scientia Agricultura Sinica ›› 2019, Vol. 52 ›› Issue (16): 2880-2890.doi: 10.3864/j.issn.0578-1752.2019.16.013
• ANIMAL SCIENCE·VETERINARY SCIENCE·RESOURCE INSECT • Previous Articles Next Articles
XU YuanYuan1,HOU LingLing2,JI JieFei1,WANG HuanJie1,LI SiLu1,CHEN Wen1,KANG XiangTao1,HUANG YanQun1(
)
| [1] | GORMAN G S, SCHAEFER A M, NG Y, GOMEZ N, BLAKELY E L, ALSTON C L, FEENEY C, HORVATH R, YU-WAI-MAN P, CHINNERY P F, TAYLOR R W, TURNBULL D M, MCFARLAND R . Prevalence of nuclear and mitochondrial DNA mutations related to adult mitochondrial disease. Annals of Neurology, 2015,77(5):753-759. |
| [2] | BLACKSTONE N W . Book Review: Essential Cell Biology: An introduction to the molecular biology of the cell. Quarterly Review of Biology, 1998,73(4). |
| [3] | CROW M T, MANI K, NAM Y J, KITSIS R N . The mitochondrial death pathway and cardiac myocyte apoptosis. Circulation Research, 2004,95(10):957-970. |
| [4] | TAANMAN J W . The mitochondrial genome: structure, transcription, translation and replication. Biochimica et Biophysica Acta, 1999,1410(2):103-123. |
| [5] | KUKAT C, WURM C A, SPAHR H, FALKENBERG M, LARSSON N G, JAKOBS S . Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtdna. Proceedings of the National Academy of Sciences of the United States of America, 2011,108(33):13534-13539. |
| [6] | YE K, LU J, MA F, KEINAN A, GU Z . Extensive pathogenicity of mitochondrial heteroplasmy in healthy human individuals. Proceedings of the National Academy of Sciences of the United States of America, 2014,111(29):10654-10659. |
| [7] | STEWART J B, CHINNERY P F . The dynamics of mitochondrial DNA heteroplasmy: implications for human health and disease. Nature Reviews Genetics, 2015,16(9):530-542. |
| [8] | YUSNITA Y, NORSIAH M D, RAHMAN A J . Mutations in mitochondrial NADH dehydrogenase subunit 1 (mtnd1) gene in colorectal carcinoma. The Malaysian Journal of Pathology, 2010,32(2):103-110. |
| [9] | GIULIANI C, BARBIERI C, LI M, BUCCI L, MONTI D, PASSARINO G, LUISELLI D, FRANCESCHI C, STONEKING M, GARAGNANI P . Transmission from centenarians to their offspring of mtdna heteroplasmy revealed by ultra-deep sequencing. Aging, 2014,6(6):454-467. |
| [10] | LOUTRE R, HECKEL A M, JEANDARD D, TARASSOV I, ENTELIS N . Anti-replicative recombinant 5S rrna molecules can modulate the mtdna heteroplasmy in a glucose-dependent manner. PLoS One, 2018,13(6):e0199258. |
| [11] | SCHON E A, DIMAURO S, HIRANO M . Human mitochondrial DNA: roles of inherited and somatic mutations. Nature Reviews Genetics, 2012,13(12):878-890. |
| [12] | YU E P, BENNETT M R . Mitochondrial DNA damage and atherosclerosis. Trends in Endocrinology & Metabolism Tem, 2014,25(9):481-487. |
| [13] | DANCAUSE K N, VILAR M G, STEFFY R, LUM J K . Characterizing genetic diversity of contemporary pacific chickens using mitochondrial DNA analyses. PLoS One, 2011,6(2):e16843. |
| [14] | LIU Y P, WU G S, YAO Y G, MIAO Y W, LUIKART G, BAIG M, BEJA-PEREIRA A, DING Z L, PALANICHAMY M G, ZHANG Y P . Multiple maternal origins of chickens: out of the Asian jungles. Molecular Phylogenetics and Evolution, 2006,38(1):12-19. |
| [15] | MWACHARO J M, BJORNSTAD G, MOBEGI V, NOMURA K, HANADA H, AMANO T, JIANLIN H, HANOTTE O . Mitochondrial DNA reveals multiple introductions of domestic chicken in East Africa. Molecular Phylogenetics and Evolution, 2011,58(2):374-382. |
| [16] | REVAY T, BODZSAR N, MOBEGI V E, HANOTTE O, HIDAS A . Origin of Hungarian indigenous chicken breeds inferred from mitochondrial DNA D-loop sequences. Animal Genetics, 2010,41(5):548-550. |
| [17] | KOMIYAMA T, IKEO K, GOJOBORI T . The evolutionary origin of long-crowing chicken: its evolutionary relationship with fighting cocks disclosed by the mtdna sequence analysis. Gene, 2004,333:91-99. |
| [18] | GUAN X, GENG T, SILVA P, SMITH E J . Mitochondrial DNA sequence and haplotype variation analysis in the chicken (Gallus gallus). Journal of Heredity, 2007,98(7):723-726. |
| [19] | LU W W, HOU L L, ZHANG W W, ZHANG P F, CHEN W, KANG X, HUANG Y . Study on heteroplasmic variation and the effect of chicken mitochondrial ND2. Mitochondrial DNA Part A, DNA Mapping, Sequencing, and Analysis, 2016,27(4):2303-2309. |
| [20] | SAMBROOK J, FRITSCH E F, MANIATIS T . Molecular Cloning. A laboratory Manual. Analytical Biochemistry, 2001,186(1):182-183. |
| [21] | PRUETT C L, WINKER K . The effects of sample size on population genetic diversity estimates in song sparrows Melospiza melodia. Journal of Avian Biology, 2008,39(2):252-256. |
| [22] | TRASK J A, MALHI R S, KANTHASWAMY S, JOHNSON J, GARNICA W T, MALLADI V S, SMITH D G . The effect of SNP discovery method and sample size on estimation of population genetic data for Chinese and Indian rhesus macaques (Macaca mulatta). Primates; Journal of Primatology, 2011,52(2):129-138. |
| [23] | IOMMARINI L, GHELLI A, TROPEANO C V, KURELAC I, LEONE G, VIDONI S, LOMBES A, ZEVIANI M, GASPARRE G, PORCELLI A M . Unravelling the effects of the mutation m.3571insc/MT-ND1 on respiratory complexes structural organization. International Journal of Molecular Sciences, 2018,19(3):764-780. |
| [24] | BARADARAN R, BERRISFORD J M, MINHAS G S, SAZANOV L A . Crystal structure of the entire respiratory complex I. Nature, 2013,494(7438):443-448. |
| [25] | ANTONICKA H, OGILVIE I, TAIVASSALO T, ANITORI R P, HALLER R G, VISSING J, KENNAWAY N G, SHOUBRIDGE E A . Identification and characterization of a common set of complex I assembly intermediates in mitochondria from patients with complex I deficiency. The Journal of Biological Chemistry, 2003,278(44):43081-43088. |
| [26] | TURRENS J F . Mitochondrial formation of reactive oxygen species. The Journal of Physiology, 2003,552(2):335-344. |
| [27] | MAGNACCA K N, BROWN M J . Mitochondrial heteroplasmy and DNA barcoding in Hawaiian Hylaeus (Nesoprosopis) bees (Hymenoptera: Colletidae). BMC Evolutionary Biology, 2010,10(1):174. |
| [28] | REINER J E, KISHORE R B, LEVIN B C, ALBANETTI T, BOIRE N, KNIPE A, HELMERSON K, DECKMAN K H . Detection of Heteroplasmic Mitochondrial DNA in Single Mitochondria. PLoS One, 2010,5(12):e14359. |
| [29] | RAMOS A, SANTOS C, MATEIU L, GONZALEZ MDEL M, ALVAREZ L, AZEVEDO L, AMORIM A, ALUJA M P . Frequency and pattern of heteroplasmy in the complete human mitochondrial genome. PLoS One, 2013,8(10):e74636. |
| [30] | WALLACE D C . Mitochondrial DNA mutations in disease and aging. Environmental and Molecular Mutagenesis, 2010,51(5):440-450. |
| [31] | PATANANAN A N, WU T H, CHIOU P Y, TEITELL M A . Modifying the Mitochondrial Genome. Cell Metabolism, 2016,23(5):785-796. |
| [32] | SIMON D K, MAYEUX R, MARDER K, KOWALL N W, BEAL M F, JOHNS D R . Mitochondrial DNA mutations in complex I and trna genes in Parkinson's disease. Neurology, 2000,54(3):703-709. |
| [33] | BROWN M D, ZHADANOV S, ALLEN J C, HOSSEINI S, NEWMAN N J, ATAMONOV V V, MIKHAILOVSKAYA I E, SUKERNIK R I, WALLACE D C . Novel mtdna mutations and oxidative phosphorylation dysfunction in Russian LHON families. Human Genetics, 2001,109(1):33-39. |
| [34] | SUDOYO H, SURYADI H, LERTRIT P, PRAMOONJAGO P, LYRAWATI D, MARZUKI S . Asian-specific mtdna backgrounds associated with the primary G11778A mutation of Leber's hereditary optic neuropathy. Journal of Human Genetics, 2002,47(11):594-604. |
| [35] | HOWELL N, BINDOFF L A, MCCULLOUGH D A, KUBACKA I, POULTON J, MACKEY D, TAYLOR L, TURNBULL D M . Leber hereditary optic neuropathy: Identification of the same mitochondrial NDI mutation in six pedigrees. American Journal of Human Genetics, 1991,49(5):939-950. |
| [36] | ABU-AMERO K K, ALZAHRANI A S, ZOU M, SHI Y . High frequency of somatic mitochondrial DNA mutations in human thyroid carcinomas and complex I respiratory defect in thyroid cancer cell lines. Oncogene, 2005,24(8):1455-1460. |
| [37] | WANG J W, CHEN W, KANG X T, HUANG Y Q, TIAN Y D, WANG Y B . Identification of differentially expressed genes induced by energy restriction using annealing control primer system from the liver and adipose tissues of broilers. Poultry Science, 2012,91(4):972-978. |
| [38] | MERLO PICH M, RAULE N, CATANI L, FAGIOLI M E, FAENZA I, COCCO L, LENAZ G . Increased transcription of mitochondrial genes for Complex I in human platelets during ageing. FEBS Letters, 2004,558(1-3):19-22. |
| [39] | LU W W, HOU L L, ZHANG W W, ZHANG P F, CHEN W, KANG X, HUANG Y . Study on heteroplasmic variation and the effect of chicken mitochondrial ND2. Mitochondrial DNA Part A, DNA Mapping, Sequencing, and Analysis, 2016,27(4):2303-2309. |
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