Scientia Agricultura Sinica ›› 2017, Vol. 50 ›› Issue (3): 582-590.doi: 10.3864/j.issn.0578-1752.2017.03.017

• RESEARCH NOTES • Previous Articles     Next Articles

Construction and Activity Analysis of the Promoter of Purple Acid Phosphatase Gene GmPAP4 in Soybean

KONG YouBin, LI XiHuan, ZHANG CaiYing   

  1. College of Agronomy, Agricultural University of Hebei/North China Key Laboratory for Germplasm Resources of Ministry of Education, Baoding 071001, Hebei)
  • Received:2016-10-06 Online:2017-02-01 Published:2017-02-01

Abstract: 【Objective】GmPAP4 promoter (PAP4-pro) was cloned, and its expression character was analyzed, thus providing a basis for research of regulatory mechanism of GmPAP4.【Method】On the basis of GmPAP4 (GenBank No. HQ162477) cDNA sequence and blasting the soybean reference genome, GmPAP4 promoter sequence was cloned with specific primers. The promoter regulatory elements were predicted through the online database PLACE and PlantCARE. PAP4-pro-GUS was constructed and transformed into Agrobacterium tumefaciens GV3101, which subsequently was transformed into Arabidopsis thaliana with Floral dip method. The T3 transgenic plants were obtained by being screened with kanamycin (kan) and PCR amplification.【Result】GmPAP4 promoter was cloned, and its regulatory elements were analyzed using online databases PLACE and PlantCARE. The results showed that the promoter of GmPAP4 not only contained the core elements, but also contained the following elements: (1) tissue specific regulatory elements including as1 (root specific expression element), Skn-1_motif (endosperm specific expression element); (2): Response elements including TC-rich repeats (stress responsive elements), Box-W3 (fungal response related regulatory element); (3) binding sites including MBS (MYB binding sites of transcription factors), etc. The results of GUS staining showed that GmPAP4 promoter was mainly expressed in roots of transgenic Arabidopsis. The expression and activity of GUS measurement showed that GUS expression and GUS activity in roots of transgenic plants under phytate condition was, respectively, 1.3-fold (P<0.05) and 1.9-fold (P<0.05) than that under normal phosphorus condition.【Conclusion】Soybean GmPAP4 promoter was obtained in this study. According to GUS staining in different tissues and activity analysis under different phosphorus conditions, it was found that the promoter of GmPAP4 was mainly expressed in roots and significantly induced by low phosphorus signal.

Key words: soybean, GmPAP4, promoter, tissue specificity, response to phytate phosphorus starvation

[1]    Butler J E F, Kadonaga J T. The RNA polymerase II core promoter: a key component in the regulation of gene expression. Genes & Development, 2002, 16(20): 2583-2592.
[2]    Butler J E F, Kadonaga J T. Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs. Genes & Development, 2001, 15(19): 2515-2519.
[3]    Smale S T, Kadonaga J T. The RNA polymerase II core promoter. Annual Review of Biochemistry, 2003, 72(1): 449-479.
[4]    Breathnach R, Chambon P. Organization and expression of eukaryotic split genes coding for proteins. Annual Review of Biochemistry, 1981, 50(1): 349-383.
[5]    Li D, Zhu H, Liu K, Liu X, Leggewie G, Udvardi M, Wang D. Purple acid phosphatases of Arabidopsis thaliana comparative analysis and differential regulation by phosphate deprivation. Journal of Biological Chemistry, 2002, 277(31): 27772-27781.
[6]    Hur Y J, Jin B R, Nam J, Chung Y S, Lee J H, Choi H K, Yun D J, Yi G, Kim Y H, Kim D H. Molecular characterization of OsPAP2: transgenic expression of a purple acid phosphatase up-regulated in phosphate-deprived rice suspension cells. Biotechnology Letters, 2010, 32(1): 163-170.
[7]    肖凯, 谷俊涛, Harrison M, Wang Z Y. MtPAP1表达特性及异源表达对拟南芥有机态磷吸收的影响. 植物生理与分子生物学学报, 2006, 32(1): 99-106.
XIAO K, GU J T, Harrison M, Wang Z Y. Effects of MtPAP1 expression and heterologous expression on the absorption of organic phosphorus in Arabidopsis thaliana. Journal of Plant Physiology and Molecular Biology, 2006, 32(1): 99-106. (in Chinese)
[8]    Xiao K, Zhang J H, Harrison M, Wang Z Y. Ectopic expression of a phytase gene from Medicago truncatula barrel medic enhances phosphorus absorption in plants. Journal of Integrative Plant Biology, 2006, 48(1): 35-43.
[9]    Wang X R, Wang Y X, Tian J, Lim B L, Yan X L, Liao H. Overexpressing AtPAP15 enhances phosphorus efficiency in soybean. Plant Physiology, 2009, 151(1): 233-240.
[10]   Bozzo G G, Raghothama K G, Plaxton W C. Purification and characterization of two secreted purple acid phosphatase  isozymes from phosphate-starved tomato (Lycopersicon esculentum) cell cultures. European Journal of Biochemistry, 2002, 269(24): 6278-6287.
[11]   Liang C, Tian J, Lam H M, Lim B L, Yan X L, Liao H. Biochemical and molecular characterization of PvPAP3, a novel purple acid phosphatase isolated from common bean enhancing extracellular ATP utilization. Plant Physiology, 2010, 152(2): 854-864.
[12]   Li C C, Gui S H, Yang T, Walk T, Wang X R, Liao H. Identification of soybean purple acid phosphatase genes and their expression responses to phosphorus availability and symbiosis. Annals of Botany, 2012, 109(1): 275-285.
[13]   Liao H, Wong F L, Phang T H, Cheung M Y, Li W Y F, Shao G H, Yan X L, Lam H M. GmPAP3, a novel purple acid phosphatase-like gene in soybean induced by NaCl stress but not phosphorus deficiency. Gene, 2003, 318(318): 103-111.
[14]   Kong Y, Li X, Ma J, Li W L, Yan G J, Zhang C Y. GmPAP4, a novel purple acid phosphatase gene isolated from soybean (Glycine max), enhanced extracellular phytate utilization in Arabidopsis thaliana. Plant Cell Reports, 2014, 33(4): 655-667.
[15]   Robinson W D, Park J, Tran H T, Del Vecchio H A, Ying S, Zins J L, Patel K, McKnight T D, Plaxton W C. The secreted purple acid phosphatase isozymes AtPAP12 and AtPAP26 play a pivotal role in extracellular phosphate-scavenging by Arabidopsis thaliana. Journal of Experimental Botany, 2012, 63(18): 6531-6542.
[16]   Wang L S, Li Z, Qian W Q, Guo W L, Gao X, Huang L L, Wang H, Zhu H F, Wu J W, Wang D W, Liu D. The Arabidopsis purple acid phosphatase AtPAP10 is predominantly associated with the root surface and plays an important role in plant tolerance to phosphate limitation. Plant Physiology, 2011, 157(3): 1283-1299.
[17]   周小琼, 丁一琼, 左丽, 喻德跃. 大豆硫转运蛋白基因GmSULTR1;2b启动子的克隆及活性分析. 中国农业科学, 2015, 48(8): 1650-1659.
ZHOU X Q, DING Y Q, ZUO L, YU D Y. Cloning and activity analysis of the promoter of sulfate transporter gene GmSULTR1;2b. Scientia Agricultura Sinica, 2015, 48(8): 1650-1659. (in Chinese)
[18]   雷建峰, 伍娟, 陈晓俊, 於添平, 倪志勇, 李月, 张巨松, 刘晓东. 棉花花粉中高效转录U6启动子的克隆及功能分析. 中国农业科学, 2015, 48(19): 3794-3802.
LEI J F, WU J, CHEN X J, YU Q P, NI Z Y, LI Y, ZHANG J S, LIU X D. Cloning and functional analysis of cotton U6 promoter with high transcription activity in cotton pollen. Scientia Agricultura Sinica, 2015, 48(19): 3794-3802. (in Chinese)
[19]   黄方, 何慧, 迟英俊, 盖钧镒, 喻德跃. 大豆GmTINY1基因的克隆与表达分析. 作物学报, 2009, 35(12): 2174-2179.
HUANG F, HE H, CHI Y J, GAI J Y, YU D Y. Cloning and characterization of GmTINY1 gene in soybean (Glycine max). Acta Agronomica Sinica, 2009, 35(12): 2174-2179. (in Chinese)
[20]   Kuang R, Chan K H, Yeung E, Lim B L. Molecular and biochemical characterization of AtPAP15, a purple acid phosphatase with phytase activity in Arabidopsis. Plant Physiology, 2009, 151(1): 199-209.
[21]   Scarpella E, Francis P, Berleth T. Stage specific markers define early steps of procambium development in Arabidopsis leaves and correlate termination of vein formation with mesophyⅡ differentiation. Development, 2004, 131(14): 3445-3455.
[22]   Schenk G, Ge Y, Carrington L E, Wynne C J, Searle I R, Carroll B J, Hamilton S, De Jersey J. Binuclear metal centers in plant purple acid phosphatases: Fe-Mn in sweet potato and Fe-Zn in soybean. Archives of Biochemistry and Biophysics, 1999, 370(2): 183-189.
[23]   Olczak M, Morawiecka B, Watorek W. Plant purple acid phosphatases-genes, structures and biological function. Acta Biochimica Polonica, 2003, 50(4): 1245-1256.
[24]   Zhang Q, Wang C, Tian J, Li K, Shou H. Identification of rice purple acid phosphatases related to phosphate starvation signalling. Plant Biology, 2011, 13(1): 7-15.
[25]   李利华, 邱旭华, 李香花, 王石平, 练兴明. 低磷胁迫水稻根部基因表达谱研究. 中国科学C辑: 生命科学, 2009, 39(6): 549-558.
LI L H, QIU X H, LI X H, WANG S P, LIAN X M. Analysis of gene expression profile of rice roots under low phosphorus stress. Science in China Series C: Life Sciences, 2009, 39(6): 549-558. (in Chinese)
[26]   Del Vecchio H A, Ying S, Park J, Knowles V L, Kanno S, Tanoi K, She Y M, Plaxton W C. The cell wall-targeted purple acid phosphatase AtPAP25 is critical for acclimation of Arabidopsis thaliana to nutritional phosphorus deprivation. The Plant Journal, 2014, 80(4): 569-581.
[27]   Lu L H, Qiu W M, Gao W W, Tyerman S D, Shou H X, Wang C. OsPAP10c, a novel secreted acid phosphatase in rice, plays an important role in the utilization of external organic phosphorus. Plant, Cell and Environment, 2016, 39(10): 2247-2259.
[28]   Nilsson L, Lundmark M, Jensen P E, Nielsen T H. The Arabidopsis transcription factor PHR1 is essential for adaptation to high light and retaining functional photosynthesis during phosphate starvation. Physiologia Plantarum, 2012, 144(1): 35-47.
[29]   Christensen A H, Sharrock R A, Quail P H. Maize polyubiquitin genes: structure, thermal perturbation of expression and transcript splicing, and promoter activity following transfer to protoplasts by electroporation. Plant Molecular Biology, 1992, 18(4): 675-689.
[30]   Dey N, Maiti I B. Structure and promoter/leader deletion analysis of mirabilis mosaic virus (MMV) full-length transcript promoter in transgenic plants. Plant Molecular Biology, 1999, 40(5): 771-782.
[31]   Odell J T, Nagy F, Chua N H. Identification of DNA sequences required for activity of the cauliflower mosaic virus 35S promoter. Nature, 1985, 313(6005): 810-812.
[32]   Fleming A J, Manzara T, Gruissem W, Kuhlemeier C. Fluorescent imaging of GUS activity and RT-PCR analysis of gene expression in the shoot apical meristem. The Plant Journal, 1996, 10(4): 745-754.
[33]   Hamilton D A, Schwarz Y H, Mascarenhas J P. A monocot pollen-specific promoter contains separable pollen-specific and quantitative elements. Plant Molecular Biology, 1998, 38(4): 663-669.
[34]   Johansson A M, Wang C, Stenberg A, Hertzberg M, Little C H, Olsson O. Characterization of a PttRPS18 promoter active in the vascular cambium region of hybrid aspen. Plant Molecular Biology, 2003, 52(2): 317-329.
[35]   Kasuga M, Miura S, Shinozaki K, Yamaguchi- Shinozaki K. A combination of the Arabidopsis DREB1A gene and stress-inducible rd29A promoter improved drought-and low-temperature stress tolerance in tobacco by gene transfer. Plant and Cell Physiology, 2004, 45(3): 346-350.
[36]   Marcotte W R, Russell S H, Quatrano R S. Abscisic acid-responsive sequences from the Em gene of wheat. The Plant Cell, 1989, 1(10): 969-976.
[1] LI YongJuan, ZHANG YueTong, WANG YiBo, ZHAO ChangJiang, SONG Jie, CHEN XueLi, YAO Qin. Effects of Biochar Application on the Abundance and Community Composition of Nitrogen-Fixing Microbial nifH Gene in Soybean Rotation and Continuous Cropping Systems [J]. Scientia Agricultura Sinica, 2026, 59(6): 1272-1285.
[2] LIU FangDong, SUN Lei, WANG WuBin, ZHAO JinMing, GAI JunYi. Changes of Cropping System and Suggestions on Ecological Cultivation Regions of Soybeans in China [J]. Scientia Agricultura Sinica, 2026, 59(3): 486-498.
[3] CAI TingYang, ZHU YuPeng, LI RuiDong, WU ZongSheng, XU YiFan, SONG WenWen, XU CaiLong, WU CunXiang. Effects of Leaf-Cutting at Seedling Stage on Photosynthetic Characteristics, Pod Distribution and Yield Formation in Soybean in the Huang-Huai-Hai Region [J]. Scientia Agricultura Sinica, 2026, 59(2): 292-304.
[4] WU Qiong, XIE XiangTing, WANG Lei, MOU Yong, LI JinWei. Development and Validation of Event-Specific PCR Method for the Quantification of Genetically Modified Soybean DBN8205 [J]. Scientia Agricultura Sinica, 2026, 59(1): 29-40.
[5] LIU LuPing, HU XueJie, QI Jin, CHEN Qiang, LIU Zhi, ZHAO TianTian, SHI XiaoLei, LIU BingQiang, MENG QingMin, ZHANG MengChen, HAN TianFu, YANG ChunYan. Cloning of the Promoters and Analysis of Expression Patterns of Maturity Genes E1 and E2 in Soybean [J]. Scientia Agricultura Sinica, 2025, 58(5): 840-850.
[6] ZHENG Yu, CHEN Yi, TI JinSong, SHI LongFei, XU XiaoBo, LI YuLin, GUO Rui. Evaluation of Carbon Footprint and Economic Benefit of Different Tobacco Rotation Patterns [J]. Scientia Agricultura Sinica, 2025, 58(4): 733-747.
[7] ZHANG Qi, XUE FuZhen, YANG XiuJie, JIANG SuYang, HUANG XueJuan, MA JiaYi, ZHANG ZheWen, XU JieFei. Study on the Function of Soybean Nicotinamide Enzyme GmNIC1 Gene Under Saline Alkali Stress [J]. Scientia Agricultura Sinica, 2025, 58(24): 5128-5142.
[8] MA HeXiao, GE GuoLong, ZHANG XiangQian, LU ZhanYuan, WANG ManXiu, RONG MeiRen, SHI JingJing, ZHANG DeJian, SUN XuePing. Effects of Different Crop Rotation Systems on Soil Readily Oxidized Organic Carbon and Carbon Pool Activity Differences [J]. Scientia Agricultura Sinica, 2025, 58(24): 5201-5215.
[9] GAO ChunHua, ZHAO HaiJun, ZHAO FengTao, KONG WeiLin, JU FeiYan, LI ZongXin, SHI DeYang, LIU Ping. Effect of Growth Regulators on the Stem Characteristics and Yield of Summer Maize in Maize-Soybean Strip Intercropping [J]. Scientia Agricultura Sinica, 2025, 58(23): 4920-4935.
[10] YANG ShuQi, ZHAO YingXing, QIAN Xin, ZHANG XuePeng, MENG WeiWei, SUI Peng, LI ZongXin, CHEN YuanQuan. Comprehensive Evaluation of the Maize-Soybean Intercropping Pattern in the Huang-Huai Region [J]. Scientia Agricultura Sinica, 2025, 58(23): 4936-4951.
[11] FANG Jian, QIN ZhaoJi, YU YuanYuan, YU NingNing, ZHAO Bin, LIU Peng, REN BaiZhao, ZHANG JiWang. Impacts of Varying Row Ratio Arrangements on Plant Performance, Stand Yield, and Comprehensive Benefits in Soybean-Maize Strip intercropping [J]. Scientia Agricultura Sinica, 2025, 58(23): 4841-4857.
[12] SONG XuHui, ZHAO XueYing, ZHAO Bin, REN BaiZhao, ZHANG JiWang, LIU Peng, REN Hao. Effects of Row Ratio Allocation on Light Distribution and Photosynthetic Production Capacity of Maize-Soybean Strip Intercropping [J]. Scientia Agricultura Sinica, 2025, 58(23): 4858-4871.
[13] SHI DeYang, GAO ChunHua, LI YanHong, ZHAO HaiJun, XIA DeJun. Effects of Row Spacing Configuration on the Canopy Characteristics and Grain Yield of the Intercropping Maize [J]. Scientia Agricultura Sinica, 2025, 58(23): 4872-4885.
[14] ZHANG MengYu, HE ZaiJu, WANG XingXing, REN Hao, REN BaiZhao, LIU Peng, ZHANG JiWang, ZHAO Bin. The Influences of Different Plant Height Combinations of Maize Varieties on Light Distribution in the Canopy and the Photosynthetic Characteristics of Maize Under Maize-Soybean Strip Intercropping Pattern [J]. Scientia Agricultura Sinica, 2025, 58(23): 4886-4904.
[15] KONG WeiLin, GAO ChunHua, ZHAO FengTao, JU FeiYan, LI ZongXin, ZHAO HaiJun, LIU Ping. Effects of Nitrogen Application Rate Combined with Drip Irrigation Amount After Sowing on Yield, Economic Benefit, Water Use Characteristics of Maize-Soybean Strip Intercropping Planting System [J]. Scientia Agricultura Sinica, 2025, 58(23): 4905-4919.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!