Scientia Agricultura Sinica ›› 2013, Vol. 46 ›› Issue (24): 5075-5080.doi: 10.3864/j.issn.0578-1752.2013.24.001

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS •     Next Articles

Progress in Research of Chromosome Segment Substitution Line Carrying Overlapping Chromosome Segments of the Whole Wild Rice Genome

YE Xin-Fu, YANG De-Wei   

  1. Institute of Rice, Fujian Academy of Agricultural Sciences, Fuzhou 350018
  • Received:2013-06-26 Online:2013-12-16 Published:2013-08-14

Abstract: Wild rice has adapted to weather and unfavorable environments under natural selection. It has been well recognized as a natural gene bank that conserves a lot of specific genes presently not available for extinct in the cultivated rice. The chromosome segment substitution lines (CSSLs) were perfect materials for analysis of gene. Developing the CSSLs can not only search and use the new gene resource,but also can achieve the development of span mode of plant molecular breeding from utilizing single gene to synthetically exploiting genome. In this paper, the principle of developing the CSSLs was described, the research progress in construction and application was reviewed, and the prospect was discussed. So that it could provide a base for utilization of wild rice resource.

Key words: wild rice , chromosome segment substitution lines (CSSLs) , construction

[1]汤圣祥, 江云球, 张本郭, 陆永良, 余柳青, 余汉勇. 中国稻区的生物多样性. 生物多样性, 1999, 7(1): 73-78.

Tang S X, Jiang Y Q, Zhang B G, Lu Y L,Yu L Q, Yu H Y. Biodiversfty of rice growing regions in China. Chinese Biodiversity, 1999, 7(1): 73-78. (in Chinese)

[2]汤圣祥, 魏兴华, 徐群. 国外对野生稻资源的评价和利用进展. 植物遗传资源学报, 2008, 9(2): 223-229.

Tang S X, Wei X H, Xu Q. Progress of Evaluation and utilization of wild rice resources abroad, Journal of Plant Genetic Resources, 2008, 9(2): 223-229. (in Chinese)

[3]Ramsay L D, Jennings D E, Kearsey M J, Marshall D F, Bohuon E J, Arthur A E, Lydiate D J. The construction of a substitution library of recombinant backcross lines in Brassica oleracea for the precision mapping of quantitative trait loci. Genome, 1996, 39(3): 558-567.

[4]Doi K, Iwata N, Yoshimura A. The construction of chromosome substitution lines of African rice (Oryza glaberrima Steud.) in the background of Japonica rice (O.sativa L.). Rice Genetics Newsletters, 1997, 14: 39-41.

[5]Eshed Y, Zamir D. An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL. Genetics, 1995, 141: 1147-1162.

[6]Sobrizal K, Ikeda K, Sanchez P L, Yoshimura A. RFLP mapping of a seed shattering gene on chromosome 4 in rice. Rice Genetics Newsletters, 1999, 16: 74-75.

[7]Kurakazu T, Sobrizal, Ikeda K, Sanchez P L, Doi K, Angeles E R, Khush G S, Yoshimura A. Oryza meridionalis chromosomal segment introgression lines in cultivated rice, O. sativa L.. Rice Genetics Newsletters, 2001, 18: 81-82.

[8]郝伟, 金健, 孙世勇, 朱美珍, 林鸿宣. 覆盖野生稻基因组的染色体片段替换系的构建及其米质相关数量性状基因座位的鉴定. 植物生理与分子生物学学报, 2006, 32(3): 354-362.

Hao W, Jin J, Sun S Y, Zhu M Z, Lin H X. Construction of chromosome segment substitution lines carrying overlapping chromosome segments of the whole wild rice genome and identification of quantitative trait loci for rice quality. Journal of Plant Physiology and Molecular Biology, 2006, 32(3): 354-362. (in Chinese)

[9]李德军. 江西东乡普通野生稻渗入系的构建及高产QTL定位[D]. 北京: 中国农业大学, 2003.

Li D J. Development and QTL analysis of chromosome segment substitution lines in chinese Dongxiang common wild rice[D]. Beijing: China Agricultural University, 2003. (in Chinese)

[10]董华林, 张晨昕, 曾波, 孙文强, 余四斌. 利用野生稻高代回交群体分析水稻农艺性状QTL. 华中农业大学学报, 2009, 28(6): 645-650.

Dong H L, Zhang C X, Zeng B, Sun W Q, Yu S B. Identification of agronomic traits QTL in common wild rice advanced backcross population. Journal of Huazhong Agricultural University, 2009, 28(6): 645-650. (in Chinese)

[11]刘家富, 奎丽梅, 朱作峰, 谭禄宾, 王桂娟, 黎其万, 束继红, 孙传清. 普通野生稻稻米加工品质和外观品质性状QTL定位. 农业生物技术学报, 2007, 15(1): 90-96.

Liu J F, Kui L M, Zhu Z F, Tan L B, Wang G J, Li Q W, Shu J H, Sun C Q. Identification of QTLs associated with processing quality and appearance quality of common wild rice (Ozyza rufipogon Griff). Journal of Agricultural Biotechnology, 2007, 15(1): 90-96. (in Chinese)

[12]Gutierrez A G, Carabali S J, Giraldo O X, Martinez C P, Correa F, PradoG, Tohme J, Lorieux M. ldentification of a rice stripe necrosis virus resistance locus and yield component QTLs using O.sativa× O.glaberrima introgression lines. BMC Plant Biology, 2010, 10: 6.

[13]Li J M, Thomosom M, McCouch S R. Fine mapping of a grain-weight quantitative trait locus in the pericenttromeric region of rice chromosome 3. Genetic Society of America, 2004, 168: 2187-2195.

[14]Xie X B, Song M H, Jin F X, Ahn S N, Sun J P, Hwang H G, McCouch S R. Fine mapping of a grain quantitative trait locus on rice chromosome 8 using near-isogenic lines drived from across between O. sative × O. rufipogon. Theoretical and Applied Genetics, 2006, 113: 885-894.

[15]Xie X B, Jin F X, Song M H, Sun J P, Hwang H G, Kim Y G, Ahn S N, McCouch S R. Fine mapping of a yield-enhancing QTL cluster associated with transgressive variation in an O. sative × O. rufipogon cross. Theoretical and Applied Genetics, 2008, 116: 613-622.

[16]Shan J X, Zhu M Z, Shi M, Gao J P, Lin H X. Fine mapping and candidate gene analysis of spd6,responsible for small panicle and dwarfness in wild rice ( Oryza rufipogon Griff. ). Theoretical and Applied Genetics, 2009, 119: 827 -836.

[17]Chen C, Chen H, Shan J X, Zhu M Z, Shi M, Gao J P, Lin H X. Genetic and physiological analysis of a novel type of interspecific hybrid weakness in rice. Molecular Plant, 2013, 6: 716-728.

[18]傅雪琳, 卢永根, 刘向东, 李金泉. 利用种间杂交途径向栽培稻转移非AA组野生稻有利基因的研究进展. 中国水稻科学, 2007, 21(6): 559-566.

Fu X L, Lu Y G, Liu X D, Li J Q. Progress on transferring elite genes from non-AA genome wild rice into Oryza sativa through interspecific hybridization. Chinese Journal of Science, 2007, 21(6): 559-566. (in Chinese)

[19]钟代彬, 罗利军, 应存山. 野生稻有利基因转移研究进展. 中国水稻科学, 2000, 14(2): 103-106.

Zhong D B, Luo L J, Ying C S. Advances on transferring elite gene from wild rice species into cultivated rice. Chinese Journal of Science, 2000, 14(2): 103-106. (in Chinese)

[20]杨德卫, 曾美娟, 卢礼斌, 叶宁, 刘成德, 郑向华, 叶新福. 一个水稻矮秆突变体的遗传分析及基因定位. 植物学报, 2011, 46(6): 617-624.

Yang D W, Zeng M J, Lu L B, Ye N, Liu C D, Zheng X H, Ye X F. Genetic analysis and mapping of rice (Oryza sativa L.) DS1 mutant. Chinese Bulletin of Botany, 2011, 46(6): 617-624. (in Chinese)

[21]杨空松, 贺浩华, 陈小荣. 野生稻有利基因的挖掘利用及研究进展. 种子, 2005, 24(12): 92-95.

Yang K S, He H H, Chen X Y. Research advance in the utilization of excellent resource of wild rice. Seed, 2005, 24(12): 92-95. (in Chinese)

[22]张顺堂, 陈立云, 张桂莲. 野生稻种质资源优异基因定位和利用的研究进展. 安徽农业科学, 2008, 36(3): 933-935.

Zhang S T, Chen L Y, Zhang G L. Research advance in the gene mapping and utilization of excellent resource of wild rice. Journal of Anhui Agircultural Sciences, 2008, 36(3): 933-935. (in Chinese)
[1] FANG MengYing,LU Lin,WANG QingYan,DONG XueRui,YAN Peng,DONG ZhiQiang. Effects of Ethylene-Chlormequat-Potassium on Root Morphological Construction and Yield of Summer Maize with Different Nitrogen Application Rates [J]. Scientia Agricultura Sinica, 2022, 55(24): 4808-4822.
[2] LIU YuQing,YAN GaoWei,ZHANG Tong,LAN JinPing,GUO YaLu,LI LiYun,LIU GuoZhen,DOU ShiJuan. Overexpression of OsPR1A Enhanced Xa21-Mediated Resistance to Rice Bacterial Blight [J]. Scientia Agricultura Sinica, 2021, 54(23): 4933-4942.
[3] WANG Ling,CAI Yi,WANG GuiChao,WANG Di,SHENG YunYan. Specific Length Amplified Fragment (SFLA) Sequencing Mapping Construction and QTL Analysis of Fruit Related Traits in Muskmelon [J]. Scientia Agricultura Sinica, 2021, 54(19): 4196-4206.
[4] XIAO ShunFu, LIU ShengPing, LI ShiJuan, DU MingZhu, Lü ChunYang, LIU DaZhong, YANG FeiFei, LIU Hang. Multi-View Geometric Reconstruction of Plant Based on Improved Region-Growing Algorithm [J]. Scientia Agricultura Sinica, 2019, 52(16): 2776-2786.
[5] CHENG Jie, ZHANG XinSheng, LI AnQi, JIANG Jing. Functional Analysis of SlSWEET7a Gene During Maturation of Tomato Fruits [J]. Scientia Agricultura Sinica, 2018, 51(15): 2958-2968.
[6] ZHONG ShouQin, LIU Juan, LIU WeiPing, WEI ChaoFu. Engineering Design Parameters of Farming Plots Construction and Plot Characteristics in Hilly Area: A Case Study of Chongqing [J]. Scientia Agricultura Sinica, 2017, 50(23): 4558-4574.
[7] LIU Ai-jing, LI Ni, MA Min, HE Jun-min. Effects of UV-B Radiation on Pollen Tube Growth in Picea wilsonii [J]. Scientia Agricultura Sinica, 2016, 49(5): 825-831.
[8] LUO Wei-yu, ZHU Peng-yang, ZHANG Jie, HU Yong-hao, KONG Hui-hui, LIANG Li-bin, ZHOU Yuan, LI Cheng-jun, JIANG Li, CHEN Hua-lan. Construction of cDNA Library Derived from Human Lung Epithelial Cell Lines and Screening for Host Cellular Proteins Interacting with Influenza Virus Nucleoprotein [J]. Scientia Agricultura Sinica, 2016, 49(22): 4451-4459.
[9] WEN Wei-liang, GUO Xin-yu, ZHAO Chun-jiang, WANG Chuan-yu, XIAO Bo-xiang. Crop Roots Configuration and Visualization: A Review [J]. Scientia Agricultura Sinica, 2015, 48(3): 436-448.
[10] ZHAO Chun-jiang, LU Sheng-lian, GUO Xin-yu, DU Jian-jun, WEN Wei-liang, MIAO Teng. Advances in Research of Digital Plant: 3D Digitization of Plant Morphological Structure [J]. Scientia Agricultura Sinica, 2015, 48(17): 3415-3428.
[11] JIA Shi-Rong-1, YUAN Qian-Hua-2, WANG Feng-3, YAO Ke-Min-4, PEI Xin-Wu-1, HU Ning-4, WANG Zhi-Xing-1, WANG Xu-Jing-1, LIU Wu-Ge-3, QIAN Qian-5. What We Have Learnt in Ten Years′ Study of Rice Transgene Flow [J]. Scientia Agricultura Sinica, 2014, 47(1): 1-10.
[12] WANG Xiao, WEN Wei-Liang, GUO Xin-Yu, WANG Chuan-Yu. 3D Reconstruction and Porosity Computing of Soil Based on SFS Algorithm [J]. Scientia Agricultura Sinica, 2013, 46(23): 4950-4956.
[13] ZOU Xing-qi,ZHAO Qi-zu,FAN Yun-feng,ZHU Yuan-yuan,WANG Qin,XU Lu,FAN Xue-zheng,NING Yi-bao
. Construction of the Full Length Infectious cDNA Clones of CSFV C Strain and Virus Rescue
[J]. Scientia Agricultura Sinica, 2011, 44(2): 409-416 .
[14] CHEN Rui-ji,GAO Xiang,CHEN Qi-jiao,DONG Jian,ZHAO Wan-chun,LI Yan-liang,WANG Ming-xia,LI Min,PANG Hong-xi,LI Zhe-qing,LIU Jun
.

Cloning and Prokaryotic Expression of an avenin-like from Wheat Variety Shaan 253

[J]. Scientia Agricultura Sinica, 2010, 43(9): 1954-1962 .
[15] SUN Jia-li,YAN Xiao-hong,WANG Li-jun,WEI Wen-hui
. Progress in the Application Study of Cre/loxP Site-Specific Recombination System in Plants#br# [J]. Scientia Agricultura Sinica, 2010, 43(6): 1099-1107 .
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!