





中国农业科学 ›› 2020, Vol. 53 ›› Issue (1): 148-159.doi: 10.3864/j.issn.0578-1752.2020.01.014
所属专题: 专题——黄瓜分子生物学
收稿日期:2019-06-03
接受日期:2019-07-02
出版日期:2020-01-01
发布日期:2020-01-19
联系方式:
宋维源,E-mail:songwy@cau.edu.cn。
基金资助:
WeiYuan SONG,Yu HOU,JianYu ZHAO,XiaoFeng LIU,XiaoLan ZHANG(
)
Received:2019-06-03
Accepted:2019-07-02
Published:2020-01-01
Online:2020-01-19
摘要:
【目的】AtRPL是拟南芥果实发育调控网络中的重要基因,参与胎座框的形成。同源克隆黄瓜的RPL,进行表达模式分析,在拟南芥中异源过表达CsRPL,探究CsRPL的生物学功能。【方法】根据拟南芥AtRPL信息在黄瓜基因组数据库中比对,克隆得到黄瓜CsRPL;利用MEGA5.2对CsRPL与其他物种同源蛋白进行氨基酸序列比对;利用实时荧光定量PCR(qRT-PCR)及原位杂交技术检测CsRPL在黄瓜中的表达模式;在拟南芥中异源表达CsRPL,并对转基因植株进行表达和表型分析。【结果】在黄瓜中存在两个RPL,分别命名为CsRPL1和CsRPL2,均含有BELL-Domain、Homeodomain保守域和两个EAR-Motif。CsRPL1在黄瓜各个部位均有表达,在开放的雄花中表达量最高,且在果实生长前期,其表达量随着果实的发育逐渐降低;CsRPL2在黄瓜各部位表达量均显著低于CsRPL1。原位杂交显示CsRPL1/2在黄瓜果实的胎座框中表达,且杂交信号在茎尖分生组织(SAM)的Central zone(CZ)区域富集。拟南芥异源过表达CsRPL1/2转基因植株的果荚变短,花粉育性降低,且种子发育受到抑制。【结论】CsRPL1/2参与生殖器官的发育,且可能存在功能冗余,在正常生长条件下,CsRPL1优先发挥功能。相比于AtRPL,CsRPL1/2的功能并不完全保守。
宋维源,侯钰,赵剑宇,刘小凤,张小兰. 黄瓜CsRPL1/2的克隆及其功能分析[J]. 中国农业科学, 2020, 53(1): 148-159.
WeiYuan SONG,Yu HOU,JianYu ZHAO,XiaoFeng LIU,XiaoLan ZHANG. Cloning and Functional Analysis of CsRPL1/2 in Cucumber[J]. Scientia Agricultura Sinica, 2020, 53(1): 148-159.
表1
引物序列"
| 引物名称 Primer name | 引物序列Primer sequence (5′-3′) |
|---|---|
| CsRPL1-F | ATGGCTGAGGGTATTGAATCCTAC |
| CsRPL1-R | TCAGCCCACAAAGTCATGTAACAGC |
| CsRPL2-F | ATGGCGGAGGGTTTTGAAGTTTAC |
| CsRPL2-R | TCAAAACCACTCATTTACAAACCCT |
| CsRPL1-1300-F | TACACCAAATCGACTCTAGAATGGCTGAGGGTATTGAATC |
| CsRPL1-1300-A | CCTTGCTCACCATGGTACCGCCCACAAAGTCATGTAACA |
| CsRPL2-1300-F | TACACCAAATCGACTCTAGAATGGCGGAGGGTTTTGAAGT |
| CsRPL2-1300-A | CCTTGCTCACCATGGTACCAAACCACTCATTTACAAACC |
| 35S-F | GTAAGGGATGACGCACAATC |
| CsRPL1-OV-R | ATTGAGAGAAGCGTTGATTTATGAG |
| CsRPL2-OV-R | TACTCAAATGTCGTAACCACTGCTT |
| UBI-F | CACCAAGCCCAAGAAGATC |
| UBI-R | TAAACCTAATCACCACCAGC |
| Actin-F | CCTTCGTCTTGATCTTGCGG |
| Actin-R | AGCGATGGCTGGAACAGAAC |
| CsRPL1-qPCR-F | CCGCTCACAATGGAAAACCC |
| CsRPL1-qPCR-R | AGGATACATTCAAGGGCTCG |
| CsRPL2-qPCR-F | TACGCCTCCTTTCGTTCCACT |
| CsRPL2-qPCR-R | TTGTCGTCGGAGATGTTAGGG |
| CsRPL1-SP6 | GATTTAGGTGACACTATAGAATGCTACCCGCTCACAATGGAAAAC |
| CsRPL1-T7 | TGTAATACGACTCACTATAGGGGTCCACCCATCACATACCCA |
| CsRPL2-SP6 | GATTTAGGTGACACTATAGAATGCTCTTCTTCTTTTTTTTCACCCG |
| CsRPL2-T7 | TGTAATACGACTCACTATAGGGCTTCCAAGGAGTCAAAAACGG |
图1
黄瓜CsRPL1/2与拟南芥AtRPL的进化树和基因结构分析 A:黄瓜与拟南芥BELL亚家族基因蛋白序列系统发育树分析,红色实线框内为AtRPL和与其同源的CsRPL1/2。BEL1(AT5G41410);ATH1(AT4G32980);BLH1(AT2G35940);BLH2/SAW1(AT4G36870);BLH3(AT1G75410);BLH4/SAW2(AT2G23760);BLH5(AT2G27220);BLH6(AT4G34610);BLH7(AT2G16400);BLH8/PNF(AT2G27990);BLH9/RPL(AT5G02030):BLH10(AT1G19700);BLH11(AT1G75430)。B:紫色方块代5′UTR、3′UTR;橙色方块代表外显子;直线代表内含子"
图2
黄瓜CsRPL与其他物种RPL同源蛋白序列比对 A:橙色实线框内为BELL-Domain,蓝色实线框内为Homeodomain,红色虚线框内为EAR-Motif。AtRPL:拟南芥RPL(NP_195823.1);GmRPL:甜瓜RPL(XP_008448414.1);VvRPL:葡萄RPL(XP_010654234.1);PpRPL:桃RPL(XP_007208167.1);GhRPL:棉花RPL(XP_016738976.1);MdRPL:苹果RPL(XP_008363517.1);GmRPL:大豆RPL(XP_003516903.1);SlRPL:番茄RPL(XP_004246395.1);ZmRPL:玉米RPL:(NP_001168681.1);TaRPL:小麦RPL(BAJ04689.1);OsRPL:水稻RPL(XP_015641948.1)。B—E:BELL (B)、Homeodomain保守域(C)和EAR-Motif(D—E)的氨基酸保守性分析。D中的氨基酸序列不包括葡萄、棉花以及单子叶植物玉米、水稻和小麦;星号代表完全保守氨基酸"
| [1] | ROEDER A H K, FERRANDIZ C, YANOFSKY M F . The role of the REPLUMLESS homeodomain protein in patterning the Arabidopsis fruit. Current Biology, 2003,13(18):1630-1635. |
| [2] | SCOTT M P, WEINER A J . Structural relationships among genes that control development: Sequence homology between the Antennapedia, Ultrabithorax, and fushi tarazu loci of Drosophila. Proceedings of the National Academy of Sciences of the United States of America, 1984,81(13):4115-4119. |
| [3] | ITO M, SATO Y, MATSUOKA M . Involvement of homeobox genes in early body plan of monocot. International Review of Cytology, 2002,218:1-35. |
| [4] | HAKE S, SMITH H M S, HOLTAN H, MAGNANI E, MELE G, RAMIREZ J . The role of KNOX genes in plant development. Annual Review of Cell and Developmental Biology, 2004,20:125-151. |
| [5] | BÜRGLIN T R . Analysis of TALE superclass homeobox genes (MEIS, PBC, KNOX, Iroquois, TGIF) reveals a novel domain conserved between plants and animals. Nucleic Acids Research, 1997,25(21):4173-4180. |
| [6] | BÜRGLIN T R . The PBC domain contains a MEINOX domain: coevolution of Hox and TALE homeobox genes. Development Genes and Evolution, 1998,208(2):113-116. |
| [7] | VOLLBRECHT E, VEIT B, SINHA N, HAKE S . The developmental gene knotted-1 is a member of a maize homeobox gene family. Nature, 1991,350(6315):241-243. |
| [8] | BELLAOUI M, PIDKOWICH M S, SAMACH A, KUSHALAPPA K, KOHALMI S E, MODRUSAN Z, CROSBY W L, HAUGHN G W . The Arabidopsis BELL1 and KNOX TALE homeodomain proteins interact through a domain conserved between plants and animals. The Plant Cell, 2001,13(11):2455-2470. |
| [9] | MULLER J, WANG Y M, FRANZEN R, SANTI L, SALAMINI F, ROHDE W . In vitro interactions between barley TALE homeodomain proteins suggest a role for protein-protein associations in the regulation of Knox gene function. Plant Journal, 2001,27(1):13-23. |
| [10] | COLE M, NOLTE C, WERR W . Nuclear import of the transcription factor SHOOT MERISTEMLESS depends on heterodimerization with BLH proteins expressed in discrete subdomains of the shoot apical meristem of Arabidopsis thaliana. Nucleic Acids Research, 2006,34(4):1281-1292. |
| [11] | REISER L, MODRUSAN Z, MARGOSSIAN L, SAMACH A, OHAD N, HAUGHN G W, FISCHER R L . The BELL1 gene encodes a homeodomain protein involved in pattern formation in the Arabidopsis ovule primordium. Cell, 1995,83(5):735-742. |
| [12] | TRAAS J, VERNOUX T . The shoot apical meristem: The dynamics of a stable structure. Philosophical transactions of the Royal Society B-Biological Sciences, 2002,357(1422):737-747. |
| [13] | AIDA M, TASAKA M . Genetic control of shoot organ boundaries. Current Opinion in Plant Biology, 2006,9(1):72-77. |
| [14] | BLECKMANN A, SIMON R . Interdomain signaling in stem cell maintenance of plant shoot meristems. Molecular Cells, 2009,27(6):615-620. |
| [15] | ENDRIZZI K, MOUSSIAN B, HAECKER A, LEVIN J Z, LAUX T . The SHOOT MERISTEMLESS gene is required for maintenance of undifferentiated cells in Arabidopsis shoot and floral meristems and acts at a different regulatory level than the meristem genes WUSCHEL and ZWILLE. Plant Journal, 1996,10(6):967-979. |
| [16] | LONG J A, MOAN E I, MEDFORD J I, BARTON M K . A member of the KNOTTED class of homeodomain proteins encoded by the STM gene of Arabidopsis. Nature, 1996,379(6560):66-69. |
| [17] | BHATT A M, ETCHELLS J P, CANALES C, LAGODIENKO A, DICKINSON H . VAAMANA-a BEL1-like homeodomain protein, interacts with KNOX proteins BP and STM and regulates inflorescence stem growth in Arabidopsis. Gene, 2004,328:103-111. |
| [18] | BYRNE M E, GROOVER A T, FONTANA J R, MARTIENSSEN R A . Phyllotactic pattern and stem cell fate are determined by the Arabidopsis homeobox gene BELLRINGER. Development, 2003,130(17):3941-3950. |
| [19] | SMITH H M S, HAKE S . The interaction of two homeobox genes,BREVIPEDICELLUS and PENNYWISE, regulates internode patterning in the Arabidopsis inflorescence. The Plant Cell, 2003,15(8):1717-1727. |
| [20] | SMITH H M S, CAMPBELL B C, HAKE S . Competence to respond to floral inductive signals requires the homeobox genes PENNYWISE and POUND-FOOLISH. Current Biology, 2004,14(9):812-817. |
| [21] | KANRAR S, BHATTACHARYA M, ARTHUR B, COURTIER J, SMITH H M S . Regulatory networks that function to specify flower meristems require the function of homeobox genes PENNYWISE and POUND-FOOLISH in Arabidopsis. Plant Journal, 2008,54(5):924-937. |
| [22] | ANDRÉS F, ROMERA-BRANCHAT M, MARTÍNEZ-GALLEGOS R, PATEL V, SCHNEEBERGER K, JANG S, ALTMÜLLER J, NÜRNBERG P, COUPLAND G . Floral induction in Arabidopsis by FLOWERING LOCUS T requires direct repression of BLADE-ON- PETIOLE genes by the homeodomain protein PENNYWISE. Plant Physiology, 2015,169(3):2187-2199. |
| [23] | 张娟, 颜爽爽, 赵文圣, 张小兰 . 黄瓜CsFT基因的克隆及其功能分析. 园艺学报, 2013,40(11):2180-2188. |
| ZHANG J, YAN S S, ZHAO W S, ZHANG X L . Cloning and functional analysis of CsFT in cucumber. Acta Horticulturae Sinica, 2013,40(11):2180-2188. (in Chinese) | |
| [24] | 柳美玲, 丁莲, 张小兰 . 蔬菜作物的RNA原位杂交技术. 山西农业大学学报, 2013,33(1):42-45. |
| LIU M L, DING L, ZHANG X L . RNA in situ hybridization in vegetable plants. Journal of Shanxi Agricultural University, 2013,33(1):42-45. (in Chinese) | |
| [25] | HAY A, TSIANTIS M . KNOX genes: versatile regulators of plant development and diversity. Development, 2010,137(19):3153-3165. |
| [26] | BAO X Z, FRANKS R G, LEVIN J Z, LIU Z C . Repression of AGAMOUS by BELLRINGER in floral and inflorescence meristems. The Plant Cell, 2004,16(6):1478-1489. |
| [27] | DINNENY J R, WEIGEL D, YANOFSKY M F . A genetic framework for fruit patterning in Arabidopsis thaliana. Development, 2005,132(21):4687-4696. |
| [28] | KANRAR S, ONGUKA O, SMITH H M S . Arabidopsis inflorescence architecture requires the activities of KNOX-BELL homeodomain heterodimers. Planta, 2006,224(5):1163-1173. |
| [29] | YU L F, PATIBANDA V, SMITH H M S . A novel role of BELL1-like homeobox genes PENNYWISE and POUND-FOOLISH in floral patterning. Planta, 2008,229(3):693-707. |
| [30] | HAMANT O, PAUTOT V . Plant development: A TALE story. Comptes Rendus Biologies, 2010,333(4):371-381. |
| [31] | ETCHELLS J P, MOORE L, JIANG W Z, PRESCOTT H, CAPPER R, SAUNDERS N J, BHATT A M, DICKINSON H G . A role for BELLRINGER in cell wall development is supported by loss-of- function phenotypes. BMC Plant Biology, 2012,12:212. doi: 10.1186/1471-2229-12-212. |
| [32] | ARNAUD N, PAUTOT V . Ring the BELL and tie the KNOX: Roles for TALEs in gynoecium development. Frontiers in Plant Science, 2014,5:93. doi: 10.3389/fpls.2014.00093. |
| [33] | CHÁVEZ MONTES R A, HERRERA-UBALDO H, SERWATOWSKA J, DE FOLTER S . Towards a comprehensive and dynamic gynoecium gene regulatory network. Current Plant Biology, 2015,3:3-12. |
| [34] | BENCIVENGA S, SERRANO-MISLATA A, BUSH M, FOX S, SABLOWSKI R . Control of oriented tissue growth through repression of organ boundary genes promotes stem morphogenesis. Developmental Cell, 2016,39(2):198-208. |
| [35] | GONZÁLEZ-REIG S, RIPOLL J J, VERA A, YANOFSKY M F, MARTÍNEZ-LABORDA A . Antagonistic gene activities determine the formation of pattern elements along the mediolateral axis of the Arabidopsis fruit. PLoS Genetics, 2012,8(11):e1003020. |
| [36] | OHTA M, MATSUI K, HIRATSU K, SHINSHI H, OHME-TAKAGI M . Repression domains of class II ERF transcriptional repressors share an essential motif for active repression. The Plant Cell, 2001,13(8):1959-1968. |
| [37] | HIRATSU K, MATSUI K, KOYAMA T, OHME-TAKAGI M . Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis. Plant Journal, 2003,34(5):733-739. |
| [38] | HILL K, WANG H, PERRY S E . A transcriptional repression motif in the MADS factor AGL15 is involved in recruitment of histone deacetylase complex components. Plant Journal, 2008,53(1):172-185. |
| [39] | TIWARI S B, HAGEN G, GUILFOYLE T J . Aux/IAA proteins contain a potent transcriptional repression domain. The Plant Cell, 2004,16(2):533-543. |
| [40] | HONYS D, TWELL D . Comparative analysis of the Arabidopsis pollen transcriptome. Plant Physiology, 2003,132(2):640-652. |
| [41] | SMYTH D R, BOWMAN J L, MEYEROWITZ E M . Early flower development in Arabidopsis. The Plant Cell, 1990,2(8):755-767. |
| [42] | ITO T, WELLMER F, YU H, DAS P, ITO N, ALVES-FERREIRA M, RIECHMANN J L, MEYEROWITZ E M . The homeotic protein AGAMOUS controls microsporogenesis by regulation of SPOROCYTELESS. Nature, 2004,430(6997):356-360. |
| [43] | HORD C L H, CHEN C B, DEYOUNG B J, CLARK S E, MA H . The BAM1/BAM2 receptor-like kinases are important regulators of Arabidopsis early anther development. The Plant Cell, 2006,18(7):1667-1680. |
| [44] | JIA G X, LIU X D, OWEN H A, ZHAO D Z . Signaling of cell fate determination by the TPD1 small protein and EMS1 receptor kinase. Proceedings of the National Academy of Sciences of the United States of America, 2008,105(6):2220-2225. |
| [45] | ALBRECHT C, RUSSINOVA E, HECHT V, BAAIJENS E, DE VRIES S . The Arabidopsis thaliana SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASES1 and 2 control male sporogenesis. The Plant Cell, 2005,17(12):3337-3349. |
| [46] | MIZUNO S, OSAKABE Y, MARUYAMA K, ITO T, OSAKABE K, SATO T, SHINOZAKI K, YAMAGUCHI-SHINOZAKI K . Receptor- like protein kinase 2 (RPK2) is a novel factor controlling anther development in Arabidopsis thaliana. Plant Journal, 2007,50(5):751-766. |
| [47] | CANALES C, BHATT A M, SCOTT R, DICKINSON H . EXS, a putative LRR receptor kinase, regulates male germline cell number and tapetal identity and promotes seed development in Arabidopsis. Current Biology, 2002,12(20):1718-1727. |
| [48] | FENG B M, LU D H, MA X, PENG Y B, SUN Y J, NING G, MA H . Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development. Plant Journal, 2012,72(4):612-624. |
| [49] | WILSON Z A, MORROLL S M, DAWSON J, SWARUP R, TIGHE P J . The Arabidopsis MALE STERILITY1 (MS1) gene is a transcriptional regulator of male gametogenesis, with homology to the PHD-finger family of transcription factors. Plant Journal, 2001,28(1):27-39. |
| [50] | SORENSEN A M, KRÖBER S, UNTE U S, HUIJSER P, DEKKER K, SAEDLER H . The Arabidopsis ABORTED MICROSPORES (AMS) gene encodes a MYC class transcription factor. Plant Journal, 2003,33(2):413-423. |
| [51] | XU J, DING Z W, VIZCAY-BARRENA G, SHI J X, LIANG W Q, YUAN Z, WERCK-REICHHART D, SCHREIBER L, WILSON Z A, ZHANG D B . ABORTED MICROSPORES acts as a master regulator of pollen wall formation in Arabidopsis. The Plant Cell, 2014,26(4):1544-1556. |
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