中国农业科学 ›› 2021, Vol. 54 ›› Issue (13): 2699-2709.doi: 10.3864/j.issn.0578-1752.2021.13.001

• 作物遗传育种·种质资源·分子遗传学 • 上一篇    下一篇

利用CRISPR/Cas9技术定向编辑水稻OsIAA11

李兆伟1(),零东兰1,孙聪颖1,曾慧玲1,刘凯基1,蓝颖珊1,范凯2,林文雄1()   

  1. 1福建农林大学生命科学学院,福州 350002
    2福建农林大学农学院,福州 350002
  • 收稿日期:2020-12-03 修回日期:2021-01-21 出版日期:2021-07-01 发布日期:2021-07-12
  • 通讯作者: 林文雄
  • 作者简介:李兆伟,E-mail: lizw197@163.com
  • 基金资助:
    国家自然科学基金(31701329);中国博士后科学基金(2015M580560)

CRISPR/Cas9 Targeted Editing of OsIAA11 in Rice

LI ZhaoWei1(),LING DongLan1,SUN CongYing1,ZENG HuiLing1,LIU KaiJi1,LAN YingShan1,FAN Kai2,LIN WenXiong1()   

  1. 1College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002
    2College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou 350002
  • Received:2020-12-03 Revised:2021-01-21 Online:2021-07-01 Published:2021-07-12
  • Contact: WenXiong LIN

摘要:

【目的】OsIAA11参与的生长素信号途径在水稻生长发育阶段和环境因子响应中起重要作用,并影响水稻生育后期的产量形成过程。利用CRISPR/Cas9编辑技术对粳稻中花11(ZH11)的OsIAA11序列进行编辑,获得OsIAA11突变植株,通过对突变植株的农艺性状指标开展田间调查分析,以期探索OsIAA11突变对水稻产量构成因子的影响。【方法】依据CRISPR/Cas9编辑原理,在OsIAA11第1和第2外显子区域设计2个20 bp的编辑靶点,并在水稻基因组数据库中比对分析靶点序列,排除非特异性编辑,将2个靶点核苷酸片段分别与pYLgRNA-U6a和pYLgRNA-U6b载体连接,通过2次PCR扩增,得到含特异性连接接头的U6a-IAA11-T1和U6b-IAA11-T2表达盒,再将2个表达盒连接到pYLCRISPR/Cas9-MT载体上,获得pYLCRISPR/Cas9-IAA11-T12重组表达载体,利用农杆菌介导法转化ZH11愈伤组织,再生培养得到T0代转基因幼苗,通过PCR扩增潮霉素抗性基因获得阳性株系。对T2代植株的靶点区域序列进行PCR扩增和测序分析,鉴定OsIAA11突变类型,并考察突变植株的田间农艺性状。【结果】pYLCRISPR/Cas9-IAA11-T12表达载体成功转化ZH11水稻愈伤组织,并获得25株转基因再生植株,经潮霉素鉴定得到20株阳性株系,从阳性植株的T2后代中鉴定出17种在2个靶点区域都发生编辑的纯合突变类型植株,除osiaa11-20-1osiaa11-21-2osiaa11-23osiaa11-25在第1个靶点、以及osiaa11-22-2在第2个靶点是单碱基插入突变外,其他突变植株在第1个靶点为小片段缺失突变,在第2个靶点多为单碱基缺失突变。对17种不同基因型osiaa11突变体的农艺性状调查表明,与野生型水稻相比,突变体水稻的株高、有效穗数、穗长、穗粒数、结实率、千粒重、收获指数以及谷草比等性状未发生明显变化,而分蘖成穗率则显著降低,表明无效分蘖增多。【结论】采用CRISPR/Cas9技术对OsIAA11序列进行编辑,得到17种不同基因型的osiaa11突变体水稻,其分蘖成穗率显著降低,无效分蘖变多,表明OsIAA11参与了生长素对分蘖芽发生的调节代谢。

关键词: 水稻, 基因编辑, OsIAA11, CRISPR/Cas9技术, osiaa11突变体

Abstract:

【Objective】Auxin signaling pathway regulated by OsIAA11 plays an important role in the plant growth and response to various environment stresses, impacting on the final grain yield during the late stage. To explore the effect of OsIAA11 mutation on the yield, the OsIAA11 mutant plant was obtained using CRISPR/Cas9 system, and the agronomic characters of mutant plants were investigated in the field. 【Method】According to the principle of CRISPR/Cas9 technology, two 20 bp targeted sequences were designed in the first exon and second exon of the OsIAA11 genome sequence. The gene shuffling of non-specific target sites was eliminated using the blast analysis. The oligonucleotides of two target sites were inserted into the pYLgRNA-U6a and pYLgRNA-U6b plasmid vector, and then were amplified twice by PCR technology to construct U6a-IAA11-T1 and U6b-IAA11-T2 expression-boxes. The recombinant pYLCRISPR/Cas9-IAA11-T12 vector was obtained by linking two expression-boxes to pYLCRISPR/Cas9-MT vector. The pYLCRISPR/Cas9-IAA11-T12 vector was transformed into the callus ofjaponica rice ZH11 through Agrobacterium-mediated method. The T0 generation of transgenic plants was obtained by tissue culture, and the positive transgenic plants were selected through PCR method. The target sites of each T2 generation from T0 positive plants were determined via PCR and sequencing method, and finally the mutated genotypes were identified. Meanwhile, agronomic traits of the T2 generation were investigated in the field. 【Result】The pYLCRISPR/Cas9-IAA11-T12 expression vector was successfully transformed into the callus of ZH11. 25 transgenic lines were obtained, and 20 transgenic lines were identified as the positive plants. After analysis of T 2 transgenic plants via PCR and sequencing the target locus, 17 different homozygous mutations were identified in the two target sites of the OsIAA11 genomic sequence. Except for the single base insertion mutation of osiaa11-20-1, osiaa11-21-2, osiaa11-23, and osiaa11-25 in target 1 and osiaa11-22-2 in target 2, other genotypes mainly deleted small fragment base in target 1 and mutated a single base in target 2. Agronomic traits results showed that 17 osiaa11 mutants did not present a significant difference in plant height, panicle length, grain number per panicle, seed setting rate, 1000-grain weight, harvest index, and grain-straw ratio in comparison with the wild type. However, the osiaa11 displayed a significant decrease in effective spike rate, suggesting a more ineffective tiller phenotype. 【Conclusion】CRISPR/Cas9 technology successfully editedOsIAA11 and 17 different homozygous mutations genotypes were obtained. The mutant showed the reduced effective spike rate and increased ineffective tillers, indicating that OsIAA11 was related to the tiller bud appearance dominated by auxin.

Key words: rice, gene editing, OsIAA11, CRISPR/Cas9 technology, osiaa11 mutant