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Detection of maize tassels for UAV remote sensing image with an improved YOLOX Model
SONG Chao-yu, ZHANG Fan, LI Jian-sheng, XIE Jin-yi, YANG Chen, ZHOU Hang, ZHANG Jun-xiong
2023, 22 (6): 1671-1683.   DOI: 10.1016/j.jia.2022.09.021
Abstract361)      PDF in ScienceDirect      

Maize tassel detection is essential for future agronomic management in maize planting and breeding, with application in yield estimation, growth monitoring, intelligent picking, and disease detection.  However, detecting maize tassels in the field poses prominent challenges as they are often obscured by widespread occlusions and differ in size and morphological color at different growth stages.  This study proposes the SEYOLOX-tiny Model that more accurately and robustly detects maize tassels in the field.  Firstly, the data acquisition method ensures the balance between the image quality and image acquisition efficiency and obtains maize tassel images from different periods to enrich the dataset by unmanned aerial vehicle (UAV).  Moreover, the robust detection network extends YOLOX by embedding an attention mechanism to realize the extraction of critical features and suppressing the noise caused by adverse factors (e.g., occlusions and overlaps), which could be more suitable and robust for operation in complex natural environments.  Experimental results verify the research hypothesis and show a mean average precision (mAP@0.5) of 95.0%.  The mAP@0.5, mAP@0.5–0.95, mAP@0.5–0.95 (area=small), and mAP@0.5–0.95 (area=medium) average values increased by 1.5, 1.8, 5.3, and 1.7%, respectively, compared to the original model.  The proposed method can effectively meet the precision and robustness requirements of the vision system in maize tassel detection.

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Optimizing water management practice to increase potato yield and water use efficiency in North China
LI Yang, WANG Jing, FANG Quan-xiao, HU Qi, HUANG Ming-xia, CHEN Ren-wei, ZHANG Jun, HUANG Bin-xiang, PAN Zhi-hua, PAN Xue-biao
2023, 22 (10): 3182-3192.   DOI: 10.1016/j.jia.2023.04.027
Abstract141)      PDF in ScienceDirect      

Potato is one of the staple food crops in North China.  However, potato production in this region is threatened by the low amount and high spatial-temporal variation of precipitation.  Increasing yield and water use efficiency (WUE) of potato by various water management practices under water resource limitation is of great importance for ensuring food security in China.  However, the contributions of different water management practices to yield and WUE of potato have been rarely investigated across North China’s potato planting region.  Based on meta-analysis of field experiments from the literature and model simulation, this study quantified the potential yields of potatoes without water and fertilizer limitation, and yield under irrigated and rainfed conditions, and the corresponding WUEs across four potato planting regions including the Da Hinggan Mountains (DH), the Foothills of Yanshan hilly (YH), the North foot of the Yinshan Mountains (YM), and the Loess Plateau (LP) in North China.  Simulated average potential potato tuber dry weight yield by the APSIM-Potato Model was 12.4 t ha–1 for the YH region, 11.4 t ha–1 for the YM region, 11.2 t ha–1 for the DH region, and 10.7 t ha–1 for the LP region, respectively.  Observed rainfed potato tuber dry weight yield accounted for 61, 30, 28 and 24% of the potential yield in the DH, YH, YM, and LP regions.  The maximum WUE of 2.2 kg m–3 in the YH region, 2.1 kg m–3 in the DH region, 1.9 kg m–3 in the YM region and 1.9 kg m–3 in the LP region was achieved under the potential yield level.  Ridge-furrow planting could boost yield by 8–49% and WUE by 2–36% while ridge-furrow planting with film mulching could boost yield by 35–89% and WUE by 7–57% across North China.  Our study demonstrates that there is a large potential to increase yield and WUE simultaneously by combining ridge-furrow planting with film mulching and supplemental irrigation in different potato planting regions with limited water resources.

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Dek219 encodes the DICER-LIKE1 protein that affects chromatin accessibility and kernel development in maize
XIE Si-di, TIAN Ran, ZHANG Jun-jie, LIU Han-mei, LI Yang-ping, HU Yu-feng, YU Guo-wu, HUANG Yu-bi, LIU Ying-hong
2023, 22 (10): 2961-2980.   DOI: 10.1016/j.jia.2023.02.024
Abstract369)      PDF in ScienceDirect      

Chromatin accessibility plays a vital role in gene transcriptional regulation.  However, the regulatory mechanism of chromatin accessibility, as well as its role in regulating crucial gene expression and kernel development in maize (Zea mays) are poorly understood.  In this study, we isolated a maize kernel mutant designated as defective kernel219 (dek219), which displays opaque endosperm and embryo abortion.  Dek219 encodes the DICER-LIKE1 (DCL1) protein, an essential enzyme in miRNA biogenesis.  Loss of function of Dek219 results in significant reductions in the expression levels of most miRNAs and histone genes.  Further research showed that the Heat shock transcription factor17 (Hsf17)-Zm00001d016571 module may be one of the factors affecting the expression of histone genes.  Assay results for transposase-accessible chromatin sequencing (ATAC-seq) indicated that the chromatin accessibility of dek219 is altered compared with that of wild type (WT), which may regulate the expression of crucial genes in kernel development.  By analyzing differentially expressed genes (DEGs) and differentially accessible chromatin regions (ACRs) between WT and dek219, we identified 119 candidate genes that are regulated by chromatin accessibility, including some reported to be crucial genes for kernel development.  Taken together, these results suggest that Dek219 affects chromatin accessibility and the expression of crucial genes that are required for maize kernel development

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Proteomic analysis of pathogen-responsive proteins from maize stem apoplast triggered by Fusarium verticillioides
Hafiz ABDUL HASEEB, ZHANG Jun, GUO Yu-shuang, GAO Mei-xu, GUO Wei
2022, 21 (2): 446-459.   DOI: 10.1016/S2095-3119(21)63657-2
Abstract166)      PDF in ScienceDirect      
During the attack of a pathogen, a variety of defense-associated proteins are released by the host plant in the apoplast to impede the perceived attack.  This study utilized the mass spectrometry (LC-MS/MS) and label-free quantification method to analyze the apoplastic fluid (APF) from maize stalk and identified the proteins responsive to the Fusarium verticillioides infection.  We have identified 742 proteins, and among these, 119 proteins were differentially accumulated (DAPs), i.e., 35 up-regulated, 18 down-regulated, and 66 proteins were only induced by the pathogen infection.  The differentially accumulated proteins were analyzed for their Gene Ontology (GO) and Kyoto Encyclopedia of Gene and Genomes (KEGG) pathway enrichment.  The highly enriched Biological Process (BP) term was the L-serine biosynthesis process, whereas the most enriched Molecular Function (MF) term was the cysteine-type endopeptidase inhibitor activity.  It was also found that the pathways related to the biosynthesis of amino acid, biosynthesis of secondary metabolites, protein processing in the endoplasmic reticulum, and carbohydrate metabolic pathways were significantly enriched.  Moreover, 61 out of 119 differentially accumulated proteins were predicted as secretory proteins.  The secretory pathways analysis showed that a greater number of proteins were secreted through the conventional secretion system compared to the unconventional secretion system.  The identified secreted proteins were related to a variety of pathways in defense responses including cell redox homeostasis, cell wall modification, signal transduction, carbohydrate metabolism, binding proteins (metal ion binding, RNA binding and heme-binding), maintenance and stabilization of other proteins, indicating a complex response from the plant to the fungal infection.  Our data suggested that a number of host proteins belonging to various pathways have been modulated in the apoplastic region.
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Fractionation of soil organic carbon in a calcareous soil after long-term tillage and straw residue management
LI Teng-teng, ZHANG Jiang-zhou, ZHANG Hong-yan, Chrisite PHRISITE, ZHANG Jun-ling
2022, 21 (12): 3611-3625.   DOI: 10.1016/j.jia.2022.08.072
Abstract162)      PDF in ScienceDirect      

No tillage (NT) and straw return (S) collectively affect soil organic carbon (SOC).  However, changes in the organic carbon pool have been under-investigated.  Here, we assessed the quantity and quality of SOC after 11 years of tillage and straw return on the North China Plain.  Concentrations of SOC and its labile fractions (particulate organic carbon (POC), potassium permanganate-oxidizable organic carbon (POXC), microbial biomass carbon (MBC) and dissolved organic carbon (DOC)), components of DOC by fluorescence spectroscopy combined with parallel factor analysis (PARAFAC) and the chemical composition of SOC by 13C NMR spectroscopy were explored.  Treatments comprised conventional tillage (CT) and NT under no straw return (S0), return of wheat straw only (S1) or return of both wheat straw and maize residue (S2).  Straw return significantly increased the concentrations and stocks of SOC at 0-20 cm depth but no tillage stratified them with enrichment at 0-10 cm and a decrease at 10-20 cm in comparison to CT, especially under S2.  Labile C fractions showed similar patterns of variation to that of SOC, with POC and POXC more sensitive to straw return and the former more sensitive to tillage.  Six fluorescence components of DOC were identified comprising mostly humic-like substances with smaller amounts of fulvic acid-like substances and tryptophan. Straw return significantly decreased the fluorescence index (FI) and autochthonous index (BIX) and increased the humification index (HIX).  No tillage generally increased HIX in topsoil but decreased it and increased the FI and BIX below the topsoil.  The chemical composition of SOC was: O-alkyl C>alkyl-C>aromatic-C>carbonyl-C.  Overall, NT under S2 effectively increased SOC and its labile C forms and DOC humification in topsoil and microbially-derived DOC below the topsoil.  Return of both wheat and maize straw was a particularly strong factor for promoting soil organic carbon in the plough layer, and the stratification of SOC under no tillage may confer long-term influence on carbon sequestration.

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Effect of harvest time on the chemical composition and antioxidant capacity of Gannan navel orange (Citrus sinensis L. Osbeck ‘Newhall’) juice
ZHANG Jun, ZHANG Jing-yi, SHAN You-xia, GUO Can, HE Lian, ZHANG Lin-yan, LING Wei, LIANG Yan, ZHONG Ba-lian
2022, 21 (1): 261-272.   DOI: 10.1016/S2095-3119(20)63395-0
Abstract260)      PDF in ScienceDirect      
The present study investigates the chemical composition and antioxidant capacity of juice from the Gannan navel orange, which is harvested at one- to two-week intervals during the ripening period.  The total soluble solid (TSS), total polyphenol content (TPC), total flavonoid content (TFC), sucrose and hesperidin contents gradually increase with the ripening of the fruit, followed by slight declines at the late maturity stage.  Contrary to these observations, the contents of titratable acid (TA), vitamin C (Vc), and limonin trend downward throughout the ripening period.  However, the contents of fructose, glucose, and narirutin fluctuate throughout the harvest time.  Three in vitro antioxidant assays consistently indicate that the harvest time exerts no significant influence (P>0.01) on the antioxidant capacity.  Furthermore, principal component analysis (PCA) and Pearson’s correlation test are performed to provide an overview of the complete dataset. This study provides valuable information for evaluating the fruit quality and determining when to harvest the fruit in order to meet the preferences of consumers.  Meanwhile, our observations suggest that the fruits subjected to juice processing should be harvested at the late maturity stage to alleviate the “delayed bitterness” problem without compromising the antioxidant capacity and the flavonoid content in the juice.
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Effects of temperature and solar radiation on yield of good eating-quality rice in the lower reaches of the Huai River Basin, China
ZHOU Nian-bing, ZHANG jun, FANG Shu-liang, WEI Hai-yan, ZHANG Hong-cheng
2021, 20 (7): 1762-1774.   DOI: 10.1016/S2095-3119(20)63561-4
Abstract142)      PDF in ScienceDirect      
We studied the effects of temperature and solar radiation on rice yield with the aim of understanding the temperature and solar radiation requirements for high yield rice production in the lower reaches of the Huai River, China.  Field experiments were conducted with two medium-maturing japonica rice (MMJR) varieties and four late-maturing japonica rice (LMJR) varieties in 2017 and 2018.  Seeds were sown on May 10 (T1), May 17 (T2), May 24 (T3), May 31 (T4), June 7 (T5), June 14 (T6), and June 21 (T7).  The whole growth duration (WGD) of rice was shortened when sowing date was delayed, especially for the duration from sowing to heading (S–H).  The effective accumulated temperature (EAT), mean daily temperature (Tmean), cumulative solar radiation (CSR), and mean daily solar radiation (Rmean) over the WGD decreased when sowing date was delayed.  Compared with T1, yields in T2, T3, T4, T5, T6, and T7 decreased by 0.12–0.35, 0.45–0.89, 0.74–1.56, 1.41–2.24, 2.16–2.90, and 2.69–3.64 t ha−1, respectively.  There was a significant positive correlation between rice yield and EAT in different growth stages.  Temperature was the main factor that affected the yield of good eating-quality rice in the lower reaches of the Huai River.  We found that a relatively high yield can be obtained when the optimal Tmean for medium-maturing japonica rice (MMJR) and late-maturing japonica rice (LMJR) was 25.8–27.0°C and 26.6–27.1°C in the stages from sowing to heading (S–H), and 20.3–23.3°C and 20.3–22.1°C in the stages from heading to maturity (H–M), respectively.  The optimal sowing dates for MMJR and LMJR in the lower reaches of the Huai River were May 15–31 and May 15–18, respectively.
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Increasing photosynthetic performance and post-silking N uptake by moderate decreasing leaf source of maize under high planting density
CAO Yu-jun, WANG Li-chun, GU Wan-rong, WANG Yong-jun, ZHANG Jun-hua
2021, 20 (2): 494-510.   DOI: 10.1016/S2095-3119(20)63378-0
Abstract103)      PDF in ScienceDirect      
To date, little attention has been paid to the effects of leaf source reduction on photosynthetic matter production, root function and post-silking N uptake characteristics at different planting densities. In a 2-year field experiment, Xianyu 335, a widely released hybrid in China, was planted at 60 000 plants ha–1 (conventional planting density, CD) and 90 000 plants ha–1 (high planting density, HD), respectively. Until all the filaments protruded from the ear, at which point the plants were subjected to the removal of 1/2 (T1), 1/3 (T2) and 1/4 (T3) each leaf length per plant, no leaf removal served as the control (CK). We evaluated the leaf source reduction on canopy photosynthetic matter production and N accumulation of different planting densities. Under CD, decreasing leaf source markedly decreased photosynthetic rate (Pn), effective quantum yield of photosystem II (ΦPSII) and the maximal efficiency of photosystem II photochemistry (Fv/Fm) at grain filling stage, reduced post-silking dry matter accumulation, harvest index (HI), and the yield. Compared with the CK, the 2-year average yields of T1, T2 and T3 treatments decreased by 35.4, 23.8 and 8.3%, respectively. Meanwhile, decreasing leaf source reduced the root bleeding sap intensity, the content of soluble sugar in the bleeding sap, post-silking N uptake, and N accumulation in grain. The grain N accumulation in T1, T2 and T3 decreased by 26.7, 16.5 and 12.8% compared with CK, respectively. Under HD, compared to other treatments, excising T3 markedly improved the leaf Pn, ΦPSII and Fv/Fm at late-grain filling stage, increased the post-silking dry matter accumulation, HI and the grain yield. The yield of T3 was 9.2, 35.7 and 20.1% higher than that of CK, T1 and T2 on average, respectively. The T3 treatment also increased the root bleeding sap intensity, the content of soluble sugar in the bleeding sap and post-silking N uptake and N accumulation in grain. Compared with CK, T1 and T2 treatments, the grain N accumulation in T3 increased by 13.1, 40.9 and 25.2% on average, respectively. In addition, under the same source reduction treatment, the maize yield of HD was significantly higher than that of CD. Therefore, planting density should be increased in maize production for higher grain yield. Under HD, moderate decreasing leaf source improved photosynthetic performance and increased the post-silking dry matter accumulation and HI, and thus the grain yield. In addition, the improvement of photosynthetic performance improved the root function and promoted post-silking N uptake, which led to the increase of N accumulation in grain.
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Increased ammonification, nitrogenase, soil respiration and microbial biomass N in the rhizosphere of rice plants inoculated with rhizobacteria
ZHANG Jun-hua, HUANG Jing, Sajid HUSSAIN, ZHU Lian-feng, CAO Xiao-chuang, ZHU Chun-quan, JIN Qian-yu, ZHANG Hui
2021, 20 (10): 2781-2796.   DOI: 10.1016/S2095-3119(20)63454-2
Abstract151)      PDF in ScienceDirect      
Azospirillum brasilense and Pseudomonas fluorescens are well-known plant growth promoting rhizobacteria.  However, the effects of A. brasilense and P. fluorescens on the N cycles in the paddy field and rice plant growth are little known.  This study investigated whether and how A. brasilense and P. fluorescens contribute to the N transformations and N supply capacities in the rhizosphere, and clarified the effects of A. brasilense and P. fluorescens on the N application rate in rice cultivation.  Inoculations with A. brasilense and P. fluorescens coupled with N application rate trials were conducted in the paddy field in 2016 and 2017.  The inoculations of rice seedlings included four treatments: sterile saline solution (M0), A. brasilense (Mb), P. fluorescens (Mp), and co-inoculation with a mixture of A. brasilense and P. fluorescens (Mbp).  The N application rate included four levels: 0 kg N ha–1 (N0), 90 kg N ha–1 (N90), 180 kg N ha–1 (N180), and 270 kg N ha–1 (N270).  The results indicated that the Mbp and Mp treatments significantly enhanced the ammonification activities in the rhizosphere compared with the M0 treatment, especially for higher N applications, while the Mbp and Mb treatments greatly enhanced the nitrogenase activities in the rhizosphere compared with the M0 treatments, especially for lower N applications.  Azospirillum brasilense and P. fluorescens did not participate in the nitrification processes or the denitrification processes in the soil.  The soil respiration rate and microbial biomass N were greatly affected by the interactions between the rhizobacteria inoculations and the N fertilizer applications.  In the Mbp treatment, N supply capacities and rice grain yields showed no significant differences among the N90, N180, and N270 applications.  The N application rate in the study region can be reduced to 90 kg N ha–1 for  rice seedlings co-inoculated with a mixture of A. brasilense and P. fluorescens.
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Liming reduces soil phosphorus availability but promotes yield and P uptake in a double rice cropping system
LIAO Ping, Mart B. H. ROS, Natasja VAN GESTEL, SUN Yan-ni, ZHANG Jun, HUANG Shan, ZENG Yong-jun, WU Zi-ming, Kees Jan VAN GROENIGEN
2020, 19 (11): 2807-2814.   DOI: 10.1016/S2095-3119(20)63222-1
Abstract88)      PDF in ScienceDirect      
Liming is often applied to alleviate soil acidification and increase crop yield on acidic soils, but its effect on soil phosphorus (P) availability is unclear, particularly in rice paddies.  The objective of this study was to examine the effect of liming on rice production, yield and P uptake in a three-year field experiment in a double rice cropping system in subtropical China.  We also conducted an incubation experiment to investigate the direct effect of liming on soil available P and phosphatase activities on paddy soils in the absence of plants.  In the incubation experiment, liming reduced soil P availability (measured as Olsen-extractable P) by 14–17% and inhibited the activity of soil acid phosphatase.  Nonetheless, lime application increased grain yield, biomass, and P uptake in the field.  Liming increased grain yield and P uptake more strongly for late rice (26 and 21%, respectively) than for early rice (15 and 8%, respectively).  Liming reduced the concentration of soil available P in the field as well, reflecting the increase in rice P uptake and the direct negative effect of liming on soil P availability.  Taken together, these results suggest that by stimulating rice growth, liming can overcome direct negative effects on soil P availability and increase plant P uptake in this acidic paddy soil where P is not the limiting factor.
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Integrating transcriptomic and proteomic analyses of photoperiodsensitive in near isogenic maize line under long-day conditions
SONG Xiao-heng, TIAN Lei, WANG Shun-xi, ZHOU Jin-long, ZHANG Jun, CHEN Zan, WU Liu-ji, KU Li-xia, CHEN Yan-hui
2019, 18 (6): 1211-1221.   DOI: 10.1016/S2095-3119(18)62040-4
Abstract229)      PDF in ScienceDirect      
As a short-day plant species, maize requires an optimal photoperiod for inducing reproductive growth. However, there is a lack of information regarding photoperiod-induced changes in maize mRNA and protein levels. In this study, a photoperiod-insensitive maize inbred line and its near isogenic photoperiod-sensitive line were used. By integrating RNAbased transcriptomic and iTRAQ LC-MS/MS-based proteomic approaches, we generated a comprehensive inventory of the transcripts and proteins with altered abundances in response to a long photoperiod (LP) during growth stage transitions. We detected 22 000 transcripts in RNA-sequence runs and 5 259 proteins from an iTRAQ-based analysis. A weak correlation between mRNA- and protein-level changes was observed, suggesting the LP-induced transition between maize growth stages is largely regulated post-transcriptionally. Differentially expressed genes influenced by LP conditions were associated with several regulatory processes in both maize inbred lines, especially phosphate ion transport and the circadian rhythm. Additionally, 31 transcripts and six proteins related to photoperiodic flowering in maize were identified by comparing transcriptomic and proteomic data. This transcriptomic and proteomic analysis represents the first comprehensive and comparative study of gene/protein-level changes occurring in photoperiod-sensitive and -insensitive maize inbred lines
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Gene mapping and candidate gene analysis of multi-floret spikelet 3 (mfs3) in rice (Oryza sativa L.)
ZHENG Hao, ZHANG Jun, ZHUANG Hui, ZENG Xiao-qin, TANG Jun, WANG Hong-lei, CHEN Huan, LI Yan, LING Ying-hua, HE Guang-hua, LI Yun-feng
2019, 18 (12): 2673-2681.   DOI: 10.1016/S2095-3119(19)62652-3
Abstract164)      PDF in ScienceDirect      
Rice (Oryza sativa L.) is one of the most important food crops worldwide and a model monocot plant for gene function analysis, so it is an ideal system for studying flower development.  This study reports a mutant, named multi-floret spikelet 3 (mfs3), which is related to the spikelet development in rice and derived from the ethylmethane sulfonate (EMS)-treated rice cultivar XIDA 1B.  In mfs3, the main body of palea (bop) was degenerated severely and only glume-like marginal regions of palea (mrp) remained, while other floral organs developed normally, indicating that the palea identity was seriously influenced by the mutation.  It was also observed that the number of floral organs was increased in some spikelets, including 2 lemmas, 4 mrp, 4 lodicules, 8–10 stamens, and 2 pistils, which meant that the spikelet determinacy was lost to some degree in mfs3.  Furthermore, genetic analysis demonstrated that the mfs3 trait was controlled by a single recessive gene.  Using 426 F2 mutants derived from the cross between sterile line 56S and mfs3, the MULTI-FLORET SPIKELET 3 (MFS3) gene was mapped between the molecular markers RM19347 and RM19352 on Chr.6, with a physical distance of 106.3 kb.  Sequencing of candidate genes revealed that an 83-bp fragment loss and a base substitution occurred in the LOC_Os06g04540 gene in the mutant, confirming preliminarily that the LOC_Os06g04540 gene was the MFS3 candidate gene.  Subsequent qPCR analysis showed that the mutation caused the down-regulation of OsMADS1 and FON1 genes, and the up-regulation of OsIDS1 and SNB genes, which are all involved in the regulation of spikelet development.  The MFS3 mutation also significantly reduced the transcription of the REP gene, which is involved in palea development.  These results indicated that the MFS3 gene might be involved in the spikelet meristem determinacy and palea identity by regulating the expression of these related genes.
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Baculovirus-expressed FAdV-4 penton base protein protects chicken against hepatitis-hydropericardium syndrome
ZHANG Jun-qin, WEI Yan-ming, HUANG Kun, SUN Xiao-mei, ZOU Zhong, JIN Mei-lin
2019, 18 (11): 2598-2604.   DOI: 10.1016/S2095-3119(19)62739-5
Abstract87)      PDF in ScienceDirect      
Hepatitis-hydropericardium syndrome (HHS) is an infectious disease caused by fowl adenovirus serotype 4 (FAdV-4).  Several structural and non-structural proteins of FAdV-4 have been expressed in Escherichia coli and baculovirus expression system to develop candidate subunit vaccines.  However, the protective efficiency of baculovirus-expressed penton base protein has not been assessed.  In this study, two recombinant capsid proteins, penton base and fiber-2, were constructed.  And then, penton base and fiber-2 were administrated alone or together to specific pathogen-free (SPF) chickens at 14 days of life and boosted at 28 days of life.  At 42 days of life, the immunized groups and the control group were challenged with FAdV-4 virulent strain.  Results show that inoculating penton base or penton base+fiber-2 provided 100% protection to the chickens.  All groups vaccinated with the recombinant protein produced detectable antibodies and showed no apparent lesions.  Thus, baculovirus-expressed penton base protein is a promising candidate subunit vaccine.
 
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Influence of drought hardening on the resistance physiology of potato seedlings under drought stress
ZHANG Shu-han, XU Xue-feng, SUN Ye-min, ZHANG Jun-lian, LI Chao-zhou
2018, 17 (2): 336-347.   DOI: 10.1016/S2095-3119(17)61758-1
Abstract862)      PDF in ScienceDirect      
In this paper, the influence of drought hardening on the growth, development, resistance physiology, leaf microstructure and stomatal behavior of potato seedlings under drought stress was studied, and the mechanism of drought hardening improvement of potato seedling drought resistance was elucidated.  We found that drought stress had several adverse effects on potato seedlings, yet drought hardening alleviated the decrease in relative water content (RWC), net photosynthetic rate (Pn) and chlorophyll content and inhibited the increase in relative electric conductivity and malondialdehyde (MDA) content.  Compared with contrast seedlings, drought-hardened seedlings also had enhanced root vigor, increased antioxidant enzyme activity and higher levels of abscisic acid (ABA), proline (Pro), soluble sugars and polyamines (PAs) under drought stress.  In addition, the stomatal density of potato seedling leaves increased significantly, while the leaf area, stomatal size and stomatal aperture decreased with drought hardening treatment.  These changes led to reduced leaf transpiration rate (Tr) and improved water utilization efficiency (WUE).  The changes in leaf microstructure also had a positive effect on the drought resistance of the drought-hardened potato seedlings. So it can be concluded that through increasing the content of some endogenous hormones, osmotic regulatory substances and the activities of antioxidant enzymes, the resistance physiology of drought-hardened potato seedlings was enhanced. 
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Effects of salt stress on rice growth, development characteristics, and the regulating ways: A review
Sajid Hussain, ZHANG Jun-hua, ZHONG Chu, ZHU Lian-feng, CAO Xiao-chuang, YU Sheng-miao, Allen Bohr James, HU Ji-jie, JIN Qian-yu
2017, 16 (11): 2357-2374.   DOI: 10.1016/S2095-3119(16)61608-8
Abstract1113)      PDF in ScienceDirect      
Rice (Oryza sativa L.) is highly susceptible to the rhizosphere salinity than other cereals.  High sensitivity has been observed, mainly at vegetative and reproductive stages in rice.  It is the duty of plant physiologists to comprehend the growth, development, and physiological processes of rice plants under stress.  This paper includes the overview of rice growth and developmental processes influenced by salt stress and the regulation pathways involved in these processes.  It also includes the promising salt tolerance strategies, i.e., genetic modification techniques, agronomic practices to improve rice growth, yield, and role of phytohormones and their management, especially inhibition of ethylene biosynthesis by using inhibitors 1-methylcyclopropene (1-MCP).  Rice cultivation may be a first choice for improvement of salt tolerance through plant growth regulators and improved cultivation techniques.  This study will significantly improve the understanding toward low rice grain yield and poor rice resistance under salt stress and will also stream scientific knowledge for effective utilization of salt affected soils by using different regulating ways.  
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Mapping of the heading date gene HdAey2280 in Aegilops tauschii
LIU Guo-xiang, ZHANG Li-chao, XIA Chuan, JIA Ji-zeng, ZHANG Jun-cheng, ZHANG Qiang, DONG Chun-hao, KONG Xiu-ying, LIU Xu
2016, 15 (12): 2719-2725.   DOI: 10.1016/S2095-3119(15)61291-6
Abstract1016)      PDF in ScienceDirect      
    An optimum heading date is essential for sustainable crop productivity and ensuring high yields. In the present study, F2:3 populations were generated by crossing an early-heading accession, Y2280, with a late-heading accession, Y2282. The heading dates of the F2 and F3 populations were investigated in a field study. Using publicly available simple sequence repeat (SSR) markers, the early heading date gene HdAey2280 was mapped onto Aegilops tauschii chromosome 7DS between the flanking markers wmc438 and barc126 at distances of 15 and 9.1 cM, respectively. Further analysis indicated that HdAey2280 is a novel heading date gene. New SSR markers were developed based on the Ae. tauschii draft genome sequence, resulting in four new markers that were linked to the heading date gene HdAey2280. The closest distance of these markers was 1.9 cM away from the gene. The results collected in this study will serve as a framework for map-based cloning and marker-assisted selection in wheat breeding programs in the future.
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Research on Spatial-Temporal Characteristics and Driving Factor of Agricultural Carbon Emissions in China
TIAN Yun, ZHANG Jun-biao, HE Ya-ya
2014, 13 (6): 1393-1403.   DOI: 10.1016/S2095-3119(13)60624-3
Abstract1787)      PDF in ScienceDirect      
Macroscopic grasp of agricultural carbon emissions status, spatial-temporal characteristics as well as driving factors are the basic premise in further research on China’s agricultural carbon emissions. Based on 23 kinds of major carbon emission sources including agricultural materials inputs, paddy field, soil and livestock breeding, this paper firstly calculated agricultural carbon emissions from 1995 to 2010, as well as 31 provinces and cities in 2010 in China. We then made a decomposed analysis to the driving factors of carbon emissions with logarithmic mean Divisia index (LMDI) model. The results show: (1) The amount of agricultural carbon emissions is 291.1691 million t in 2010. Compared with 249.5239 million t in 1995, it increased by 16.69%, in which, agricultural materials inputs, paddy field, soil, enteric fermentation, and manure management accounted for 33.59, 22.03, 7.46, 17.53 and 19.39% of total agricultural carbon emissions, respectively. Although the amount exist ups and downs, it shows an overall trend of cyclical rise; (2) There is an obvious difference among regions: the amount of agricultural carbon emissions from top ten zones account for 56.68%, while 9.84 % from last 10 zones. The traditional agricultural provinces, especially the major crop production areas are the main source regions. Based on the differences of carbon emission rations, 31 provinces and cities are divided into five types, namely agricultural materials dominant type, paddy field dominant type, enteric fermentation dominant type, composite factors dominant type and balanced type. The agricultural carbon emissions intensity in west of China is the highest, followed by the central region, and the east zone is the lowest; (3) Compared with 1995, efficiency, labor and structure factors cut down carbon emissions by 65.78, 27.51 and 3.19%, respectively; while economy factor increase carbon emissions by 113.16%.
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Effects of Nitrogen Application Rate and Ratio on Lodging Resistance of Super Rice with Different Genotypes
ZHANG Wu-jun, LI Gang-hua, YANG Yi-ming, LI Quan, ZHANG Jun, LIU Jin-you, WANG Shao-hua, TANG She , DING Yan-feng
2014, 13 (1): 63-72.   DOI: 10.1016/S2095-3119(13)60388-3
Abstract2140)      PDF in ScienceDirect      
The objective of this study was to determine the morphology mechanism of nitrogen (N) fertilizer rates and ratio on lodging resistance through analying its effects among lodging index (LI), lodging-related morphological traits and physical strength in basal internodes by comparing japonica and indica super rice cultivars. Field experiments, with three nitrogen levels (0, 150 and 300 kg ha-1) and two ratios of basal to topdressing (8:2 and 5:5) with two super rice cultivars (Yliangyou 2 and Wuyunjing 23), were conducted in the Baolin Farm, Danyang Country, Jiangsu Province, China, in 2011 and 2012. Effects of N fertilizer rates and ratios on morphology of whole plant, morphology traits in basal internodes and culm’s physical strength parameters were investigated at 20 d after full heading stage. LI of Yliangyou 2 was significant greater than that of Wuyunjing 23 due to larger bending moment by whole plant (WP) with higher plant height and gravity center height. With higher volume of N fertilizer, LI of two super rice cultivars was increased conspicuously. However, no significant effect was detected with increase of panicle fertilizer ratio. The size of breaking strength (M) in basal internodes was the key factor determining LI among N fertilizer treatments. Correlation analysis revealed that M value was positively related bending stress (BS) of Wuyunjing 23 and section modulus (Z) of Yliangyou 2, respectively. The higher N fertilizer levels induced reduction of BS of Wuyunjing 23 due to weak culm and leaf sheath plumpness status and reduced Z of Yliangyou 2 owning to small diameter and culm wall thickness, consequently, influencing their M indirectly. These results suggested that breaking strength was the key factor influencing LI with increase of N fertilizer levels. However, the lodging-related morphology mechanism was different with genotypes. Culm wall thickness and diameter in basal internodes of indica super rice and culm and leaf sheath plumpness status of japonica super rice influenced breaking strength, as well as lodging index, respectively.
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Over-Expression of ScMnSOD, a SOD Gene Derived from Jojoba, Improve Drought Tolerance in Arabidopsis
LIU Xiao-fei, SUN Wei-min, LI Ze-qin, BAI Rui-xue, LI Jing-xiao, SHI Zi-han, GENG Hongwei, ZHENG Ying, ZHANG Jun , ZHANG Gen-fa
2013, 12 (10): 1722-1730.   DOI: 10.1016/S2095-3119(13)60404-9
Abstract1278)      PDF in ScienceDirect      
Jojoba (Simmondsia chinensis) is mainly distributed in desert, and the molecular mechanisms of jojoba in response to abiotic stress still remain elusive. In this paper, we cloned and characterized a SOD gene from jojoba named as ScMnSOD, and introduced into Arabidopsis to investigate its functions of responding to drought stress. The transgenic Arabidopsis showed an improvement in drought tolerance. Moreover, under a water deficit condition, the accumulation of reactive oxygen species (ROS) was remarkably decreased in the transgenic lines compared to the WT. Furthermore, the ScMnSOD promoter was cloned to the 5´-upstream of GUS coding region in a binary vector, and introduced into Arabidopsis. And results showed that ScMnSOD expression can be induced by drought, salt, ABA, and low temperature. In conclusion, ScMnSOD plays an important role in drought tolerance which is, at least partially, attributed to its role in ROS detoxification.
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Response Surface Optimization of Nigella glandulifera Freyn Seed Oil Yield by Supercritical Carbon Dioxide Extraction
ZHANG Jun-ping, HOU Xi-lin, YU Tian, LI Ying, DONG Hai-yan
2012, 12 (1): 151-158.   DOI: 10.1016/S1671-2927(00)8511
Abstract1412)      PDF in ScienceDirect      
Supercritical carbon dioxide (SC-CO2) extraction was employed to extract oil from Nigella glandulifera Freyn seed in this study. Response surface methodology (RSM) was applied to evaluate the effects of the process parameters (pressure, temperature, and CO2 flow rate) on oil yield of N. glandulifera seed. A Box-Behnken design was used to optimize the extraction parameters. The analysis of variance indicated that the linear coefficients of pressure and CO2 flow rate, the quadratic term coefficients of pressure and temperature and the interactions between pressure and temperature, as well as temperature and CO2 flow rate, had significant effects on the oil yield (P<0.05). The optimal conditions to obtain the maximum oil yield from N. glandulifera seed were pressure 30.84 MPa, temperature 40.57°C, and CO2 flow rate 22.00 L h-1. Under these optimal conditions, the yield of oil was predicted to be 38.19%. The validation experiment results agreed with the predicted values. The fatty acid composition of N. glandulifera seed oil extracted using SC-CO2 was compared with that of oil obtained by Soxhlet method. The results showed that the fatty acid compositions of oil extracted by the two methods were similar. Identification of oil compounds with gas chromatography-mass spectrometry (GC-MS) showed that the contents of unsaturated fatty acids linoleic acid (48.30%), oleic acid (22.28%) and saturated fatty acids palmitic acid (16.65%), stearic acid (4.17%) were the most abundant fatty acids in seed oil from N. glandulifera.
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