|
Ashikari M, Sakakibara H, Lin S, Yamamoto T, Takashi T,
Nishimura A, Angeles E R, Qian Q, Kitano H, Matsuoka M. 2005. Cytokinin oxidase
regulates rice grain production. Science, 309, 741–745.
Ashikari M, Wu J, Yano M, Sasaki T, Yoshimura A. 1999.
Rice gibberellin-insensitive dwarf mutant gene Dwarf 1 encodes
the α-subunit of GTP-binding protein. Proceedings of the National Academy of Sciences of the United States of America, 96, 10284–10289.
Beales J, Turner A, Griffiths S, Snape J W, Laurie D A.
2007. A pseudo-response regulator is misexpressed in the photoperiod
insensitive Ppd-D1a mutant of wheat (Triticum aestivum L.). Theoretical and Applied Genetics, 115,
721–733.
Bhusal N, Sarial A K, Sharma P, Sareen S. 2017. Mapping
QTLs for grain yield components in wheat under heat stress. PLoS ONE, 12, e0189594.
Börner A, Schumann E, Fürste A, Cöster H, Leithold B,
Röder M, Weber W. 2002. Mapping of quantitative trait loci determining
agronomic important characters in hexaploid wheat (Triticum aestivum L.). Theoretical and Applied Genetics, 105,
921–936.
Cao S H, Xu D, Hanif M, Xia X, He Z H. 2020. Genetic
architecture underpinning yield component traits in wheat. Theoretical and Applied Genetics, 133, 1811–1823.
Chen Y, Yan Y, Wu T T, Zhang G L, Yin H, Chen W, Wang S,
Chang F, Gou J Y. 2020. Cloning of wheat keto-acyl thiolase 2B reveals a role
of jasmonic acid in grain weight determination. Nature Communications, 11, 6266.
Cheng H, Liu J, Wen J, Nie X, Xu L, Chen N, Li Z, Wang Q,
Zheng Z, Li M, Cui L, Liu Z, Bian J, Wang Z, Xu S, Yang Q, Appels R, Han D,
Song W, Sun Q, et al. 2019. Frequent intra- and inter-species
introgression shapes the landscape of genetic variation in bread wheat. Genome Biology, 20, 136.
Cui F, Zhao C, Ding A, Li J, Wang L, Li X, Bao Y, Li J,
Wang H. 2014. Construction of an integrative linkage map and QTL mapping of
grain yield-related traits using three related wheat RIL populations. Theoretical and Applied Genetics, 127, 659–675.
Cui F, Zhao C, Li J, Ding A, Li X, Bao Y, Li J, Ji J,
Wang H. 2013. Kernel weight per spike: What contributes to it at the individual
QTL level? Molecular Breeding, 31, 265–278.
Dholakia B B, Ammiraju J S S, Singh H, Lagu M D, Roder M
S, Rao V S, Dhaliwal H S, Ranjekar P K, Gupta V S. 2003. Molecular marker
analysis of kernel size and shape in bread wheat. Plant Breeding, 122, 392–395.
Ellis M, Spielmeyer W, Gale K, Rebetzke G, Richards R.
2002. “Perfect” markers for the Rht-B1b and Rht-D1b dwarfing
genes in wheat. Theoretical and Applied Genetics, 105,
1038–1042.
FAO (Food and Agriculture Organization). 2015. Online
statistical database: Food balance. FAOSTAT (Food and Agriculture Organization
of the United Nations Statistical Database). [2015-12-2]. http://www.fao.org/faostat
Fujisawa Y, Kato T, Ohki S, Ishikawa A, Kitano H, Sasaki
T, Asahi T, Iwasaki Y. 1999. Suppression of the heterotrimeric G protein causes
abnormal morphology, including dwarfism, in rice. Proceedings of the National Academy of Sciences of the United States of America, 96, 7575–7580.
Gao F, Wen W, Liu J, Rasheed A, Yin G, Xia X, Wu X, He Z.
2015. Genome-wide linkage mapping of QTL for yield components, plant height and
yield-related physiological traits in the Chinese wheat cross Zhou 8425B/Chinese
Spring. Frontiers in Plant Science, 6,
1099–1115.
Geng J, Li L, Lv Q, Zhao Y, Liu Y, Zhang L, Li X. 2017. TaGW2-6A allelic variation contributes to grain size possibly by regulating the
expression of cytokinins and starch-related genes in wheat. Planta, 246,
1153–1163.
Guan P, Lu L, Jia L, Kabir M R, Zhang J, Lan T, Zhao Y,
Xin M, Hu Z, Yao Y, Ni Z, Sun Q, Peng H. 2018. Global QTL analysis identifies
genomic regions on chromosomes 4A and 4B harboring stable loci for
yield-related traits across different environments in wheat (Triticum aestivum L.). Frontiers in Plant Science, 9, 529.
Guo L, Ma M, Wu L, Zhou M, Li M, Wu B, Li L, Liu X, Jing
R, Chen W, Zhao H. 2022. Modified expression of TaCYP78A5 enhances grain
weight with yield potential by accumulating auxin in wheat (Triticum aestivum L.). Plant Biotechnology Journal, 20, 168–182.
Guo W, Xin M, Wang Z, Yao Y, Hu Z, Song W, Yu K, Chen Y,
Wang X, Guan P, Appels R, Peng H, Ni Z, Sun Q. 2020. Origin and adaptation to
high altitude of Tibetan semi-wild wheat. Nature Communications, 11,
5085.
Guo Z, Song Y, Zhou R, Ren Z, Jia J. 2010. Discovery,
evaluation and distribution of haplotypes of the wheat Ppd-D1 gene. New Phytologist, 185, 841–851.
Gupta A, Hua L, Lin G, Molnár I, Doležel J, Liu S, Li W.
2021. Multiple origins of Indian dwarf wheat by mutations targeting the TREE
domain of a GSK3-like kinase for drought tolerance, phosphate uptake, and grain
quality. Theoretical and Applied Genetics, 134,
633–645.
Hao C, Jiao C, Hou J, Li T, Liu H, Wang Y, Zheng J, Liu
H, Bi Z, Xu F, Zhao J, Ma L, Wang Y, Majeed U, Liu X, Appels R, Maccaferri M,
Tuberosa R, Lu H, Zhang X. 2020. Resequencing of 145 landmark cultivars reveals
asymmetric sub-genome selection and strong founder genotype effects on wheat
breeding in China. Molecular Plant, 13, 1733–1751.
Hu J, Wang X, Zhang G, Jiang P, Chen W, Hao Y, Ma X, Xu
S, Jia J, Kong L, Wang H. 2020. QTL mapping for yield-related traits in wheat
based on four RIL populations. Theoretical and Applied Genetics, 133, 917–933.
Huang K, Wang D, Duan P, Zhang B, Xu R, Li N, Li Y. 2017. WIDE AND THICK GRAIN 1, which encodes an
otubain-like protease with deubiquitination activity, influences grain size and
shape in rice. The Plant Journal, 91, 849–860.
Huang X Q, Cloutier S, Lycar L, Radovanovic N, Humphreys
D G, Noll J S, Somers D J, Brown P D. 2006. Molecular detection of QTLs for
agronomic and quality traits in a doubled haploid population derived from two
Canadian wheats (Triticum aestivum L.). Theoretical and Applied Genetics, 113, 753–766.
Isham K, Wang R, Zhao W, Wheeler J, Klassen N, Akhunov E,
Chen J. 2021. QTL mapping for grain yield and three yield components in a
population derived from two high-yielding spring wheat cultivars. Theoretical and Applied Genetics, 134, 2079–2095.
Ishimaru K, Hirotsu N, Madoka Y, Murakami N, Hara N,
Onodera H, Kashiwagi T, Ujiie K, Shimizu B I, Onishi A, Miyagawa H, Katoh E.
2013. Loss of function of the IAA-glucose hydrolase gene TGW6 enhances
rice grain weight and increases yield. Nature Genetics, 45,
707–711.
IWGSC (International Wheat Genome Sequencing Consortium).
2018. Shifting the limits in wheat research and breeding using a fully
annotated reference genome. Science, 36, eaar7191.
Ji G S, Xu Z B, Fan X L, Zhou Q, Chen L E, Yu Q, Liao S
M, Jiang C, Feng B, Wang T. 2022. Identification and validation of major QTL
for grain size and weight in bread wheat (Triticum aestivum L.). The Crop Journal, 11, 564–572.
Jia M, Li Y, Wang Z, Tao S, Sun G, Kong X, Wang K, Ye X,
Liu S, Geng S, Mao L, Li A. 2021. TaIAA21 represses TaARF25-mediated
expression of TaERFs required for grain size and weight development in
wheat. Plant Journal, 108, 1754–1767.
Kumar A, Mantovani E E, Seetan R, Soltani A,
Echeverry-Solarte M, Jain S, Simsek S, Doehlert D, Alamri M S, Elias E M,
Kianian S F, Mergoum M. 2016. Dissection of genetic factors underlying wheat
kernel shape and size in an elite × nonadapted cross using a high density SNP linkage
map. The Plant Genome, 9, 1.
Li F, Wen W, He Z, Liu J, Jin H, Cao S, Geng H, Yan J,
Zhang P, Wan Y, Xia X. 2018. Genome-wide linkage mapping of yield-related
traits in three Chinese bread wheat populations using high-density SNP markers. Theoretical and Applied Genetics, 131,
1903–1924.
Li N, Xu R, Li Y. 2019. Molecular networks of seed size
control in plants. Annual Review of Plant Biology, 70, 435–463.
Li T, Deng G, Su Y, Yang Z, Tang Y, Wang J, Zhang J, Qiu
X, Pu X, Yang W, Li J, Liu Z, Zhang H, Liang J, Yu M, Wei Y, Long H. 2022.
Genetic dissection of quantitative trait loci for grain size and weight by
high-resolution genetic mapping in bread wheat (Triticum aestivum L.). Theoretical and Applied Genetics, 135,
257–271.
Li Y, Fan C, Xing Y, Jiang Y, Luo L, Sun L, Shao D, Xu C,
Li X, Xiao J, He Y, Zhang Q. 2011. Natural variation in GS5 plays an
important role in regulating grain size and yield in rice. Nature Genetics, 43, 1266–1269.
Liao S M, Feng B, Xu Z B, Fan X L, Ji G S, Liu X F, Yu Q,
Wang T. 2022. Detection of QTLs for plant height in wheat based on the 55K SNP
array. Chinese Journal of Applied and Environmental Biology, 28, 576–581. (in Chinese)
Liu G, Jia L, Lu L, Qin D, Zhang J, Guan P, Ni Z, Yao Y,
Sun Q, Peng H. 2014. Mapping QTLs of yield-related traits using RIL population
derived from common wheat and Tibetan semi-wild wheat. Theoretical and Applied Genetics, 127, 2415–2432.
Liu H, Zhang X, Xu Y, Ma F, Zhang J, Cao Y, Li L, An D.
2020. Identification and validation of quantitative trait loci for kernel
traits in common wheat (Triticum aestivum L.). BMC Plant Biology, 20, 529.
Liu J, Chen J, Zheng X, Wu F, Lin Q, Heng Y, Tian P,
Cheng Z, Yu X, Zhou K, Zhang X, Guo X, Wang J, Wang H, Wan J. 2017. GW5 acts in the brassinosteroid signalling pathway to regulate grain width and
weight in rice. Nature Plants, 3, 17043.
Liu X F, Xu Z B, Feng B, Zhou Q, Ji G S, Guo S D, Liao S
M, Lin D, Fan X L, Wang T. 2022. Quantitative trait loci identification and
breeding value estimation of grain weight-related traits based on a new wheat
50K single nucleotide polymorphism array-derived genetic map. Frontiers in Plant Science, 13, 967432.
Liu Y, Lin Y, Gao S, Li Z, Ma J, Deng M, Chen G, Wei Y,
Zheng Y. 2017. A genome-wide association study of 23 agronomic traits in
Chinese wheat landraces. The Plant Journal, 91,
861–873.
Ma L, Li T, Hao C, Wang Y, Chen X, Zhang X. 2016. TaGS5-3A,
a grain size gene selected during wheat improvement for larger kernel and
yield. Plant Biotechnology Journal, 14, 1269–1280.
Mao H, Sun S, Yao J, Wang C, Yu S, Xu C, Li X, Zhang Q.
2010. Linking differential domain functions of the GS3 protein to
natural variation of grain size in rice. Proceedings of the National Academy of Science of United States of America, 107, 19579–19584.
Maphosa L, Langridge P, Taylor H, Parent B, Emebiri L C,
Kuchel H, Reynolds M P, Chalmers K J, Okada A, Edwards J, Mather D E. 2014.
Genetic control of grain yield and grain physical characteristics in a bread
wheat population grown under a range of environmental conditions. Theoretical and Applied Genetics, 127, 1607–1624.
Mohler V, Albrecht T, Castell A, Diethelm M, Schweizer G,
Hartl L. 2016. Considering causal genes in the genetic dissection of kernel
traits in common wheat. Journal of Applied Genetics, 57, 467–476.
Peng J, Richards D E, Hartley N M, Murphy G P, Devos K M,
Flintham J E, Beales J, Fish L J, Worland A J, Pelica F, Sudhakar D, Christou
P, Snape J W, Gale M D, Harberd N P. 1999. ‘Green revolution’ genes encode
mutant gibberellin response modulators. Nature, 400, 256–261.
Qu X R, Li C, Liu H, Liu J J, Luo W, Xu Q, Tang H P, Mu
Y, Deng M, Pu Z E, Ma J, Jiang Q T, Chen G Y, Qi P F, Jiang Y F, Wei Y M, Zheng
Y L, Lan X J, Ma J. 2022. Quick mapping and characterization of a co-located
kernel length and thousand-kernel weight-related QTL in wheat. Theoretical and Applied Genetics, 135, 2849–2860.
Qu X R, Liu J J, Xie X L, Xu Q, Tang H P, Mu Y, Pu Z E,
Li Y, Ma J, Gao Y T, Jiang Q, Liu Y, Chen G Y, Wang J, Qi P F, Habib A, Wei Y
M, Zheng Y L, Lan X J, Ma J. 2021. Genetic mapping and validation of loci for
kernel-related traits in wheat (Triticum aestivum L.). Frontiers in Plant Science, 12, 667493.
Ray D K, Mueller N D, West P C, Foley J A. 2013. Yield
trends are insufficient to double global crop production by 2050. PLoS ONE, 8, e66428.
Sakuma S, Golan G, Guo Z, Ogawa T, Tagiri A, Sugimoto K,
Bernhardt N, Brassac J, Mascher M, Hensel G, Ohnishi S, Jinno H, Yamashita Y,
Ayalon I, Peleg Z, Schnurbusch T, Komatsuda T. 2019. Unleashing floret fertility
in wheat through the mutation of a homeobox gene. Proceedings of the National Academy of Sciences of the United States of America, 116, 5182–5187.
Simmonds J, Scott P, Leverington-Waite M, Turner A S,
Brinton J, Korzun V, Snape J, Uauy C. 2014. Identification and independent
validation of a stable yield and thousand grain weight QTL on chromosome 6A of
hexaploid wheat (Triticum aestivum L.). BMC Plant Biology, 14, 191.
Smith S E, Kuehl R O, Ray I M, Hui R, Soleri D. 1998.
Evaluation of simple methods for estimating broad-sense heritability in stands
of randomly planted genotypes. Crop Science, 38,
1125–1129.
Song X J, Huang W, Shi M, Zhu M Z, Lin H X. 2007. A QTL
for rice grain width and weight encodes a previously unknown RING-type E3
ubiquitin ligase. Nature Genetics, 39, 623–630.
Su Z, Hao C, Wang L, Dong Y, Zhang X. 2011.
Identification and development of a functional marker of TaGW2 associated with grain weight in bread wheat (Triticum aestivum L.). Theoretical and Applied Genetics, 122,
211–223.
Sukumaran S, Lopes M, Dreisigacker S, Reynolds M. 2018.
Genetic analysis of multi-environmental spring wheat trials identifies genomic
regions for locus-specific trade-offs for grain weight and grain number. Theoretical and Applied Genetics, 131, 985–998.
Sun C, Dong Z, Zhao L, Ren Y, Zhang N, Chen F. 2020. The
Wheat 660K SNP array demonstrates great potential for marker-assisted selection
in polyploid wheat. Plant Biotechnology Journal, 18,
1354–1360.
Tanabe S, Ashikari M, Fujioka S, Takatsuto S, Yoshida S,
Yano M, Yoshimura A, Kitano H, Matsuoka M, Fujisawa Y, Kato H, Iwasaki Y. 2005.
A novel cytochrome P450 is implicated in brassinosteroid biosynthesis via the
characterization of a rice dwarf mutant, Dwarf11, with reduced seed
length. The Plant Cell, 17, 776–790.
Wang S, Wong D, Forrest K, Allen A, Chao S, Huang B E,
Maccaferri M, Salvi S, Milner S G, Cattivelli L, Mastrangelo A M, Whan A,
Stephen S, Barker G, Wieseke R, Plieske J, International Wheat Genome
Sequencing Consortium, Lillemo M, Mather D, Appels R, et al. 2014.
Characterization of polyploid wheat genomic diversity using a high-density
90000 single nucleotide polymorphism array. Plant Biotechnology Journal, 12, 787–796.
Wang W, Pan Q, Tian B, He F, Chen Y, Bai G, Akhunova A,
Trick H N, Akhunov E. 2019. Gene editing of the wheat homologs of TONNEAU1-recruiting
motif encoding gene affects grain shape and weight in wheat. The Plant Journal, 10, 251–264.
Wang X, Dong L, Hu J, Pang Y, Hu L, Xiao G, Ma X, Kong X,
Jia J, Wang H, Kong L. 2019. Dissecting genetic loci affecting grain
morphological traits to improve grain weight via nested association mapping. Theoretical and Applied Genetics, 132, 3115–3128.
Winfield M O, Allen A M, Burridge A J, Barker G L A,
Benbow H R, Wilkinson P A, Coghill J, Waterfall C, Davassi A, Scopes G, Pirani
A, Webster T, Brew F, Bloor C, King J, West C, Griffiths S, King I, Bentley A
R, Edwards K J. 2016. High-density SNP genotyping array for hexaploid wheat and
its secondary and tertiary gene pool. Plant Biotechnology Journal, 14, 1195–1206.
Xie G, Li Z, Ran Q, Wang H, Zhang J. 2018.
Over-expression of mutated ZmDA1 or ZmDAR1 gene improves maize
kernel yield by enhancing starch synthesis. Plant Biotechnology Journal, 16, 234–244.
Xin F, Zhu T, Wei S, Han Y, Zhao Y, Zhang D, Ma L, Ding
Q. 2020. QTL mapping of kernel traits and validation of a major QTL for kernel
length–width ratio using SNP and bulked segregant analysis in wheat. Scientific Reports, 10, 25.
Xu Y F, Li S S, Li L H, Ma F F, Fu X Y, Shi Z L, Xu H X,
Ma P T, An D G. 2017. QTL mapping for yield and photosynthetic related traits
under different water regimes in wheat. Molecular Breeding, 37,
34.
Yang Y, Amo A, Wei D, Chai Y, Zheng J, Qiao P, Cui C, Lu
S, Chen L, Hu Y G. 2021. Large-scale integration of meta-QTL and genome-wide
association study discovers the genomic regions and candidate genes for yield
and yield-related traits in bread wheat. Theoretical and Applied Genetics, 134, 3083–3109.
Yao F Q, Li X H, Wang H, Song Y N, Li Z Q, Li X G, Gao X
Q, Zhang X S, Bie X M. 2021. Down-expression of TaPIN1s increases the
tiller number and grain yield in wheat. BMC Plant Biology, 21, 443.
Zhang H, Chen J, Li R, Deng Z, Zhang K, Liu B, Tian J.
2016. Conditional QTL mapping of three yield components in common wheat (Triticum aestivum L.). The Crop Journal, 4, 220–228.
Zhang J, Dell B, Biddulph B, Drake-Brockman F, Walker E,
Khan N, Wong D, Hayden M, Appels R. 2013. Wild-type alleles of Rht-B1 and Rht-D1 as independent determinants of thousand-grain weight and
kernel number per spike in wheat. Molecular Breeding, 32,
771–783.
Zhang X, Wang J, Huang J, Lan H, Wang C, Yin C, Wu Y,
Tang H, Qian Q, Li J, Zhang H. 2012. Rare allele of OsPPKL1 associated
with grain length causes extra-large grain and a significant yield increase in
rice. Proceedings of the National Academy of Sciences of the United States of America, 109, 21534.
Zhang Y, Li D, Zhang D, Zhao X, Cao X, Dong L, Liu J,
Chen K, Zhang H, Gao C, Wang D. 2018. Analysis of the functions of TaGW2 homoeologs in wheat grain weight and protein content traits. The Plant Journal, 94, 857–866.
Zhou Y, Zhao X, Li Y, Xu J, Bi A, Kang L, Xu D, Chen H,
Wang Y, Wang Y G, Liu S, Jiao C, Lu H, Wang J, Yin C, Jiao Y, Lu F. 2020.
Triticum population sequencing provides insights into wheat adaptation. Nature Genetics, 52, 1412–1422.
Zhu J. 1995. Analysis of conditional genetic effects and
variance components in developmental genetics. Genetics, 141,
1633–1639.
|
