Please wait a minute...
Journal of Integrative Agriculture  2012, Vol. 12 Issue (12): 1933-1939    DOI: 10.1016/S1671-2927(00)8729
Crop Genetics · Breeding · Germplasm Resources Advanced Online Publication | Current Issue | Archive | Adv Search |
Genetic Analysis and Mapping of an Enclosed Panicle Mutant Locus esp1 in Rice (Oryza sativa L.)
 DUAN Yuan-lin, GUAN Hua-zhong, ZHUO Ming, CHEN Zhi-wei, LI Wen-tao, PAN Run-sen, MAO Da-mei, ZHOU Yuan-chang, WU Wei-ren
1.Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education/Fujian Agricultural and Forestry University,Fuzhou 350002, P.R.China
2.Fujian Provincial Key Laboratory of Marker-Assisted Breeding of Rice/Fujian Agriculture and Forestry University, Fuzhou 350002, P.R.China
Download:  PDF in ScienceDirect  
Export:  BibTeX | EndNote (RIS)      
摘要  A mutant was isolated from the M2 of 60Co-g ray mutagenized male-fertility restorer line Zao-R974 in rice. The mutant showed pleiotropic phenotypes including dwarfism, delayed heading time, short and partially enclosed panicles, short uppermost internode, decreased grain and secondary branch numbers per panicle, and partially degenerated spikelets. The mutant was named as esp1 (enclosed shorter panicle 1). Genetic analysis indicated that the mutant phenotype was controlled by a recessive locus. Spraying exogenous GA3 did not rescue the panicle enclosure. Using an F2 and a BC1 population of the cross between esp1 and a japonica cultivar Nipponbare, we mapped the ESP1 locus to a region of ~260 kb on chromosome 11. This result provides a basis for further map-based cloning of the ESP1 locus.

Abstract  A mutant was isolated from the M2 of 60Co-g ray mutagenized male-fertility restorer line Zao-R974 in rice. The mutant showed pleiotropic phenotypes including dwarfism, delayed heading time, short and partially enclosed panicles, short uppermost internode, decreased grain and secondary branch numbers per panicle, and partially degenerated spikelets. The mutant was named as esp1 (enclosed shorter panicle 1). Genetic analysis indicated that the mutant phenotype was controlled by a recessive locus. Spraying exogenous GA3 did not rescue the panicle enclosure. Using an F2 and a BC1 population of the cross between esp1 and a japonica cultivar Nipponbare, we mapped the ESP1 locus to a region of ~260 kb on chromosome 11. This result provides a basis for further map-based cloning of the ESP1 locus.
Keywords:  rice      panicle enclosure      esp1      genetic analysis      fine mapping  
Received: 24 March 2011   Accepted:
Fund: 

This work was supported by the National Transgenic Projects of China (2009ZX-08009-109B), the Natural Science Foundation of Fujian Province, China (2012J01091) and the New Century Excellent Talents in University of Fujian Province, China (KY0010057).

Corresponding Authors:  Correspondence WU Wei-ren, Tel: +86-591-83789176, E-mail: wuwr@fjau.edu.cn   
About author:  DUAN Yuan-lin, Tel: +86-591-83789338, E-mail: ylduan863@163.com

Cite this article: 

DUAN Yuan-lin, GUAN Hua-zhong, ZHUO Ming, CHEN Zhi-wei, LI Wen-tao, PAN Run-sen, MAO Da-mei, ZHOU Yuan-chang, WU Wei-ren. 2012. Genetic Analysis and Mapping of an Enclosed Panicle Mutant Locus esp1 in Rice (Oryza sativa L.). Journal of Integrative Agriculture, 12(12): 1933-1939.

[1]Duan Y L, Wu W R, Zhang D F, Liu H Q, Zhou Y C, Pan RS, Lin L H, Chen Z W, Guan H Z, Mao D M, et al. 2003.Genetic analysis and gene mapping of leafy head (lhd),a mutant blocking the differentiation of rachis brandiesin rice (Oryza sativa L.). Chinese Science Bulletin, 48,2201-2205.

[2]Guan H Z, Duan Y L, Liu H Q, Chen Z W, Zhuo M, ZhuangL J, Qi W M, Pan R S, Mao D M, Zhou Y C, et al. 2011.Genetic analysis and fine mapping of an enclosedpanicle mutant esp2 in rice (Oryza sativa L.). ChineseScience Bulletin, 56, 1476-1480.

[3]Goff S A, Ricke D, Lan T H, Presting G, Wang R L, Dunn M,Glazebrook J, Sessions A, Oeller P, Varma H, et al002E 2002.A draft sequence of the rice genome (Oryza sativa L.ssp. japonica). Science, 296, 92-100.

[4]Heu M H, Shretha G. 1986. Genetic analysis of sheathedpanicle in a Nepalese rice cultivar gamadi. In: RiceGenetics Symposium. IRRI, Manila, Philippines. pp. 317-322.

[5]Hidehiko S, Hikaru S, Yasuo N. 2003. Mutations in panicledevelopment affect culm elongation in rice. BreedingScience, 53, 109-117.

[6]Kinoshita T. 1990. Report of the committee on genesymbolization, nomenclature and linkage groups. RiceGenetics Newsletter, 7, 16-50.

[7]Lander E S, Green P, Abrahamson J, Barlow A, Daly M J,Linclon S E, Newburg L. 1987. MAPMAKER: Aninteractive computer package for constructing primarygenetic linkage maps of experimental and naturalpopulations. Genomics, 1, 174-181.

[8]Li A X, Li Z H, Ding K X, Yan G H. 1995. Measures forpreventing and controlling kernel smut in hybrid riceseed production. Jiangsu Agriculture Science, 4, 34-36. (in Chinese)

[9]Liu Z, Luo L J. 2006. Anatomical studies on the stem of riceof dwarf and sheathed panicle. Chinese AgricultureScience Bulletin, 22, 409-412.

[10](in Chinese)Lu Z M, Hong D L. 1999. Advances in hybrid rice seedproduction techniques. In: Amarjit S, Basra, eds.,Heterosis and Hybrid Seed Production in AgronomicCrops. Food Products Press-an Imprint of the HaworthPress, Incorporated, New York. pp. 65-79.

[11]Ma H L, Zhang S B, Ji L, Zhu H B, Yang S L, Fang X J, YangR C. 2006. Fine mapping and in silico isolation of theEUI1 gene controlling upper internode elongation inrice. Plant Molecular Biology, 60, 87-94.

[12]Maekawa M. 1986. Allelism test for the genes responsible forsheathed panicle. Rice Genetics Newsletter, 3, 62-63.

[13]Maekawa M, Inukai T. 1992. Genes linked with d-2 in rice.Japanese Journal of Breeding, 42, 212-213.

[14]Michelmore RW, Paran I, Kesseli R V. 1991. Identification ofmarkers linked to disease-resistance genes by bulkedsegregant analysis: a rapid method to detect markers inspecific genomic regions by using segregatingpopulations. Proceeding of the National Academy ofSciences of the United States of America, 88, 9828-9832.

[15]Shen Z T, Yang C D, He Z H. 1987. Studies on eliminatingpanicle enclosure in WAType MS line of rice (Oryzasativa subsp. indica). Journal of Chinese Rice Science,1, 95-99.

[16](in Chinese)Shrestha G L. 1984. Gene location for “Gamadiness” in rice(Oryza sativa L.). Korean Journal of Crop Science(Korea R.), 29, 128-135.

[17]Virmani S S, Dalmacio R D, Lopez M T. 1988. EUI gene forelongated uppermost internode transferred to indicarice. International Rice Research Newsletter, 13, 6-9.

[18]Wang W P, Zhu F Z, Tang L, Chen L Y, Wu X J. 2008.Discovery and preliminary analysis of a rice mutantwith fully sheathed panicle. Chinese AgriculturalScience Bulletin, 24, 212-216. (in Chinese)

[19]Wu K. 2009. Genetic analysis and mapping of a dwarf andsheathed panicle mutant dsp1 in rice (Oryza sativa L.),MSc thesis, Yangzhou University, Jiangsu. (in Chinese)Xiao H H, ZhongWH, LiangM Z, XuM L, Chen L B. 2005.Effect of temperature on the eui gene expression ofTGMS rice. Scientia Agricultura Sinica, 38, 222-227.(in Chinese)

[20]Yang R C, Zhang S B, Huang R H, Yang S R, Zhang Q Q.2002. Breeding technology of eui-hybrids of rice.Scientia Agricultura Sinica, 4, 359-363. (in Chinese)

[21]Zhu H B. 2003. Fine mapping and cloning of rice EUI2(t)gene controlling upper most internode elongation. Ph Dthesis, Fujian Agriculture and Forestry University,Fujian. (in Chinese)

[22]Zhu K M. 2006. Genetic analysis and mapping of SHP6gene in rice. MSc thesis, Yangzhou University, Jiangsu.(in Chinese)

[23]Zhu L, Hu J, Zhu K, Fang Y, Gao Z, He Y, Zhang G, Guo L,Zeng D, Dong G, et al. 2011. Identification andcharacterization of SHORTENED UPPERMOSTINTERNODE 1, a gene negatively regulating uppermostinternode elongation in rice. Plant Molecular Biology,77, 475-487.
[1] Yang Sun, Yu Liu, Li Zhou, Xinyan Liu, Kun Wang, Xing Chen, Chuanqing Zhang, Yu Chen. Activity of fungicide cyclobutrifluram against Fusarium fujikuroi and mechanism of the pathogen resistance associated with point mutations in FfSdhB, FfSdhC2 and FfSdhD[J]. >Journal of Integrative Agriculture, 2025, 24(9): 3511-3528.
[2] Yuxin He, Fei Deng, Chi Zhang, Qiuping Li, Xiaofan Huang, Chenyan He, Xiaofeng Ai, Yujie Yuan, Li Wang, Hong Cheng, Tao Wang, Youfeng Tao. Wei Zhou, Xiaolong Lei, Yong Chen, Wanjun Ren. Can a delayed sowing date improve the eating and cooking quality of mechanically transplanted rice in the Sichuan Basin, China?[J]. >Journal of Integrative Agriculture, 2025, 24(9): 3368-3383.
[3] Yunji Xu, Xuelian Weng, Shupeng Tang, Weiyang Zhang, Kuanyu Zhu, Guanglong Zhu, Hao Zhang, Zhiqin Wang, Jianchang Yang. Untargeted lipidomic analysis of milled rice under different alternate wetting and soil drying irrigation regimes[J]. >Journal of Integrative Agriculture, 2025, 24(9): 3351-3367.
[4] Yapeng Zhang, Wentao Cai, Qi Zhang, Qian Li, Yahui Wang, Ruiqi Peng, Haiqi Yin, Xin Hu, Zezhao Wang, Bo Zhu, Xue Gao, Yan Chen, Huijiang Gao, Lingyang Xu, Junya Li, Lupei Zha. Integrated analyses of genomic and transcriptomic data reveal candidate variants associated with carcass traits in Huaxi cattle[J]. >Journal of Integrative Agriculture, 2025, 24(8): 3169-3184.
[5] Siriyaporn Chanapanchai, Wahdan Fitriya, Ida Bagus Made Artadana, Kanyaratt Supaibulwatana. Important role and benefits of Azolla plants in the management of agroecosystem services, biodiversity, and sustainable rice production in Southeast Asia[J]. >Journal of Integrative Agriculture, 2025, 24(8): 3004-3023.
[6] Weiguang Yang, Bin Zhang, Weicheng Xu, Shiyuan Liu, Yubin Lan, Lei Zhang. Impact of hyperspectral reconstruction techniques on the quantitative inversion of rice physiological parameters: A case study using the MST++ model[J]. >Journal of Integrative Agriculture, 2025, 24(7): 2540-2557.
[7] Zhongwei Tian, Yanyu Yin, Bowen Li, Kaitai Zhong, Xiaoxue Liu, Dong Jiang, Weixing Cao, Tingbo Dai. Optimizing planting density and nitrogen application to mitigate yield loss and improve grain quality of late-sown wheat under rice–wheat rotation[J]. >Journal of Integrative Agriculture, 2025, 24(7): 2558-2574.
[8] Jianqi Zeng, Dehui Zhao, Li Yang, Yufeng Yang, Dan Liu, Yubing Tian, Fengju Wang, Shuanghe Cao, Xianchun Xia, Zhonghu He, Yong Zhang. Fine mapping and candidate gene analysis of a major QTL for grain length on chromosome 5BS in bread wheat[J]. >Journal of Integrative Agriculture, 2025, 24(7): 2465-2474.
[9] Jianan Li, Weidong Li, Wenjie Ou, Waqas Ahmed, Mohsin Mahmood, Ahmed S. M. Elnahal, Haider Sultan, Zhan Xin, Sajid Mehmood. Alleviating vanadium-induced stress on rice growth using phosphorus-loaded biochar[J]. >Journal of Integrative Agriculture, 2025, 24(7): 2525-2539.
[10] Shulin Zhang, Yu Wang, Jinmei Hu, Xinyue Cui, Xiaoru Kang, Wei Zhao, Yuemin Pan. The N-mannosyltransferase MoAlg9 plays important roles in the development and pathogenicity of Magnaporthe oryzae[J]. >Journal of Integrative Agriculture, 2025, 24(6): 2266-2284.
[11] Tongming Wang, Kai Zhou, Bingxian Yang, Benoit Lefebvre, Guanghua He. OsEXO70L2 is required for large lateral root formation and arbuscular mycorrhiza establishment in rice[J]. >Journal of Integrative Agriculture, 2025, 24(6): 2035-2045.
[12] Kuanyu Zhu, Yuemei Xu, Zhiwei Sun, Yajun Zhang, Weiyang Zhang, Yunji Xu, Junfei Gu, Hao Zhang, Zhiqin Wang, Lijun Liu, Jianhua Zhang, Jianchang Yang. Post-anthesis dry matter production and leaf nitrogen distribution are associated with root-derived cytokinins gradient in rice[J]. >Journal of Integrative Agriculture, 2025, 24(6): 2106-2122.
[13] Zhaowen Mo, Siren Cheng, Yong Ren, Longxin He, Shenggang Pan, Haidong Liu, Hua Tian, Umair Ashraf, Meiyang Duan, Xiangru Tang. Reduced tillage coupled with straw return improves the grain yield and 2-acetyl-1-pyrroline content in fragrant rice[J]. >Journal of Integrative Agriculture, 2025, 24(5): 1718-1737.
[14] Yuanhao Liu, Ting Sun, Yuyong Li, Jianqiang Huang, Xianjun Wang, Huimin Bai, Jiayi Hu, Zifan Zhang, Shuai Wang, Dongmei Zhang, Xiuxiu Li, Zonghua Wang, Huakun Zheng, Guifang Lin. Proteomic analysis revealed the function of PoElp3 in development, pathogenicity, and autophagy through the tRNA-mediated translation efficiency in the rice blast fungus[J]. >Journal of Integrative Agriculture, 2025, 24(4): 1515-1528.
[15] Mengyan Cao, Shaoping Ye, Cheng Jin, Junkang Cheng, Yao Xiang, Yu Song, Guorong Xin, Chuntao He. The communities of arbuscular mycorrhizal fungi established by different winter green manures in paddy fields promote post-cropping rice production[J]. >Journal of Integrative Agriculture, 2025, 24(4): 1588-1605.
No Suggested Reading articles found!