Scientia Agricultura Sinica ›› 2025, Vol. 58 ›› Issue (12): 2358-2370.doi: 10.3864/j.issn.0578-1752.2025.12.007

• PLANT PROTECTION • Previous Articles     Next Articles

Isolation and Identification of Pathogen of Plum Bacterial Shot Hole and Laboratory Test of Bactericide Toxicity

ZHAO YuMeng(), LI GuangXu, DAI QiDong, LIU JiaCheng, ZHAO HaiJuan, ZHANG YuJun, YANG Hua(), LIU Shuo()   

  1. Liaoning Institute of Pomology, Yingkou 115009, Liaoning
  • Received:2025-03-10 Accepted:2025-04-25 Online:2025-06-19 Published:2025-06-19
  • Contact: YANG Hua, LIU Shuo

Abstract:

【Objective】Plum cultivation is an important industry in Liaoning region, while the large-scale epidemic of bacterial shot hole has seriously affected the sustainable development of plum cultivation. The purpose of this paper is to clarify the pathogenic bacteria species of plum bacterial shot hole in Liaoning, and to explore the toxicity of different agents against the pathogenic bacteria, so as to provide a theoretical basis for the prevention and control of the disease.【Method】From 2023 to 2024, the occurrence of plum bacterial shot hole was investigated in 10 plum production areas of Liaoning Province. By collecting 20 disease samples of leaves, fruits, and twigs with typical symptoms, a total of 30 pathogenic bacteria were isolated, purified and preserved. The characteristics of these colonies including morphology, color, size and edge morphology were observed and recorded. Transmission electron microscopy was employed to further observe their morphology and the Gram staining was performed. The bacterial 16S rDNA universal primer 27F/1492R and multiple gene loci were used for amplification. The sequencing result was compared by BLASTn analysis in the NCBI database and the reference sequences of the corresponding genera were downloaded. Then, a multi-gene joint phylogenetic tree was constructed using the maximum likelihood method on the website of GIPRES Science Gateway. Subsequently, the leaves of ‘Qiu Ji’ plum were inoculated with pathogenic bacteria by the stab inoculation of bacterial suspension, and then cultivated at 28 ℃ under high humidity. The disease occurrence of the leaves was regularly observed and recorded. Furthermore, the pathogenic bacteria were re-isolated from the disease-health junction of the leaves to complete the verification of the whole Koch’s postulates. The sensitivities of pathogenic bacteria to 0.15% tetramycin, 80% ethylicin, 3% benziothiazolinone, 1.8% octylamine, 3% zhongshengmycin and 6% kasugamycin were determined by the inhibition zone method, respectively.【Result】Based on morphological observation and molecular biology identification, the pathogenic bacteria were identified as Xanthomonas arboricola pv. pruni (Xap) (36.67%, 11 strains) and Pantoea vagans (63.33%, 19 strains). The sensitivity results demonstrated that the best inhibitory activities were achieved by 0.15% tetramycin and 80% ethylicin, with the EC50 of 0.15% tetramycin being 0.026 and 0.502 μg·mL-1 for Xap and P. vagans, respectively, and that of 80% ethylicin being 1.162 and 25.643 μg·mL-1, respectively. The second was 3% benziothiazolinone, and its EC50 values against Xap and P. vagans were correspondingly 5.200 and 96.075 μg·mL-1, followed by EC50 of 1.8% octylamine against Xap and P. vagans of 176.008, 273.072 μg·mL-1, and 3% zhongshengmycin against Xap and P. vagans of 621.697 and 72.270 μg·mL-1. As for 6% kasugamycin, it had an EC50 of 886.467 μg·mL-1 for P. vagans and was less effective in inhibiting Xap.【Conclusion】The pathogens causing plum bacterial shot hole in Liaoning were identified as Xap and P. vagans. Moreover, the 0.15% tetramycin and 80% ethylicin were screened and selected as exerting better inhibitory effects on these two pathogens. The results of the study will provide a theoretical basis for the precise prevention and control of plum bacterial shot hole in the field.

Key words: plum, bacterial shot hole, pathogen identification, toxicity, Xanthomonas arboricola pv. pruni (Xap), Pantoea vagans

Table 1

Primers used for molecular identification"

基因Gene 引物序列Primer sequence (5′-3′) 片段长度Fragment length (bp) 退火温度Tm (℃)
gyrB GCGTAAGCGCCCGGGTATGTA
CCGTCGACGTCCGCATCGGTCAT
722 52
dnaK TGGGCAAGATCATTGGTATT
ACCTTCGGCATACGGGTCTG
759 67
efp GTCAAGAACGGCATGAAGA
TCGTCCTGGTTGACGAAC
339 65
atpD GGGCAAGATCGTTCAGAT
GCTCTTGGTCGAGGTGAT
750 64
fusA CATCGGTATCAGTGCKCACATCGA
CAGCATCGCCTGAACRCCTTTGTT
588 55
leuS CAGACCGTGCTGGCCAACGARCARGT
CGGCGCGCCCCARTARCGCT
642 56
rpoB GGCGAAATGGCWGAGAACCA
GAGTCTTCGAAGTTGTAACC
501 50

Table 2

Standard sequences required for constructing a Xanthomonas spp. phylogenetic tree"


Species
菌株
Strain
GenBank登录号GenBank accession number
16S rDNA dnaK efp atpD
树生黄单胞菌李致病变种XapT CFBP 6653 KP669336 KP669433 KP669239
树生黄单胞菌李致病变种Xap CQLG2-1 MW504109 MW504130 MW504151
树生黄单胞菌李致病变种Xap ZY2-2-2a MW504106 MW504127 MW504148
树生黄单胞菌核桃致病变种
X. arboricola pv. juglandisT
CFBP 2528 KF904465 KF904566 KF904364
树生黄单胞菌核桃致病变种
X. arboricola pv. juglandisT
LMG 747 NR_125714 HM568978 HM569062 HM568894
白条黄单胞菌X. albilineansT LMG 494 NR_026316 KF306117 KF306131 KF306103
X. hyacinthiT LMG 739 NR_029331 KF306121 KF306135 KF306107
X. sacchariT LMG 471 NR_026392 KF306116 KF306130 KF306102
X. pisiT LMG 847 NR_026385 HM569030 HM569113 HM568946
X. vasicolaT LMG 736 NR_026383 HM569039 HM569122 HM569039
野油菜黄单胞菌X. campestrisT LMG 568 NR_119219 HM568987 HM569070 HM568903
水稻黄单胞菌X. oryzaeT LMG 5047 NR_026319 HM569028 HM569111 HM568944
X. populiT LMG 5743 NR_026320 HM569031 HM569114 HM568947
丁香假单胞菌丁香致病变种
P. syringae pv. syringaeT
ICMP 3023 NR_117820 KU161383

Table 3

Standard sequences required for constructing a Pantoea spp. phylogenetic tree"


Species
菌株
Strain
GenBank登录号GenBank accession number
16S rDNA gyrB fusA leuS rpoB
成团泛菌P. agglomeransT LMG 1286 NR_116751 KF482599 KF482545 KF482638 KF482728
成团泛菌P. agglomerans RSG17 MK125303 MK125191 MK125229 MK125248
成团泛菌P. agglomerans QYZ1 MK348973 MK348963 MK348967 MK348969
菠萝泛菌P. ananatisT LMG 2665 NR_119362 KF482590 KF482549 KF482626 KF482748
分散泛菌P. dispersaT LMG 2603 NR_116755 KF482604 KF482536 KF482630 KF482749
斯氏泛菌P. stewartiiT LMG 2632 NR_119256 KF482583 KF482567 KF482622 KF482743
P. cypripedil T LMG 2657 NR_119369 KF482603 KF482554 KF482629 KF482720
P. septicaT LMG 5345 NR_116752 KF482593 KF482555 KF482639 KF482750
瓦氏泛菌P. vagansT LMG 24199 NR_116115 KF482600 KF482541 KF482636 KF482722
瓦氏泛菌P. vagans Y12-2 OL413426 OP272647 OP272642 OL441801 OP272662
瓦氏泛菌P. vagans Y2-1 OL413423 OP272644 OP272639 OL441798 OP272659
瓦氏泛菌P. vagans Y10-1 OL413425 OP272646 OP272641 OL441800 OP272661
瓦氏泛菌P. vagans Y5-1 OL413424 OP272645 OP272640 OL441799 OP272660
P. anthophilaT LMG 2558 NR_116113 KF482594 KF482550 KF482632 KF482723
P. deleyiT LMG 24200 NR_116114 KF482601 KF482540 KF482631 KF482721
P. eucalyptiT LMG 24197 NR_116112 KF482597 KF482543 KF482635 KF482726
P. alliiT LMG 24248 KF482586 KF482546 KF482623 KF482744
土壤塔特姆菌T. terreaT CIP 105600 KF482605 KF482534 KF482642 KF482753

Table 4

Information of the tested bactericides"

药剂
Bactericide
剂型
Dosage form
生产供应商
Manufacturer
浓度
Concentration (mg·mL-1)
80%乙蒜素Ethylicin 乳油EC 南阳新卧龙生物化工有限公司
Nanyang Xin Wolong Bio-Chemical Co., Ltd.
16.000/8.000/1.600/0.5333/0.2667
0.15%梧宁霉素Tetramycin 水剂AS 辽宁微科生物工程有限公司
Liaoning Weike Biotechnology Co., Ltd.
0.150/0.015/0.003/0.0015/0.0006
3%噻霉酮Benziothiazolinone 悬浮剂SC 安道麦辉丰(江苏)有限公司
ADAMA Huifeng (Jiangsu) Co., Ltd.
6.000/0.600/0.300/0.150/0.060
1.8%辛菌胺醋酸盐Octylamine 水剂AS 西安近代科技实业有限公司
Xi’an Jindai Technology Industrial Co., Ltd.
3.600/0.360/0.180/0.090/0.036
3%中生菌素Zhongshengmycin 可湿性粉剂WP 河北中保绿农作物科技有限公司
Hebei Zhongbao Green Crops Science & Technology Co., Ltd.
6.000/0.600/0.300/0.150/0.060
6%春雷霉素Kasugamycin 水剂AS 山东鲁抗生物农药有限责任公司
Shandong Lukang Biological Pesticide Co., Ltd.
12.000/1.200/0.600/0.300/0.120

Fig. 1

Symptoms of bacterial shot hole on leaves, fruits, and twigs of plum"

Table 5

Information of bacterial strains isolated from disease samples of plum bacterial shot hole"

采集地点Collection location 品种Variety 来源Source 病原菌种类Pathogen species
营口市鲅鱼圈区熊岳镇
Xiongyue Town, Bayuquan District, Yingkou City
国峰17号李
Guofeng No. 17 plum
叶片、果实
Leaf, fruit
树生黄单胞菌李致病变种、瓦氏泛菌Xap, P. vagans
营口市盖州市杨运镇
Yangyun Town, Gaizhou City, Yingkou City
大红袍李
Dahongpao plum
叶片
Leaf
瓦氏泛菌
P. vagans
营口市盖州市小石棚乡
Xiaoshipeng Township, Gaizhou City, Yingkou City
国馨李、国色天香李Guoxin plum, Guosetianxiang plum 叶片、果实、枝干Leaf, fruit and twig 树生黄单胞菌李致病变种、瓦氏泛菌Xap, P. vagans
营口市盖州市万福镇
Wanfu Town, Gaizhou City, Yingkou City
大红袍李
Dahongpao plum
叶片、果实
Leaf, fruit
瓦氏泛菌
P. vagans
营口市盖州市陈屯镇
Chentun Town, Gaizhou City, Yingkou City
大红袍李
Dahongpao plum
叶片
Leaf
瓦氏泛菌
P. vagans
营口市大石桥市周家镇
Zhoujia Town, Dashiqiao City, Yingkou City
盖县大李子
Gaixian plum
叶片
Leaf
树生黄单胞菌李致病变种、瓦氏泛菌Xap, P. vagans
大连市瓦房店市万家岭镇
Wanjialing Town, Wafangdian City, Dalian City
大红袍李
Dahongpao plum
叶片、果实
Leaf, fruit
瓦氏泛菌
P. vagans
大连市庄河市长岭镇
Changling Town, Zhuanghe City, Dalian City
蜂糖李、国馨李
Fengtang plum, Guoxin plum
叶片、果实
Leaf, fruit
树生黄单胞菌李致病变种、瓦氏泛菌Xap, P. vagans
葫芦岛市兴城市
Xingcheng City, Huludao City
秋李
Qiu plum
叶片、果实
Leaf, fruit
瓦氏泛菌
P. vagans
鞍山市岫岩满族自治县
Xiuyan Manchu Autonomous County, Anshan City
大红袍李
Dahongpao plum
叶片
Leaf
瓦氏泛菌
P. vagans

Fig. 2

Colonial morphology on NA medium and microscopic observation"

Table 6

Physiological and biochemical characteristics of representative strains"

特性 Characteristic ZH-FTL-2 ZJ-GX-8 XSP-2-4 XSP-45-9
革兰氏染色Gram stain - - - -
氧化酶Oxidase - - - -
过氧化氢酶Catalase + + + +
硝酸盐还原Nitrate reduction - - - -
明胶液化Gelatin liquefaction + + - -
硫化氢产生H2S production + + + +
七叶苷水解Aescinate hydrolysis + + + +
丙二酸Malonate + + + +
蔗糖Sucrose + + + +
葡萄糖Glucose + + + +
α-半乳糖α-galactose + + + +
D-果糖D-fructose + + + +
甘露醇Mannitol + + + +

Fig. 3

Phylogenetic tree constructed based on 16S rDNA, dnaK, efp and atpD sequences"

Fig. 4

Phylogenetic tree constructed based on 16S rDNA, fusA, gyrB, leuS and rpoB sequences"

Fig. 5

Disease symptoms on plum leaves 48 hours after inoculation"

Table 7

Laboratory determination of the toxicity of six bactericides on Xap and P. vagans"

病原菌
Pathogen
药剂
Bactericide
毒力回归方程
Toxicity regressive equation (y=)
相关性系数
Correlation coefficient (r)
EC50
(μg·mL-1
树生黄单胞菌李致病变种
Xap
80%乙蒜素Ethylicin 0.3302x+5.9691 0.9843 1.162
0.15%梧宁霉素Tetramycin 0.3646x+5.5773 0.9073 0.026
3%噻霉酮Benziothiazolinone 0.3846x+5.8784 0.9326 5.200
1.8%辛菌胺醋酸盐Octylamine 0.6769x+5.5107 0.9727 176.008
3%中生菌素Zhongshengmycin 1.0963x+5.2263 0.9046 621.697
6%春雷霉素Kasugamycin
瓦氏泛菌
P. vagans
80%乙蒜素Ethylicin 0.3878x+5.6170 0.9913 25.643
0.15%梧宁霉素Tetramycin 0.4184x+6.3805 0.9525 0.502
3%噻霉酮Benziothiazolinone 0.4715x+5.4797 0.9097 96.075
1.8%辛菌胺醋酸盐Octylamine 0.6544x+5.3689 0.9123 273.072
3%中生菌素Zhongshengmycin 0.4013x+5.4579 0.9009 72.270
6%春雷霉素Kasugamycin 0.8235x+5.0431 0.9027 886.467
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