Scientia Agricultura Sinica ›› 2023, Vol. 56 ›› Issue (24): 4956-4966.doi: 10.3864/j.issn.0578-1752.2023.24.013

• ANIMAL SCIENCE・VETERINARY SCIENCE • Previous Articles    

Screening and Identification of Nanobodies Against Novel Goose Astrovirus ORF2 Protein

WANG Dan(), JI YanHong, LIANG ShiRui, YANG Jie, ZHU QiYun()   

  1. State Key Laboratory for Animal Disease Control and Prevention/Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou 730046
  • Received:2023-04-07 Accepted:2023-09-20 Online:2023-12-16 Published:2023-12-21
  • Contact: ZHU QiYun

Abstract:

【Objective】 The gosling gout disease caused by the novel goose astrovirus (nGAstV) has brought significant economic losses to the goose industry. In this study, a nanobody phage display library for nGAstV was constructed to obtain the specific nanobodies (Nbs) that recognize the ORF2 protein of nGAstV, which could pave a way for the establishment of antibody-based detection methods and the study on the structure and function of nGAstV ORF2 protein. 【Method】 The proliferated nGAstV in LMH cells was purified by sucrose gradient centrifugation. nGAstV was identified by RT-PCR and the virus titer was determined by cytopathic effect. The two-year-old alpacas were immunized with purified nGAstV inactivated by 0.6% formaldehyde solution. For the first immunization, inactivated nGAstV was emulsified with an equal volume of Freund's complete adjuvant. For the second to fifth immunization, inactivated nGAstV was emulsified with an equal volume of Freund's incomplete adjuvant. The immunization was performed every two weeks with a dose of 50 μg. And the titer of IgG against nGAstV in alpaca serum collected at 14 days post the fifth immunization was determined by indirect ELISA. When the IgG titer reached the standard for constructing a library, the alpaca peripheral blood lymphocytes (PBL) were isolated. The total RNA of PBL was extracted and reverse-transcribed into cDNA. The variable region gene of the heavy chain was amplified by nested PCR. It was constructed into pComb phage vector and combined with phage display technology to construct nGAstV Nb phage display library. The capacity of the library was calculated and its diversity was analyzed. nGAstV was used as a target antigen for three rounds of enrichment and panning to obtain recombinant phage Nb positive clones. The positive clones were then cloned into pcDNA3.1-Fc eukaryotic expression vectors followed by sequencing analysis. The plasmids with different sequences were transfected into HEK-293F cells, and the expression level was identified by SDS-PAGE. The nGAstV was used as a target antigen to test the specificity and binding activity of the expressed Nb by ELISA and Western blot. The affinity of Nb was verified using indirect ELISA using nGAstV ORF2 protein as the target antigen and to screen Nbs with better biological activity. 【Result】 The results of RT-PCR showed that nGAstV was ready to be proliferated in LMH cells. The titer of nGAstV virus was 4.38 Log10 TCID50/mL by calculated by the Reed-Muench method. The titer of nGAstV antibodies in alpaca serum reached over 1:64 000 after five immunizations. The VHH gene was amplified by nested PCR and a phage display library of nGAstV Nb with a library capacity of 3.8×108 CFU/mL was successfully constructed. Phylogenetic tree analysis showed that the phage Nb library had an excellent diversity. 39 phage positive clones were acquired, which reacted with nGAstV post three rounds of enrichment and panning, including 25 Nbs with different sequences. The results of SDS-PAGE identification showed that a total of 10 Nbs were successfully expressed. Among them, 8 Nbs that reacted explicitly with nGAstV ORF2 protein were further confirmed by ELISA and western blot, among which one Nb showed the best biological activity. 【Conclusion】 In this study, Nbs that reacted specifically with nGAstV ORF2 protein were screened for the first time, which provided materials for basic research and developing nGAstV detection methods.

Key words: novel Goose Astrovirus, ORF2 Protein, nanobody, phage display

Table 1

Primers used for identification of nGAstV"

引物
Primer
引物序列
Primer sequence (5′→3′)
nGAstV-F AAGAATGTYGATAGTACCCCT
nGAstV-R TACCCCAGAGTGATTCTAAGTTGG

Table 2

Primers used for nested PCR"

引物Primer 引物序列 Primer sequence (5′→3′)
IgG-F GTCCTGGCTGCTCTTCT
IgG-R GGTACGTGCTGTTGA
VHH-F CTACAAATGCCTATGCATCCCAGGTGCAGCTC
GTGGAGTC
VHH-R AAACAACTTTCAACAGTGGAGGGGTCTTCGCT
GTGGTGCG

Table 3

Primers used for identification of Nb"

引物Primer 引物序列 Primer sequence (5′→3′)
pComb-F AAAGAATATCGCATTTCTTCTTGCATCT
pComb-R AGGAGACGGTGACCTGGGTCCCCTG

Table 4

Primers used for amplification of Nb"

引物Primer 引物序列 Primer sequence (5′→3′)
Nb-F TCCAGTGTGGTGGAATTCGCCACCAAAAAGAATATCGCATTTCTTCTTGCATCT
Nb-R TCTAGACTCGAGTCAGTGATGGTGGTGGTGGTGGTGGTGGTGTGAGGAGACGGTGACCTGGG

Fig. 1

The results of nGAstV proliferation A: nGAstV PCR identification (M: DL2000 DNA Marker; 1: nGAstV); B: Cytopathic effect of LMH infected by the nGAstV"

Fig. 2

Determination of antibody titer in alpaca serum by ELISA"

Fig. 3

Construction and identification of M13 phage antibody library A: The first round of PCR (M: DL2000 DNA Marker; 1: IgG); B: The second round of PCR (M: DL2000 DNA Marker; 1: VHH); C: The library ligation efficiency was identified by PCR (M: DL2000 DNA Marker; 1-12: The original library plasmid); D: Phylogenetic tree analysis"

Fig. 4

Panning and enrichment of nGAstV specific phage A: Panning of nGAstV specific phage; B: Enrichment of nGAstV specific phage"

Fig. 5

Sequence analysis and expression of Nbs A: Amino acid sequence analysis of Nb; B: Expression results of Nb (M: Protein Marker; lanes 2-11: 10 screened Nbs)"

Fig. 6

The activity of recombinant nanobodies identified by ELISA"

Fig. 7

Specificity detection of recombinant nanobodies A: Western blot analysis (1: NDV; 2: H9N2 AIV; 3: nGAstV); B: Western blot analysis (1: NDV F protein; 2: nGAstV ORF2 protein)"

Table 5

Identification results of recombinant Nb affinity"

纳米抗体编号
Nanobody (Nb) number
Nb1 Nb8 Nb12 Nb30 Nb31 Nb33 Nb36 Nb38
EC50 (ng·μL-1) 12.93 74.24 5.52 2.78 12.92 94.55 14.20 20.77
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