Scientia Agricultura Sinica ›› 2018, Vol. 51 ›› Issue (19): 3683-3693.doi: 10.3864/j.issn.0578-1752.2018.19.006

• PLANT PROTECTION • Previous Articles     Next Articles

Composition and quantitative analysis of Fusarium species in maize rhizosphere soil

GE Bo1,2, WANG BaoBao1, GUO Cheng3, SUN SuLi1, CHEN GuoKang2, WANG XiaoMing1, ZHU ZhenDong1, DUAN CanXing1   

  1. 1Institute of Crop Sciences/National Key Facility of Crop Gene Resources and Genetic Improvement, Chinese Academy of Agricultural Sciences, Beijing 100081; 2College of Plant Protection, Southwest University, Chongqing 4007153Institute of Plant Protection, Gansu Academy of Agricultural Sciences, Lanzhou 730070
  • Received:2018-04-11 Online:2018-10-01 Published:2018-10-01

Abstract: 【Objective】The objective of this study is to understand the population structure and relative content of Fusarium spp. in maize rhizosphere soil in China, and to provide an early warning of the occurrence of soil-borne maize diseases.【Method】Using dilution plate method, a total of 58 Fusarium isolates were obtained from 47 maize soil samples of 17 provinces (autonomous region, municipality). Based on morphological characteristic, specific PCR amplification, and ITS and TEF-1α gene sequences analysis, these Fusarium spp. were further determined. The reference strain sequences were downloaded from GenBank and Fusarium MLST. Multi-gene loci phylogenetic tree was constructed by neighbor-joining method (NJ) using MEGA 6.0 software. Some representative strains were selected for pathogenicity test by maize seedlings, seeds and in vitro leaves infection. The content of Fusarium spp. and some species in maize rhizosphere soil samples was detected using RT-qPCR determination system. Statistical analysis was carried out for different maize producing areas.【Result】 A total of 9 Fusarium species were identified. Among them, F. verticillioides (22.41%), F. quisete (20.69%) and F. graminearum species complex (18.97%) were isolated more frequently. The rest of 6 species were F. oxysporum species complex, F. proliferatum, F. dimerum, F. acuminarum, F. solani and F. commune, with the isolation frequency of 12.07%, 8.62%, 5.17%, 5.17%, 3.40%, and 3.40%, respectively. The results showed that the same Fusarium spp. and the reference strain were in the same branch, and the diversity of Fusarium spp. existed in different regions. All Fusarium species were pathogenic except F. dimerum. F. commune was isolated from maize rhizosphere soil and confirmed to be pathogenic to maize seed, seedling, and detached leaf for the first time. The pathogenicity of different strains of the same Fusarium species was not the same. Using RT-qPCR detection system, the total of Fusarium, F. verticillioides and F. graminearum species complex in maize soil samples were quantitatively assayed, with the content range of 2.91-169.90, 0.08-5.34 and 0.76-78.37 pg·g-1, respectively. The content of Fusarium species in different maize producing areas was different, and the content of F. graminearum was higher than that of F. verticillioides. 【Conclusion】There are multiple species of Fusarium in maize rhizosphere soil and F. verticillioides, F. equiseti, and F. graminearum species complex are dominant species. The content of Fusarium spp. differs in different areas. Among them, the content of Fusarium spp. is the highest in Southwest mountainous area of maize, and the F. graminearum content in the Huang-huai-hai summer sowing maize area is higher than that in other regions.

Key words: maize;rhizosphere soil, Fusarium spp., RT-qPCR

[1]    纪莉景, 栗秋生, 王连生, 李聪聪, 孔令晓. 河北省夏玉米苗期根病发生现状及病原初探. 玉米科学, 2014, 22(6): 138-141.
JI L J, LI Q S, WANG L S, LI C C, KONG L X. Occurrence and identification of maize root rot diseases and the pathogens in Hebei Province. Journal of Maize Sciences, 2014, 22(6): 138-141. (in Chinese)
[2]    Duan C X, Qin Z H, Yang Z H, Li W X, Sun S L, Zhu Z D, Wang X M. Identification of pathogenic Fusarium spp. causing maize ear rot and potential mycotoxin production in China. Toxins, 2016, 8(6): 186.
[3]    Lal S, Singh I S. Breeding for resistance to downy mildews and stalk rots in maize. Theoretical and Applied Genetics, 1984, 69(2): 111-119.
[4]    秦子惠, 任旭, 江凯, 武小菲, 杨知还, 王晓鸣. 我国玉米穗腐病致病镰孢种群及禾谷镰孢复合种的鉴定. 植物保护学报, 2014, 41(5): 589-596.
QIN Z H, REN X, JIANG K, WU X F, YANG Z H, WANG X M. Identification of Fusarium species and F. graminearum species complex causing maize ear rot in China. Journal of Plant Protection, 2014, 41(5): 589-596. (in Chinese)
[5]    郭成, 魏宏玉, 郭满库, 何苏琴, 金社林, 陈红梅, 王晓鸣, 郭建国. 甘肃玉米穗腐病样品中轮枝镰孢菌的分离鉴定及生物学特性. 植物病理学报, 2014, 44(1): 17-25.
GUO C, WEI H Y, GUO M K, HE S Q, JIN S L, CHEN H M, WANG X M, GUO J G. Isolation, identification and biological characteristics of Fusarium verticillioides from maize ear rot samples in Gansu Province.Acta Phytopathologica Sinica, 2014, 44(1): 17-25. (in Chinese)
[6]    唐琳, 赵辉. 豫西地区茄科作物土壤镰孢菌的种群多样性分析. 中国蔬菜, 2013(24): 65-69.
TANG L, ZHAO H. Species diversity analysis on Fusarium of Solanaceae crops soil in western Henan Province. China Vegetables, 2013(24): 65-69. (in Chinese)
[7]    黎永坚, 陈远凤, 喻国辉, 陈燕红, 戴宇光. 粉蕉种植土镰刀菌分离与鉴定. 广东农业科学, 2014(16): 74-80.
LI Y J, CHEN Y F, YU G H, CHEN Y H, DAI Y G. Separation and identification of Fusarium in banana planted soil. Guangdong Agricultural Sciences, 2014(16): 74-80. (in Chinese)
[8]    刘金波, 许艳丽, 魏巍. 大豆根际土壤镰孢菌不同分离方法比较. 大豆科学, 2008, 27(1): 106-112.
LIU J B, XU Y L, WEI W. Comparing different methods for isolating Fusarium from soybean rhizosphere soil. Soybean Science, 2008, 27(1): 106-112. (in Chinese)
[9]    孙广林, 夏永胜, 张中原. 关于大豆配方施肥的研究与应用. 土壤通报, 2007, 38(3): 527-530.
SUN G L, XIA Y S, ZHANG Z Y. Recommended fertilization for soybean and its application. Chinese Journal of Soil Science, 2007, 38(3): 527-530. (in Chinese)
[10]   魏巍, 许艳丽, 刘金波, 李春杰, 韩晓增, 李文滨, 李淑娴. 土壤镰孢菌real-time qPCR定量方法的建立及应用. 大豆科学, 2010, 29(4): 655-658, 662.
Wei W, Xu Y L, Liu J B, Li C J, Han X Z, Li W B, Li S X. Development and application of a real-time quantitative PCR assay for detection of Fusarium spp. in soil. Soybean Science, 2010, 29(4): 655-658, 662. (in Chinese)
[11]   SCHENA L, NIGRO F, IPPOLITO A. Real-time PCR detection and quantification of soilborne fungal pathogens: the case of Rosellinia necatrix, Phytophthora nicotianae, P. citrophthora, and Verticillium dahliae. Phytopathologia Mediterranea2004, 43: 273-280.,
[12]   王宏乐. 荧光定量PCR监测黄瓜根分泌物对土壤中枯萎病菌生物量的影响. 上海交通大学学报 (农业科学版), 2010, 28(1): 41-45.
WANG H L. Effects of root exudates of cucumber on population of Fusarium oxysporum f. sp. cucumerinum in soil as detected by real-time PCR. Journal of Shanghai Jiaotong University (Agricultural Science), 2010, 28(1): 41-45. (in Chinese)
[13]   Nam H M, Srinivasan V, Gillespie B E, Murinda S E, Oliver S P. Application of SYBR green real-time PCR assay for specific detection of Salmonella spp. in dairy farm environmental samples. International Journal of Food Microbiology, 2005, 102(2): 161-171.
[14]   鲁如坤. 土壤农业化学分析方法. 北京: 中国农业科学技术出版社, 1999.
Lu C K. Methods for analysis of soil agrochemistry. Beijing: China Agricultural Science and Technology Press, 1999. (in Chinese)
[15]   Leslie J F, Summerell B A. The Fusarium laboratory manual, 2006.. Blackwell Pub Professional
[16]   王拱辰. 常见镰刀菌鉴定指南. 北京: 中国农业科学技术出版社, 1996.
Wang G C. Common guidebook for identification of Fusarium. Beijing: China Agricultural Science and Technology Press, 1996. (in Chinese)
[17]   Bluhm B H, Flaherty J E, Cousin M A, Woloshuk C P. Multiplex polymerase chain reaction assay for the differential detection of trichothecene- and fumonisin-producing species of Fusarium in cornmeal. Journal of Food Protection, 2002, 65(12): 1955-1961.
[18]   Nicholson P, Simpson D R, Weston G, Rezanoor H N, Lees A K, PARRY D W, JOYCE D. Detection and quantification of Fusarium culmorum and Fusarium graminearum in cereals using PCR assays. Physiological and Molecular Plant Pathology, 1998, 53(1): 17-37.
[19]   Mishra P K, Fox R T, Culham A. Development of a PCR-based assay for rapid and reliable identification of pathogenic Fusaria. FEMS Microbiology Letters, 2003, 218(2): 329-332.
[20]   Mule G, Susca A, Stea G, Moretti A. A species-specific PCR assay based on the calmodulin partial gene for identification of Fusarium verticillioides, F. proliferatum and F. subglutinans. European Journal of Plant Pathology, 2004, 110(5/6): 495-502.
[21]   葛波. 土壤镰孢菌检测技术的建立及其应用[D]. 重庆: 西南大学, 2018.
GE B. Establishment and application of detection technology for Fusarium spp. in soil[D]. Chongqing: Southwest University, 2018. (in Chinese)
[22]   葛波, 杨洋, 张申萍, 王晓鸣, 陈国康, 段灿星. 禾谷镰孢荧光定量检测体系的建立及其在玉米苗枯病上的应用. 植物保护学报, 2018, 45(3): 409-415.
GE B, YANG Y, ZHANG S P, WANG X M, CHEN G K, DUAN C X. Development of fluorescent quantitative detection system for fungal pathogen Fusarium graminearum and its application in maize seedling blight. Journal of Plant Protection, 2018, 45(3): 409-415. (in Chinese)
[23]   周丹妮. 重庆地区玉米穗腐病致病镰孢鉴定及其产毒能力分析[D]. 重庆: 西南大学, 2017. 
ZHOU D N. Identification of pathogenic Fusarium spp. causing maize ear rot and analysis of their toxigenicity in Chongqing[D]. Chongqing: Southwest University, 2017. (in Chinese)
[24]   邹庆甲, 王树桐, 梁魁景, 王亚南, 胡同乐, 韩之琪, 曹克强. 河北省苹果园土壤中疑似致病镰孢菌种类. 菌物学报, 2014, 33(5): 976-983.
ZOU Q J, WANG S T, LIANG K J, WANG Y N, HU T L, HAN Z Q, CAO K Q. Suspected pathogenic Fusarium spp. isolated from apple orchard soils in Hebei Province. Mycosystema, 2014, 33(5): 976-983. (in Chinese)
[25]   李捷. 甘肃省枸杞根腐病病原及生理生化抗病机理研究[D]. 兰州: 甘肃农业大学, 2015.
LI J. The root rot pathogens of Lycium bararum in Gansu Province and physiological biochemical mechanism of resistance[D]. Lanzhou: Gansu Agricultural University, 2015. (in Chinese)
[26]   Arias M M, Leandro L F, Munkvold G P. Aggressiveness of Fusarium species and impact of root infection on growth and yield of soybeans. Phytopathology, 2013, 103(8): 822-832.
[27]   支叶, 孙菲菲, 孙素丽, 段灿星, 朱振东. 黑龙江省大豆根腐病菌锐顶镰孢鉴定. 中国油料作物学报, 2014, 36(6): 789-793.
ZHI Y, SUN F F, SUN S L, DUAN C X, ZHU Z D. Identification of Fusarium acuminatum causing soybean root rot in Heilongjiang Province. Chinese Journal of Oil Crop Sciences, 2014, 36(6): 789-793. (in Chinese)
[28]   Mesterházy, Lemmens M, Reid L M. Breeding for resistance to ear rots caused by Fusarium spp. in maize-a review. Plant Breeding, 2012, 131(1): 1-19.
[29]   周阳阳, 杨洪一. 玉竹锐顶镰孢菌的生物学特性及药剂防治. 中国农学通报, 2010, 26(9): 315-318.
Zhou Y Y, Yang H Y. Biological characterization and chemical on the control of Fusarium acuminatum pathogen of Polygonatum odoratum. Chinese Agricultural Science Bulletin, 2010, 26(9): 315-318. (in Chinese)
[30]   曾莉莎, 郑芝波, 吕顺, 夏玲, 邓志平, 胡规媛, 杜彩娴, 麦进培, 周建坤. 荷花腐败病病原菌的形态学与多基因分子系统学鉴定. 植物病理学报, 2017, 47(2): 162-173.
ZENG L S, ZHENG Z B, LÜ S, XIA L, DENG Z P, HU G Y, Du C X, MAI J P, ZHOU J K. Identification of pathogen causing rhizome rot of lotus (Nelumbo nucifera) based on morphology and multi-gene sequence analysis.Acta Phytopathologica Sinica, 2017, 47(2): 162-173. (in Chinese)
[31]   朱志贤. 荸荠枯萎病菌病原学、分子检测及防治技术研究[D]. 武汉: 华中农业大学, 2014.
ZHU Z X. Etiology, detection and control ofFusarium wilt of Chinese water chestnut[D]. Wuhan: Huazhong Agricultural University, 2014. (in Chinese)
No related articles found!
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!