中国农业科学 ›› 2019, Vol. 52 ›› Issue (3): 455-465.doi: 10.3864/j.issn.0578-1752.2019.03.006

• 植物保护 • 上一篇    下一篇

黄萎病不同发生程度棉田土壤中的真菌群落特征分析

刘海洋1,王伟1,张仁福1,热西达·阿不都热合曼2,姚举1   

  1. 1 新疆农业科学院植物保护研究所/农业部西北荒漠绿洲作物有害生物综合治理重点实验室,乌鲁木齐 830091
    2 新疆伊宁市农业技术推广站, 新疆伊宁 835000
  • 收稿日期:2018-08-07 接受日期:2018-11-16 出版日期:2019-02-01 发布日期:2019-02-14
  • 通讯作者: 姚举,E-mail:yaoju500@sohu.com
  • 作者简介:刘海洋,E-mail: xaaslhy@126.com
  • 基金资助:
    国家重点研发计划(2017YFD0201106、新疆维吾尔自治区公益性科研院所基本科研业务费KY201807)

Fungal Community Structure of Cotton-Field Soil Under Different Incidences of Cotton Verticillium Wilt

LIU HaiYang1,WANG Wei1,ZHANG RenFu1,RAXIDA ·ABDURAHMAN2,YAO Ju1   

  1. 1 Institute of Plant Protection, Xinjiang Academy of Agricultural Sciences/Key Laboratory of Integrated Pest Management on Crops in Northwestern Oasis, Ministry of Agriculture, Urumqi 830091
    2 Agricultural Technology Extension Station of Yining County, Yining 835000, Xinjiang
  • Received:2018-08-07 Accepted:2018-11-16 Online:2019-02-01 Published:2019-02-14
  • Contact: YAO Ju,E-mail:yaoju500@sohu.com
  • About author:LIU HaiYang,E-mail:xaaslhy@126.com

摘要:

目的 真菌是土壤微生物系统的重要组成部分,对土壤环境变化有明显的指示作用。本研究对黄萎病不同发生程度棉田土壤中的真菌群落特征进行分析,旨在探明大丽轮枝菌(Verticillium dahliae)入侵棉田对土壤中真菌多样性和群落结构的影响,揭示土壤中真菌群落在棉花黄萎病发生过程中的生态作用。方法 以阿克苏、石河子不同发病程度棉田和库尔勒人工接菌棉田为研究对象,从中采集6个土壤样品:阿克苏重病田土壤(AD)、阿克苏对照田土壤(ACK)、石河子重病田土壤(SD)、石河子对照田土壤(SCK)、库尔勒重病田土壤(KD)、库尔勒对照田土壤(KCK)。采用Illumina Hiseq高通量测序技术,研究土壤中真菌的多样性及群落结构,结合冗余分析(RDA)明确真菌群落结构与土壤养分的相关性。结果 在97%相似度水平下,AD和SD样品中真菌的OTU数量、Chao1和Ace丰富度指数均分别高于其对照ACK、SCK,而Simpson指数均分别低于其对照;人工接菌的KD与其对照KCK样品之间OTU数量、Chao1和Ace丰富度指数以及Simpson指数均无显著差异。NMDS分析表明,AD、SD土壤样品首先表现为明显的空间趋向性,之后表现为时间趋向性,而库尔勒土壤样品则首先表现为时间趋向性,其次是空间趋向性。群落组成方面,在门水平上,土壤中Ascomycota的丰度占绝对优势,其次为Basidiomycota和Mortierellomycota,3个门在KD与KCK样品之间以及SD与SCK样品之间的丰度差异较小,而在AD和ACK样品之间丰度差异较大;在属水平上,Sporobolomyces的丰度最高,其与Mortierella在不同区域重病田土壤中丰度均高于对照,而Wardomyces均低于对照。此外,AD样品中PyrenochaetopsisMicrodochiumFusarium的丰度均低于ACK,而此3个属在SD样品中的丰度均高于SCK样品。组间差异显著分析表明,库尔勒、石河子土壤中的显著差异标记均主要富集于重病田中,而阿克苏土壤中显著差异标记主要富集于无病田中。相关性分析表明,土壤中有机质、全氮量与真菌的OTU数量、丰度呈显著正相关,与Simpson指数的相关性低;pH、全磷和全钾与Simpson指数明显正相关,总盐与Simpson指数明显负相关。RDA分析表明,土壤中的真菌群落与有机质、全氮、总盐明显相关。结论 自然重病棉田土壤中真菌的OTU数量、丰度均高于轻病或无病田,而真菌的多样性低。人工接种大丽轮枝菌短期内未对土壤中真菌的丰度、多样性和群落结构造成明显影响。土壤中真菌的多样性、丰度和组成受有机质、全氮、含盐量等指标影响显著。采样时期对土壤中真菌群落结构同样有明显影响。

关键词: 大丽轮枝菌, 棉花黄萎病, 入侵, 棉田土壤, 真菌群落, 高通量测序

Abstract:

【Objective】 Fungus is an important part of soil microbial system, which can obviously indicate the change of soil environment. The objective of this study is to analyze the characteristics of fungal communities in cotton-field soil with different incidences of Verticillium wilt, determine the effect of Verticillium dahliae on the diversity and community structures of fungi in cotton fields, and to reveal the ecological function of fungi community in soil during the occurrence of Verticillium wilt.【Method】 Cotton fields with different incidences of Verticillium wilt in Aksu and Shihezi, and artificially inoculated cotton field in Korla were chosen as research objects. Six soil samples collected from serious diseased fields in Aksu (AD), Korla (KD), Shihezi (SD) and their controls were tested, respectively. Illumina Hiseq high-throughput sequencing technique was used to study the diversity and community structure of fungi in soil. The correlation between fungal community structure and soil nutrients was clarified with redundancy analysis (RDA).【Result】 At the similarity level of 97%, the OTU number, Chao1 and Ace richness index of fungi in AD and SD samples were higher than those of ACK and SCK samples, while the Simpson index was lower than that of control. There was no significant difference in OTU number, Chao1 and Ace richness index and Simpson index between artificially inoculated KD and control KCK samples. NMDS analysis showed that the soil samples of AD and SD had spatial tendency first and then temporal tendency, while the soil samples in Korla had temporal tendency first and then spatial tendency. In terms of community composition, at the phylum level, the abundance of Ascomycota in soil was dominant, followed by Basidiomycota and Mortierellomycota. The abundance differences of the three phylum groups between KD and KCK samples and between SD and SCK samples were relatively small, while those between AD and ACK samples were relatively larger. At the genus level, Sporobolomyces had the highest abundance, and the abundances of both Sporobolomyces and Mortierella were higher than those of the control in the soils of seriously diseased field in different regions, but Wardomyces was lower than that of the control. In addition, the abundance of Pyrenochaetopsis, Microdochium and Fusarium in AD samples was lower than that of ACK samples, while the abundance of these three genera in SD samples was higher than that of SCK samples. The significant difference analysis among groups indicated that the significant difference markers in Korla and Shihezi soils were mainly concentrated in the seriously diseased fields, while in Aksu soils they were mainly concentrated in disease-free fields. Correlation and RDA analysis showed that soil organic matter and total nitrogen content were positively correlated with OTU number and abundance of fungi, but had low correlation with Simpson index. The pH, total phosphorus and total potassium were positively correlated with Simpson index, while total salt was negatively correlated with Simpson index.【Conclusion】 The OTU number and abundance of fungi in the soil of natural seriously diseased cotton fields are higher than those in the control, but the diversity of fungi is low. In the short term, artificial inoculation does not have significant effects on the abundance, diversity and community structure of the fungi in the soil. The diversity, abundance and composition of fungi in soil are significantly affected by the indexes of organic matter, total nitrogen and salt content. The sampling period also has significant effects on the community structure of fungi in soil.

Key words: Verticillium dahliae, cotton Verticillium wilt, invasion, cotton-field soil, fungal community, high-throughput sequencing