中国农业科学 ›› 2010, Vol. 43 ›› Issue (5): 1057-1065 .doi: 10.3864/j.issn.0578-1752.2010.05.022

• 畜牧·资源昆虫 • 上一篇    下一篇

中国荷斯坦牛白介素8受体基因编码区多态性与乳腺炎的关联分析

官久强,王洪梅,王长法,李秋玲,李建斌,帅素容,侯明海,仲跻峰

  

  1. (山东省农业科学院奶牛研究中心)
  • 收稿日期:2009-10-23 修回日期:2009-12-22 出版日期:2010-03-01 发布日期:2010-03-01
  • 通讯作者: 仲跻峰

Genetic Polymorphisms Within the Coding Regions of IL8R Gene and Its Association with Mastitis Trait in Chinese Holstein Cattle

GUAN Jiu-qiang, WANG Hong-mei, WANG Chang-fa, LI Qiu-ling, Li Jian-bin, SHUAI Su-rong, HOU Ming-hai, ZHONG Ji-feng
  

  1. (山东省农业科学院奶牛研究中心)
  • Received:2009-10-23 Revised:2009-12-22 Online:2010-03-01 Published:2010-03-01
  • Contact: ZHONG Ji-feng

摘要:

【目的】通过研究中国荷斯坦牛白介素8受体的亚基A和B(IL8RA和IL8RB)基因编码区多态性与乳腺炎的关联性,找到与乳腺炎相关SNPs,为乳腺炎抗性分子育种提供可用的分子标记。【方法】采用巢氏PCR、DNA测序和CRS-PCR-RFLP方法,对中国荷斯坦牛的IL8RA和IL8RB编码区的遗传多态性进行了研究,分别利用SHEsis 软件和PHASE软件进行配对连锁不平衡分析和单倍型分析。【结果】找到了8个SNPs,其中5个为新SNPs,分别为IL8RA的980(G/A)、995(G/A)和1008(C/T)和IL8RB的938(C/T)、959(C/T),这8个位点均不连锁。对IL8RA和IL8RB的单倍型分析发现,单倍型频率大于0.01的有15种。各SNPs与中国荷斯坦牛体细胞评分(SCS)和产奶量的关联分析表明,IL8RA 735(C/G)、816(C/A)、819(A/G)位点与SCS、产奶量相关,IL8RA的735(C/G)、 816(C/A)、819(A/G)位点的C、C、G等位基因和IL8RB的938(C/T)、959(C/T)位点的T等位基因均为低SCS、高产奶量的优秀等位基因。另外,IL8RA的CCGAAC单倍型纯合个体的SCS极显著低于CAGGGT和GCAGGC单倍型纯合个体(P<0.01),而其305 d产奶量极显著高于另外两种单倍型纯合子;IL8RB CT单倍型纯合个体的SCS显著低于CC、TC和TT单倍型个体,其305 d产奶量显著或极显著高于其余3种单倍型。【结论】IL8RA和IL8RB的单倍型CCGAAC和 CT在SCS 和产奶量方面是优良的单倍型,可作为选择抗乳腺炎的分子标记。

关键词: 中国荷斯坦牛, 白介素8受体基因, 单倍型, 优良等位基因, 乳腺炎抗性

Abstract:

【Objective】 Through the method of genetic breeding to improve the mastitis resistance and reduce its incidence, and find the candidate genes associated with mastitis. 【Method】 The single nucleotide polymorphisms (SNPs) within the coding regions of IL8RA and IL8RB genes in Holstein cattle were investigated by nested-PCR, DNA sequencing and CRS-PCR. The PHASE and SHEsis software was used as matching chain disequilibrium and haplotype analysis, respectively. 【Result】 Eight SNPs not linking were found, in which five SNPs were 980(G/A), 995(G/A), 1008(C/T) of IL8RA and 938(C/T), 959(C/T) of IL8RB were reported for the first time. Haplotype analysis of IL8RA and IL8RB genes showed that fifteen haplotypes frequencies more than 0.01. The assocaition analysis of SNPs with the Chinese Holstein cattle somatic cell score (SCS) and milk yield showed that: 735(C/G), 816(C/A), and 819(A/G) loci of IL8RA gene had related with the SCS and milk yield, the C, C, G alleles of 735(C/G), 816(C/A), and 819(A/G) sites in IL8RA and T allele of 938(C/T), 959(C/T) locus in IL8RB gene were excellent allele with lower SCS, higher milk yield. In addition, the SCS of CCGAAC haplotype homozygous in IL8RA gene individuals was significantly lower than that CAGGGT and GCAGGC haplotype homozygous individuals (P<0.01), while the 305 d milk yield was significantly higher than the other two haplotype. The SCS of haplotype CT homozygous individuals in IL8RB gene was significantly lower than CC, TC and TT haplotype individuals, while the 305 d milk yield of haplotype CT homozygous individuals was significantly higher than the other three haplotype individuals. 【Conclusion】 The haplotypes CCGAAC and CT of IL8RA and IL8RB gene are excellent haplotypes in the SCS and milk production quantity and can be used as selection markers of remastitis.

Key words: Chinese Holstein cattle, interleukin-8 receptor gene, haplotype, excellent alleles, mastitis resistance