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A genome-wide association study and transcriptome analysis reveal the genetic basis for the Southern corn rust resistance in maize
Yang Wang, Chunhua Mu, Xiangdong Li, Canxing Duan, Jianjun Wang, Xin Lu, Wangshu Li, Zhennan Xu, Shufeng Sun, Ao Zhang, Zhiqiang Zhou, Shenghui Wen, Zhuanfang Hao, Jienan Han, Jianzhou Qu, Wanli Du, Fenghai Li, Jianfeng Weng
2025, 24 (2): 453-466.   DOI: 10.1016/j.jia.2023.10.039
Abstract138)      PDF in ScienceDirect      
Southern corn rust (SCR) is an airborne fungal disease caused by Puccinia polysora Underw. (Ppolysora) that adversely impacts maize quality and yields worldwide.  Screening for new elite SCR-resistant maize loci or genes has the potential to enhance overall resistance to this pathogen.  Using phenotypic SCR resistance-related data collected over two years and three geographical environments, a genome-wide association study was carried out in this work, which eventually identified 91 loci that were substantially correlated with SCR susceptibility.  These included 13 loci that were significant in at least three environments and overlapped with 74 candidate genes (B73_RefGen_v4).  Comparative transcriptomic analyses were then performed to identify the genes related to SCR infection, with 2,586 and 797 differentially expressed genes (DEGs) ultimately being identified in the resistant Qi319 and susceptible 8112 inbred lines following Ppolysora infection, respectively, including 306 genes common to both lines.  Subsequent integrative multi-omics investigations identified four potential candidate SCR response-related genes.  One of these genes is ZmHCT9, which encodes the protein hydroxycinnamoyl transferase 9.  This gene was up-regulated in susceptible inbred lines and linked to greater Ppolysora resistance as confirmed through cucumber mosaic virus (CMV)-based virus induced-gene silencing (VIGS) system-mediated gene silencing.  These data provide important insights into the genetic basis of the maize SCR response.  They will be useful for for future research on potential genes related to SCR resistance in maize.


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Identification of a novel multi-drug resistant plasmid co-harbouring extended-spectrum β-Lactamase resistance genes blaPER-4 and blaOXA-10 in Moellerella wisconsensis of sheep
Xueliang Zhao, Yongqiang Miao, Hongmei Chen, Honghu Shan, Juan Wang, Yang Wang, Jianzhong Shen, Zengqi Yang
2024, 23 (9): 3238-3242.   DOI: 10.1016/j.jia.2024.03.040
Abstract86)      PDF in ScienceDirect      
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Effects of 1-methylcyclopropene on skin greasiness and quality of ‘Yuluxiang’ pear during storage at 20°C
Wanting Yu, Xinnan Zhang, Weiwei Yan, Xiaonan Sun, Yang Wang, Xiaohui Jia
2024, 23 (7): 2476-2490.   DOI: 10.1016/j.jia.2024.03.017
Abstract82)      PDF in ScienceDirect      

During storage at 20°C, specific pear cultivars may exhibit a greasy texture and decline in quality due to fruit senescence. Among these varieties, ‘Yuluxiang’ is particularly susceptible to peel greasiness, resulting in significant economic losses. Therefore, there is an urgent need for a preservative that can effectively inhibit the development of greasiness. Previous studies have demonstrated the efficacy of 1-methylcyclopropene (1- MCP) in extending the storage period of fruits. We hypothesize that it may also influence the occurrence of postharvest peel greasiness in the ‘Yuluxiang’ pears. In this study, we treated ‘Yuluxiang’ pears with 1-MCP. We stored them at 20°C while analyzing the composition and morphology of the surface waxes, recording enzyme activities related to wax synthesis, and measuring indicators associated with fruit storage quality and physiological characteristics. The results demonstrate that prolonged storage at 20°C leads to a rapid increase in skin greasiness, consistent with the observed elevations in L*, greasiness score, and the content of total wax and greasy wax components. Moreover, there were indications that cuticular waxes underwent melting, resulting in the formation of an amorphous structure. In comparison to controls, the application of 1-MCP significantly inhibited increments in L* values as well as grease scores while also reducing accumulation rates for oily waxes throughout most stages over its shelf period, additionally delaying transitions from flaky-wax structures towards their amorphous counterparts. During the initial 7 d of storage, several enzymes involved in the biosynthesis and metabolism of greasy wax components, including lipoxygenase (LOX), phospholipase D (PLD), and β-ketoacyl-CoA synthase (KCS), exhibited an increase followed by a subsequent decline. The activity of LOX during early shelf life (0–7 d) and the KCS activity during middle to late shelf life (14–21 d) were significantly suppressed by 1-MCP. Additionally, 1-MCP effectively maintained firmness, total soluble solid (TSS) and titratable acid (TA) contents, peroxidase (POD), and phenylalanine ammonia-lyase (PAL) activities while inhibiting vitamin C degradation and weight loss. Furthermore, it restrained polyphenol oxidase (PPO) activity, ethylene production, and respiration rate increase. These findings demonstrate that 1-MCP not only delays the onset of peel greasiness but also preserves the overall storage quality of ‘Yuluxiang’ pear at a temperature of 20°C. This study presents a novel approach for developing new preservatives to inhibit pear fruit peel greasiness and provides a theoretical foundation for further research on pear fruit preservation.

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Identification and characterization of a plasmid co-harboring blaCTX-M-55 and blaTEM-141 in Escherichia albertii from broiler in China
Weiqi Guo, Di Wang, Xinyu Wang, Zhiyang Wang, Hong Zhu, Jiangang Hu, Beibei Zhang, Jingjing Qi, Mingxing Tian, Yanqing Bao, Na Li, Wanjiang Zhang, Shao-hui Wang
DOI: 10.1016/j.jia.2023.12.038 Online: 19 January 2024
Abstract16)      PDF in ScienceDirect      
The inappropriate use of cephalosporins lead to the occurrence and global spread of bacteria resistant to these antimicrobials. In this study, we isolated four Escherichia albertii (E. albertii) strains from broilers in Eastern China. The antimicrobial susceptibility and genomic characterization of these E. albertii isolates were determined. Our results revealed that these four E. albertii isolates exhibited resistance to tetracyclines, chloramphenicol, β-lactams, aminoglycosides, polymyxin B, sulfonamides, quinolones, and other antimicrobials. Among them, EA04 isolate was multidrug resistant and harbored extended-spectrum β-lactamases (ESBL) genes blaCTX-M and blaTEM. Whole genome sequencing and core-genome Multilocus sequence typing (cgMLST) based on all ST4638 E. albertii for EA04 inferred highly probable epidemiological links between selected human isolates. Additionally, the ESBL genes blaTEM-141 and blaCTX-M-55 were coexistent in an approximately 75 kb IncFII plasmid pEA04.2 in EA04. Comparative analysis indicated that genes blaTEM-141 and blaCTX-M-55 were located in IS15-blaCTX-M-55-wbuC-blaTEM-141-IS26 region, which similar structures were identified in various bacteria. Furthermore, the plasmid pEA04.2 could be transferable to Escherichia coli EC600 and lead to the resistance to third-generation cephalosporins. These results suggested that chicken potentially serve as a reservoir for multidrug resistant E. albertii, which increases the risk of horizontal transfer of antimicrobial resistance between humans, animals and environment.
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A novel TLR7 agonist exhibits antiviral activity against pseudorabies virus
Yue Song, Heng Wang, Mingyang Wang, Yumin Wang, Xiuxiang Lu, Wenjie Fan, Chen Yao, Pengxiang Liu, Yanjie Ma, Shengli Ming, Mengdi Wang, Lijun Shi
DOI: 10.1016/j.jia.2024.07.001 Online: 08 July 2024
Abstract22)      PDF in ScienceDirect      

Innate immunity is the primary defense against viral infections, with Toll-like receptors (TLRs) playing a crucial role in this process. This study aims to highlight the effectiveness of a pyrrolo[3,2-d]pyrimidine derivative (named TLR713), a potential TLR7 agonist, in inhibiting pseudorabies virus (PRV) replication both in vitro and in vivo. Tests on PK-15 cells demonstrated that TLR713 had no significant impact on cell viability, cell cycle progression, or apoptosis at concentrations of 0 – 3 μmol L-1. TLR713 could promote the phosphorylation of IκBα, p38, and JNK through TLR7, and increase the expression of inflammatory cytokines. In vitro, when cells were treated with TLR713, PRV proliferation was inhibited via TLR7 pathway. Analysis of the viral life cycle indicated that TLR713 could inhibit the replication of PRV, but not affect viral attachment, entry, assembly, or release. In vivo, TLR713 showed no side effects on mice at a concentration of 25 mg kg-1. It improved the survival rate of PRV-infected mice, reduced tissue viral load, and alleviated the inflammatory response. In summary, this study highlights the potential of TLR713 as a novel TLR7 agonist capable of inhibiting PRV replication and may offer new opportunities for developing antiviral therapies.

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Targeting ThyA: Investigating the mechanisms of 5-FU-induced inhibition of biofilm formation and virulence in Streptococcus suis through LuxS/AI-2 quorum sensing
Jing Zuo, Yingying Quan, Yue Li, Dong Song, Jinpeng Li, Yuxin Wang, Li Yi, Yang Wang
DOI: 10.1016/j.jia.2024.07.007 Online: 08 July 2024
Abstract37)      PDF in ScienceDirect      

Streptococcus suis is a significant zoonotic agent affecting both human and pig health and poses a substantial public health concern. The pathogenicity of S. suis is intricately linked to its ability to form biofilms and express virulence factors, which are regulated by the LuxS/AI-2 quorum sensing (QS) system. Herein, we uncover a novel therapeutic avenue by demonstrating that 5-fluorouracil (5-FU), an FDA-approved anti-cancer agent, effectively mitigates biofilm formation and attenuates the virulence of S. suis. Mechanistically, we observe a significant reduction in capsular polysaccharide and extracellular polysaccharide production upon 5-FU treatment, elucidating a potential mechanism for biofilm weakening. Additionally, 5-FU down-regulates virulence traits, diminishing S. suis's ability to adhere to host cells and evade phagocytosis. Crucially, our study identifies the thymidylate synthase regulatory gene thyA as a key mediator of 5-FU's effects on the LuxS/AI-2 QS system. Virtual molecular docking and gene knockout experiments provide compelling evidence that 5-FU modulates the LuxS/AI-2 QS system by targeting thyA. In vivo experiments further validate the therapeutic potential of 5-FU, showcasing a significant reduction in bacterial load and mitigation of tissue damage in a mouse model. In conclusion, our investigation unveils 5-FU as a potent disruptor of S. suis's biofilm formation and virulence, offering a promising avenue for the control of this devastating pathogen.

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Species-specific evolution of lepidopteran TspC5 tetraspanins associated with dominant resistance to Bacillus thuringiensis toxin Cry1Ac
Chenyang Wang, Yinuo Zhang, Qiming Sun, Lin Li, Fang Guan, Yazhou He, Yidong Wu
DOI: 10.1016/j.jia.2024.09.022 Online: 24 September 2024
Abstract13)      PDF in ScienceDirect      

Transgenic crops producing insecticidal proteins from the bacterium Bacillus thuringiensis (Bt) have proven to be highly effective in managing some key pests. However, the evolution of resistance by the target pests threatens the sustainability of Bt crops. The L31S mutation in a tetraspanin encoded by HarmTspC5 (previously known as HaTSPAN1has been shown to confer dominant resistance to the Bt protein Cry1Ac in Helicoverpa armigera, a globally damaging lepidopteran pest. However, the broader implications of the L31S mutation in the tetraspanins of other lepidopteran species remain unclear. The evolutionary analyses in this study indicate that TspC5s have evolved in a species-specific manner among the lepidopteran insects. To investigate the role of TspC5s in conferring dominant resistance to Cry1Ac, we used the piggyBac-based transformation system to generate four transgenic H. armigera strains that express exogenous TspC5 variants from three phylogenetically close species (Helicoverpa zea, Helicoverpa assulta and Heliothis virescensand one phylogenetically distant species (Plutella xylostella). In comparison with the background SCD strain of H. armigerathe transgenic strains expressing HzeaTspC5-L31S, HassTspC5-L31S, or HvirTspC5-L31S exhibited significant resistance to Cry1Ac (10.0-, 21.4-, and 81.1-fold, respectively), whereas the strain expressing PxylTspC5-L27S remained susceptible. Furthermore, the Cry1Ac resistanphenotypes followed an autosomal dominant inheritance pattern and were closely linked to the introduced mutant TspC5s. These findings reveal the conserved role of TspC5s from Helicoverpa and Heliothis species in mediating the dominant resistance to Cry1Acand they provide crucial insights for assessing resistance risks related to mutant tetraspanins and devising adaptive resistance management strategies for these major lepidopteran pests.

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Genome-wide characterization of soybean lysophosphatidic acid acyltransferases and functional characterization of the role of GmLPAT11 in salt stress
Zhiyang Wang, Peiyan Liu, Haitong Sun, Wenying Suo, Ziqian Cheng, Mingliang Yang, Qingshan Chen, Ying Zhao
DOI: 10.1016/j.jia.2024.12.031 Online: 02 January 2025
Abstract6)      PDF in ScienceDirect      

Lysophosphatidic acid acyltransferases (LPATs) are enzymes widely expressed in various plant species, contributing to growth, development, and stress responses.  Currently, little information regarding the LPAT gene family is available in soybeans.  In this study, genome-wide analyses identified 15 soybean LPATs, which were then evaluated for the conserved protein motifs.  These genes were grouped into three clusters based on their phylogenetic relationships.  Confocal microscopy was used to visualize the localization of six GmLPATs within Arabidopsis mesophyll protoplasts.  cis-Acting regulatory element analyses and qRT-PCR experiments revealed that these GmLPATs were upregulated in response to hormone stimulation or exposure to abiotic stressors, including drought, alkaline conditions, and salt stress.  The expression patterns of these GmLPATs varied across different soybean tissue types.  One member of the solLPAT1 subtype (GmLPAT11) was found to be upregulated in response to a range of treatments, highlighting its role in soybean salt stress responses. GmLPAT11 expression in Escherichia coli confirmed the LPAT activity of this recombinant enzyme, and overexpressing this LPAT reduced reactive oxygen species production in transgenic soybean plants, enhancing their salt stress tolerance.  Gene association analyses indicated that GmLPAT11 variants are closely associated with seedling salt tolerance, and a polymorphism in the GmLPAT11 CDS region was potentially associated with salt tolerance.  These results provide new insight into the nature of the LPAT gene family in soybeans while also suggesting promising candidate genes for future research efforts aimed at enhancing the overall salt tolerance of soybean crops. 

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Screening and evaluation of plant-derived attractants for Loxostege sticticalis adult management
Hongnian Li, Ertao Li, Aiguo Kang, Kebin Li, Lei Zhang, Huanhuan Dong, Zhimin Wang, Yangyang Wang, Byambasuren Mijidsuren, Fei Hu, Jiao Yin, Zhaojun Wei
DOI: 10.1016/j.jia.2025.04.034 Online: 27 April 2025
Abstract3)      PDF in ScienceDirect      

The Loxostege sticticalis (Lepidoptera: Pyralidae) is a major migratory pest of agriculture and animal husbandry in Asia and Europe. Utilizing plant volatile organic compounds (pVOCs) as attractants for monitoring and controlling pests is considered an environmentally friendly and effective method. However, limited knowledge exists regarding applying pVOCs to manage L. sticticalis. Here, volatile compounds released by Chenopodium album, Setaria viridis, and Medicago sativa, the three preferred oviposition plants for L. sticticalis females, were collected using dynamic headspace sampling techniques. A total of 55 distinct compounds were identified through gas chromatography-mass spectrometry (GC-MS), and 16 compounds in the concentration range from 0.001 to 100 µg µL-1 elicited consistently enhanced electrophysiological responses in both male and female L. sticticalis. Subsequently, the attraction potential of four bioactive compoundslinalool, cis-anethole, trans-2-hexenal, and 1-octen-3-olwere further confirmed by indoor behavioral bioassays. The blends of linalool, cis-anethole, trans-2-hexenal, and 1-octen-3-ol mixed at ratios of 5:1:5:10 (formulation No. 25) and 5:1:1:10 (formulation No. 21) were highly attractive to L. sticticalis adults. Field-trapping assays indicated that lure No. 2 baited with formulation 21 demonstrated superior efficacy in field trapping. These findings suggest that pVOC-based attractants can be effectively employed for monitoring and mass trapping L. sticticalis adults, providing insights into the development of botanical attractants.

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