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| The rhizosphere microbial complex in plant health: A review of interaction dynamics |
| Oluwaseyi Samuel OLANREWAJU, Olubukola Oluranti BABALOLA |
| Food Security and Safety Focus Area, Faculty of Natural and Agricultural Sciences, North-West University, Mmabatho 2735, South Africa |
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Abstract Climate change, urbanization, and population increase limit food availability. To sustain human existence, there is the need to increase food and agricultural production to mitigate the impact of these factors. Scientists have been working for years on ways to increase food production. From plant breeding techniques to soil science, scientists have made tremendous progress. The rhizobiome has been proven to be important to crop production, and the impact of the rhizobiome on plant health cannot be overemphasized. Being rich in diverse complex microbial interactions, the rhizosphere has become a major force in recent plant growth promotion studies. The upsurge in next-generation sequencing applications with the various “omics” technologies is helping to unearth information relating to rhizosphere impact on plant growth. Explaining the complex interactions between and across microbial species present in the rhizosphere is important to further enhance our understanding of their mechanistic and mutualistic functions. Knowledge from this can be used in rhizosphere biome engineering for improved plant growth and yield in the face of the various biotic and abiotic challenges.
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Received: 21 April 2021
Accepted: 19 August 2021
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Fund: The research was funded by the National Research Foundation (NRF) of South Africa (UID123634 and UID132595) which was granted to Olubukola O. Babalola.
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| About author: Correspondence Olubukola Oluranti Babalola, E-mail: olubukola.babalola@nwu.ac.za |
Cite this article:
Oluwaseyi Samuel OLANREWAJU, Olubukola Oluranti BABALOLA.
2022.
The rhizosphere microbial complex in plant health: A review of interaction dynamics. Journal of Integrative Agriculture, 21(8): 2168-2182.
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Abbas R, Rasul S, Aslam K, Baber M, Shahid M, Mubeen F, Naqqash T. 2019. Halotolerant pgpr: A hope for cultivation of saline soils. Journal of King Saud University (Science), 31, 1195–1201.
Argov T, Azulay G, Pasechnek A, Stadnyuk O, Ran-Sapir S, Borovok I, Sigal N, Herskovits A A. 2017. Temperate bacteriophages as regulators of host behavior. Current Opinion in Microbiology, 38, 81-87.
Ahemad M, Kibret M. 2014. Mechanisms and applications of plant growth promoting rhizobacteria: Current perspective. Journal of King Saud University (Science), 26, 1–20.
Ahrenholtz I, Harms K, de Vries J, Wackernagel W. 2000. Increased killing of Bacillus subtilis on the hair roots of transgenic T4 lysozyme-producing potatoes. Applied and Environmental Microbiology, 66 , 1862–1865.
Alexander A, Mishra A, Jha B. 2019. Halotolerant rhizobacteria: A promising probiotic for saline soil-based agriculture. In: Kumar M, Etesami H, Kumar V, eds., Saline Soil-based Agriculture by Halotolerant Microorganisms. Springer, Singapore. pp. 53–73.
Alori E T, Glick B R, Babalola O O. 2017. Microbial phosphorus solubilization and its potential for use in sustainable agriculture. Frontiers in Microbiology, 8, 971.
Alzubaidy H, Essack M, Malas T B, Bokhari A, Motwalli O, Kamanu F K, Jamhor S A, Mokhtar N A, Antunes A, Simões M F, Alam I, Bougouffa S, Lafi F F, Bajic V B, Archer J A. 2016. Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea. Gene, 576, 626–636.
Babalola O O, Ayangbenro A S, Olanrewaju O S. 2019. Draft genome sequences of three rhizospheric plant growth-promoting bacteria. Microbiology Resource Announcements, 8, e00455–00419.
Babalola O O, Olanrewaju O S, Dias T, Ajilogba C F, Kutu F R, Cruz C. 2017. Biological nitrogen fixation: The role of underutilized leguminous plants. In: Panpatte D, Jhala Y, Vyas R, Shelat H, eds., Microorganisms for Green Revolution. Springer, Singapore. pp. 431–443.
Backer R, Rokem J S, Ilangumaran G, Lamont J, Praslickova D, Ricci E, Subramanian S, Smith D L. 2018. Plant growth-promoting rhizobacteria: Context, mechanisms of action, and roadmap to commercialization of biostimulants for sustainable agriculture. Frontiers in Plant Science, 9, 1473.
Bais H P, Weir T L, Perry L G, Gilroy S, Vivanco J M. 2006. The role of root exudates in rhizosphere interactions with plants and other organisms. Annual Review in Plant Biology, 57, 233–266.
Bakhshandeh E, Pirdashti H, Shahsavarpour Lendeh K, Gilani Z, Yaghoubi Khanghahi M, Crecchio C. 2020. Effects of plant growth promoting microorganisms inoculums on mineral nutrition, growth and productivity of rice (Oryza sativa L.). Journal of Plant Nutrition, 43, 1643–1660.
Baudoin E, Lerner A, Mirza M S, El Zemrany H, Prigent-Combaret C, Jurkevich E, Spaepen S, Vanderleyden J, Nazaret S, Okon Y, Moënne-Loccoz Y. 2010. Effects of Azospirillum brasilense with genetically modified auxin biosynthesis gene ipdC upon the diversity of the indigenous microbiota of the wheat rhizosphere. Research in Microbiology, 161, 219–226.
Beneduzi A, Ambrosini A, Passaglia L M. 2012. Plant growth-promoting rhizobacteria (PGPR): Their potential as antagonists and biocontrol agents. Genetics and Molecular Biology, 35, 1044–1051.
Berendsen R L, Pieterse C M, Bakker P A. 2012. The rhizosphere microbiome and plant health. Trends in Plant Science, 17, 478–486.
Billah M, Khan M, Bano A, Hassan T U, Munir A, Gurmani A R. 2019. Phosphorus and phosphate solubilizing bacteria: Keys for sustainable agriculture. Geomicrobiology Journal, 36, 904–916.
Castaldi S, Petrillo C, Donadio G, Piaz F D, Cimmino A, Masi M, Evidente A, Isticato R. 2021. Plant growth promotion function of Bacillus sp. strains isolated from salt-pan rhizosphere and their biocontrol potential against Macrophomina phaseolina. International Journal of Molecular Sciences, 22, 3324.
Cohen A C, Bottini R, Pontin M, Berli F J, Moreno D, Boccanlandro H, Travaglia C N, Piccoli P N. 2015. Azospirillum brasilense ameliorates the response of Arabidopsis thaliana to drought mainly via enhancement of ABA levels. Physiologia Plantarum, 153, 79–90.
David L, Harmon A C, Chen S. 2019. Plant immune responses-from guard cells and local responses to systemic defense against bacterial pathogens. Plant Signaling & Behavior, 14, e1588667.
Dey R, Pal K, Bhatt D, Chauhan S. 2004. Growth promotion and yield enhancement of peanut (Arachis hypogaea L.) by application of plant growth-promoting rhizobacteria. Microbiological Research, 159, 371–394.
Di D W, Zhang C, Luo P, An C W, Guo G Q. 2016. The biosynthesis of auxin: How many paths truly lead to IAA? Plant Growth Regulation, 78, 275–285.
Dion M B, Oechslin F, Moineau S. 2020. Phage diversity, genomics and phylogeny. Nature Review Microbiology, 18, 125–138.
Doughari J. 2015. An overview of plant immunity. Journal of Plant Pathology and Microbiology, 6, 322.
Dukare A, Paul S. 2021. Biological control of Fusarium wilt and growth promotion in pigeon pea (Cajanus cajan) by antagonistic rhizobacteria, displaying multiple modes of pathogen inhibition. Rhizosphere, 17, 100278.
Dunlap C, Bowman M, Rooney A P. 2019. Iturinic lipopeptide diversity in the Bacillus subtilis species group - Important antifungals for plant disease biocontrol applications. Frontiers in Microbiology, 10, 1794.
Egamberdiyeva D. 2007. The effect of plant growth promoting bacteria on growth and nutrient uptake of maize in two different soils. Applied Soil Ecology, 36, 184–189.
Eitas T K, Dangl J L. 2010. NB-LRR proteins: Pairs, pieces, perception, partners, and pathways. Current Opinion in Plant Biology, 13, 472–477.
Esitken A, Yildiz H E, Ercisli S, Donmez M F, Turan M, Gunes A. 2010. Effects of plant growth promoting bacteria (PGPB) on yield, growth and nutrient contents of organically grown strawberry. Scientia Horticulturae, 124, 62–66.
Fazeli-Nasab B, Sayyed R. 2019. Plant growth-promoting rhizobacteria and salinity stress: A journey into the soil. In: Sayyed R, Arora N, Reddy M, eds., Plant Growth Promoting Rhizobacteria For Sustainable Stress Management. Springer, Singapore. pp. 21–34.
Ferreira M J, Silva H, Cunha A. 2019. Siderophore-producing rhizobacteria as a promising tool for empowering plants to cope with iron limitation in saline soils: A review. Pedosphere, 29, 409–420.
Figueiredo M V, Burity H A, Martinez C R, Chanway C P. 2008. Alleviation of drought stress in the common bean (Phaseolus vulgaris l.) by co-inoculation with Paenibacillus polymyxa and Rhizobium tropici. Applied Soil Ecology, 40, 182–188.
Fredeen A L, Raab T K, Rao I M, Terry N. 1990. Effects of phosphorus nutrition on photosynthesis in Glycine max (L.) Merr. Planta, 181, 399–405.
Gaba V P. 2005. Plant growth regulators in plant tissue culture and development. In: Robert N Trigiano, Dennis J G, eds., Plant Development and Biotechnology. CRC Press, Boca Raton, FL. pp. 87–99.
Gamalero E, Marzachì C, Galetto L, Veratti F, Massa N, Bona E, Novello G, Glick B, Ali S, Cantamessa S. 2017. An 1-aminocyclopropane-1-carboxylate (ACC) deaminase-expressing endophyte increases plant resistance to Flavescence dorée phytoplasma infection. Plant Biosystems - An International Journal Dealing with all Aspects of Plant Biology, 151, 331–340.
Gao Z, Karlsson I, Geisen S, Kowalchuk G, Jousset A. 2019. Protists: Puppet masters of the rhizosphere microbiome. Trends in Plant Science, 24, 165–176.
Ghavami N, Alikhani H A, Pourbabaei A A, Besharati H. 2017. Effects of two new siderophore-producing rhizobacteria on growth and iron content of maize and canola plants. Journal of Plant Nutrition, 40, 736–746.
Glick B R. 2014. Bacteria with ACC deaminase can promote plant growth and help to feed the world. Microbiological Research, 169, 30–39.
Glick B R, Todorovic B, Czarny J, Cheng Z, Duan J, McConkey B. 2007. Promotion of plant growth by bacterial ACC deaminase. Critical Reviews in Plant Sciences, 26, 227–242.
Guo Q, Sun Y, Shi M, Han X, Jing Y, Li Y, Li H, Lai H. 2021. Pseudomonas koreensis promotes tomato growth and shows potential to induce stress tolerance via auxin and polyphenol-related pathways. Plant and Soil, 462, 141–158.
Gupta P, Roy S, Nandi A K. 2020. Medea-interacting protein long-chain base kinase 1 promotes pattern-triggered immunity in Arabidopsis thaliana. Plant Molecular Biology, 103, 173–184.
Gupta S, Pandey S. 2019. Unravelling the biochemistry and genetics of ACC deaminase - An enzyme alleviating the biotic and abiotic stress in plants. Plant Gene, 18, 100175.
Hakim S, Naqqash T, Nawaz M S, Laraib I, Siddique M J, Zia R, Mirza M S, Imran A. 2021. Rhizosphere engineering with plant growth-promoting microorganisms for agriculture and ecological sustainability. Frontiers in Sustainable Food Systems, 5, 16.
Hassani M A, Özkurt E, Seybold H, Dagan T, Stukenbrock E H. 2019. Interactions and coadaptation in plant metaorganisms. Annual Review of Phytopathology, 57, 483–503.
Hayden H L, Savin K W, Wadeson J, Gupta V V, Mele P M. 2018. Comparative metatranscriptomics of wheat rhizosphere microbiomes in disease suppressive and non-suppressive soils for Rhizoctonia solani Ag8. Frontiers in Microbiology, 9, 859.
Honma M, Shimomura T. 1978. Metabolism of 1-aminocyclopropane-1-carboxylic acid. Agricultural and Biological Chemistry, 42, 1825–1831.
Ilangumaran G, Smith D L. 2017. Plant growth promoting rhizobacteria in amelioration of salinity stress: A systems biology perspective. Frontiers in Plant Science, 8, 1768.
Jeon J S, Lee S S, Kim H Y, Ahn T S, Song H G. 2003. Plant growth promotion in soil by some inoculated microorganisms. Journal of Microbiology, 41, 271–276.
Jones J D, Dangl J L. 2006. The plant immune system. Nature, 444, 323–329.
Kaushal M, Wani S P. 2016. Plant-growth-promoting rhizobacteria: Drought stress alleviators to ameliorate crop production in drylands. Annals of Microbiology, 66, 35–42.
Ke X, Feng S, Wang J, Lu W, Zhang W, Chen M, Lin M. 2019. Effect of inoculation with nitrogen-fixing bacterium Pseudomonas stutzeri A1501 on maize plant growth and the microbiome indigenous to the rhizosphere. Systematic and Applied Microbiology, 42, 248–260.
Kechid M, Desbrosses G, Rokhsi W, Varoquaux F, Djekoun A, Touraine B. 2013. The nrt 2.5 and nrt 2.6 genes are involved in growth promotion of Arabidopsis by the plant growth-promoting rhizobacterium (PGPR) strain Phyllobacterium brassicacearum Stm 196. New Phytologist, 198, 514–524.
Khan M S, Ullah M, Ahmad W, Shah S U A. 2020a. The use of modern technologies to combat stripe rust in wheat. Romanian Biotechnological Letters, 25, 1281–1288.
Khan N, Bano A, Ali S, Babar M A. 2020b. Crosstalk amongst phytohormones from planta and pgpr under biotic and abiotic stresses. Plant Growth Regulation, 90, 189–203.
Knox J, Hess T, Daccache A, Wheeler T. 2012. Climate change impacts on crop productivity in Africa and South Asia. Environmental Research Letters, 7, 034032.
Korenblum E, Dong Y, Szymanski J, Panda S, Jozwiak A, Massalha H, Meir S, Rogachev I, Aharoni A. 2020. Rhizosphere microbiome mediates systemic root metabolite exudation by root-to-root signaling. Proceedings of the National Academy of Sciences of the United States of America, 117, 3874–3883.
Kroer N, Barkay T, Sørensen S, Weber D. 1998. Effect of root exudates and bacterial metabolic activity on conjugal gene transfer in the rhizosphere of a marsh plant. FEMS Microbiology Ecology, 25, 375–384.
Kumar P, Thakur S, Dhingra G, Singh A, Pal M K, Harshvardhan K, Dubey R, Maheshwari D. 2018. Inoculation of siderophore producing rhizobacteria and their consortium for growth enhancement of wheat plant. Biocatalysis and Agricultural Biotechnology, 15, 264–269.
Kumari S, Bharat N K. 2018. In vitro screening and efficacy of plant growth promoting rhizobacteria and biocontrol agents in bell pepper (Capsicum annuum L.). Journal of Pharmacognosy and Phytochemistry, 7, 1472–1475.
Lamb T G, Tonkyn D W, Kluepfel D A. 1996. Movement of Pseudomonas aureofaciens from the rhizosphere to aerial plant tissue. Canadian Journal of Microbiology, 42, 1112–1120.
Lee C G, Iida T, Uwagaki Y, Otani Y, Nakaho K, Ohkuma M. 2017. Comparison of prokaryotic and eukaryotic communities in soil samples with and without tomato bacterial wilt collected from different fields. Microbes and Environments, 32, 376–385.
Lee S, Trịnh C S, Lee W J, Jeong C Y, Truong H A, Chung N, Kang C S, Lee H. 2020. Bacillus subtilis strain l1 promotes nitrate reductase activity in Arabidopsis and elicits enhanced growth performance in Arabidopsis, lettuce, and wheat. Journal of Plant Research, 133, 231–244.
Liu F, Hewezi T, Lebeis S L, Pantalone V, Grewal P S, Staton M E. 2019. Soil indigenous microbiome and plant genotypes cooperatively modify soybean rhizosphere microbiome assembly. BMC Microbiology, 19, 201.
Liu Y, Chen L, Zhang N, Li Z, Zhang G, Xu Y, Shen Q, Zhang R. 2016. Plant–microbe communication enhances auxin biosynthesis by a root-associated bacterium, Bacillus amyloliquefaciens SQR9. Molecular Plant–Microbe Interactions, 29, 324–330.
Liu Y, Teng K, Wang T, Dong E, Zhang M, Tao Y, Zhong J. 2020. Antimicrobial Bacillus velezensis HC6: Production of three kinds of lipopeptides and biocontrol potential in maize. Journal of Applied Microbiology, 128, 242–254.
Lu Y, Abraham W R, Conrad R. 2007. Spatial variation of active microbiota in the rice rhizosphere revealed by in situ stable isotope probing of phospholipid fatty acids. Environmental Microbiology, 9, 474–481.
Lu Y, Murase J, Watanabe A, Sugimoto A, Kimura M. 2004. Linking microbial community dynamics to rhizosphere carbon flow in a wetland rice soil. FEMS Microbiology Ecology, 48, 179–186.
Lu Y, Rosencrantz D, Liesack W, Conrad R. 2006. Structure and activity of bacterial community inhabiting rice roots and the rhizosphere. Environmental Microbiology, 8, 1351–1360.
Mahmud K, Makaju S, Ibrahim R, Missaoui A. 2020. Current progress in nitrogen fixing plants and microbiome research. Plants, 9, 97.
Marchaim D, Perez F, Lee J, Bheemreddy S, Hujer A M, Rudin S, Hayakawa K, Lephart P R, Blunden C, Shango M, Campbell M L, Varkey J, Manickam P, Patel D, Pogue J M, Chopra T, Martin E T, Dhar S, Bonomo R A, Kaye K S. 2012. “Swimming in resistance”: Co-colonization with carbapenem-resistant Enterobacteriaceae and Acinetobacter baumannii or Pseudomonas aeruginosa. American Journal of Infection Control, 40, 830–835.
Mejri S, Siah A, Coutte F, Magnin-Robert M, Randoux B, Tisserant B, Krier F, Jacques P, Reignault P, Halama P. 2018. Biocontrol of the wheat pathogen Zymoseptoria tritici using cyclic lipopeptides from Bacillus subtilis. Environmental Science and Pollution Research, 25, 29822–29833.
Mendes R, Kruijt M, de Bruijn I, Dekkers E, van der Voort M, Schneider J H, Piceno Y M, DeSantis T Z, Andersen G L, Bakker P A. 2011. Deciphering the rhizosphere microbiome for disease-suppressive bacteria. Science, 332, 1097–1100.
Mercier J, Lindow S. 2000. Role of leaf surface sugars in colonization of plants by bacterial epiphytes. Applied and Environmental Microbiology, 66, 369–374.
Minden V, Deloy A, Volkert A M, Leonhardt S D, Pufal G. 2017. Antibiotics impact plant traits, even at small concentrations. AOB Plants, 9, 1–19.
Molina-Santiago C, Pearson J R, Navarro Y, Berlanga-Clavero M V, Caraballo-Rodriguez A M, Petras D, García-Martín M L, Lamon G, Haberstein B, Cazorla F M. 2019. The extracellular matrix protects Bacillus subtilis colonies from Pseudomonas invasion and modulates plant co-colonization. Nature Communications, 10, 1–15.
Morffy N, Strader L C. 2020. Old town roads: Routes of auxin biosynthesis across kingdoms. Current Opinion in Plant Biology, 55, 21–27.
Morris A, Meyer K, Bohannan B. 2020. Linking microbial communities to ecosystem functions: What we can learn from genotype–phenotype mapping in organisms. Philosophical Transactions of the Royal Society, 375, 20190244.
Müller M. 2021. Foes or friends: ABA and ethylene interaction under abiotic stress. Plants, 10, 448.
Nascimento F X, Vicente C S, Barbosa P, Espada M, Glick B R, Mota M, Oliveira S. 2013. Evidence for the involvement of acc deaminase from Pseudomonas putida UW4 in the biocontrol of pine wilt disease caused by Bursaphelenchus xylophilus. BioControl, 58, 427–433.
Naseem M, Kunz M, Dandekar T. 2017. Plant–pathogen maneuvering over apoplastic sugars. Trends in Plant Science, 22, 740–743.
Newman M A, Sundelin T, Nielsen J T, Erbs G. 2013. MAMP (microbe-associated molecular pattern) triggered immunity in plants. Frontiers in Plant Science, 4, 139.
Nguyen Q-M, Iswanto A B B, Son G H, Kim S H. 2021. Recent advances in effector-triggered immunity in plants: New pieces in the puzzle create a different paradigm. International Journal of Molecular Sciences, 22, 4709.
Nimchuk Z, Eulgem T, Holt Iii B F, Dangl J L. 2003. Recognition and response in the plant immune system. Annual Review of Genetics, 37, 579–609.
Nuccio E E, Starr E, Karaoz U, Brodie E L, Zhou J, Tringe S G, Malmstrom R R, Woyke T, Banfield J F, Firestone M K, Pett-Ridge J. 2020. Niche differentiation is spatially and temporally regulated in the rhizosphere. The ISME Journal, 14, 999–1014.
Ojuederie O B, Olanrewaju O S, Babalola O O. 2019. Plant growth promoting rhizobacterial mitigation of drought stress in crop plants: Implications for sustainable agriculture. Agronomy, 9, 712.
Olanrewaju O S. 2016. Isolation of Bacterial Strains for Improved Maize Production. North-West University, South Africa.
Olanrewaju O S, Ayangbenro A S, Glick B R, Babalola O O. 2018. Plant health: Feedback effect of root exudates-rhizobiome interactions. Applied Microbiology and Biotechnology, 103, 1155–1166.
Olanrewaju O S, Babalola O O. 2019a. Bacterial consortium for improved maize (Zea mays L.) production. Microorganisms, 7, 519.
Olanrewaju O S, Babalola O O. 2019b. Streptomyces: Implications and interactions in plant growth promotion. Applied Microbiology and Biotechnology, 103, 1179–1188.
Olanrewaju O S, Glick B R, Babalola O O. 2017. Mechanisms of action of plant growth promoting bacteria. World Journal of Microbiology and Biotechnology, 33, 197.
Olorunleke F E, Kieu N P, De Waele E, Timmerman M, Ongena M, Höfte M. 2017. Coregulation of the cyclic lipopeptides orfamide and sessilin in the biocontrol strain Pseudomonas sp. Cmr 12a. Microbiologyopen, 6, e00499.
Ortiz N, Armada E, Duque E, Roldán A, Azcón R. 2015. Contribution of arbuscular mycorrhizal fungi and/or bacteria to enhancing plant drought tolerance under natural soil conditions: Effectiveness of autochthonous or allochthonous strains. Journal of Plant Physiology, 174, 87–96.
Osugi A, Sakakibara H. 2015. How do plants respond to cytokinins and what is their importance? BMC Biology, 13, 1–10.
Pal K K, Gardener B M. 2006. Biological control of plant pathogens. The Plant Health Instructor, 2, 1117–1142.
Paramanandham P, Rajkumari J, Pattnaik S, Busi S. 2017. Biocontrol potential against Fusarium oxysporum f. sp. Lycopersici and Alternaria solani and tomato plant growth due to plant growth-promoting rhizobacteria. International Journal of Vegetable Science, 23, 294–303.
Peiffer J A, Spor A, Koren O, Jin Z, Tringe S G, Dangl J L, Buckler E S, Ley R E. 2013. Diversity and heritability of the maize rhizosphere microbiome under field conditions. Proceedings of the National Academy of Sciences of the United States of America, 110, 6548–6553.
Peng H, Borg R E, Dow L P, Pruitt B L, Chen I A. 2020. Controlled phage therapy by photothermal ablation of specific bacterial species using gold nanorods targeted by chimeric phages. Proceedings of the National Academy of Sciences of the United States of America, 117, 1951–1961.
Piceno Y M, Lovell C R. 2000. Stability in natural bacterial communities: II. Plant resource allocation effects on rhizosphere diazotroph assemblage composition. Microbial Ecology, 39, 41–48.
Prashanth S, Mathivanan N. 2010. Growth promotion of groundnut by IAA producing rhizobacteria Bacillus licheniformis MML2501. Archives of Phytopathology and Plant Protection, 43, 191–208.
Pratama A A, Terpstra J, de Oliveria A L M, Salles J F. 2020. The role of rhizosphere bacteriophages in plant health. Trends in Microbiology, 28, 709–718.
Rana S, Bhawal S, Kumari A, Kapila S, Kapila R. 2020. pH-dependent inhibition of ahl-mediated quorum sensing by cell-free supernatant of lactic acid bacteria in Pseudomonas aeruginosa PAO1. Microbial Pathogenesis, 142, 104105.
Richardson A E, Barea J M, McNeill A M, Prigent-Combaret C. 2009. Acquisition of phosphorus and nitrogen in the rhizosphere and plant growth promotion by microorganisms. Plant and Soil, 321, 305–339.
Rodrı́guez H, Fraga R. 1999. Phosphate solubilizing bacteria and their role in plant growth promotion. Biotechnology Advances, 17, 319–339.
Rolfe S A, Griffiths J, Ton J. 2019. Crying out for help with root exudates: Adaptive mechanisms by which stressed plants assemble health-promoting soil microbiomes. Current Opinion in Microbiology, 49, 73–82.
Saharan B, Nehra V. 2011. Plant growth promoting rhizobacteria: A critical review. Life Science and Medical Research, 21, 30.
Salguero-Linares J, Coll N S. 2019. Plant proteases in the control of the hypersensitive response. Journal of Experimental Botany, 70, 2087–2095.
Scher F M, Kloepper J W, Singleton C A. 1985. Chemotaxis of fluorescent Pseudomonas spp. to soybean seed exudates in vitro and in soil. Canadian Journal of Microbiology, 31, 570–574.
Schuhegger R, Ihring A, Gantner S, Bahnweg G, Knappe C, Vogg G, Hutzler P, Schmid M, Van Breusegem F, Eberl L. 2006. Induction of systemic resistance in tomato by N-acyl-L-homoserine lactone-producing rhizosphere bacteria. Plant, Cell and Environment, 29, 909–918.
Sharma R S, Nayak S, Malhotra S, Karmakar S, Sharma M, Raiping S, Mishra V. 2019. Rhizosphere provides a new paradigm on the prevalence of lysogeny in the environment. Soil and Tillage Research, 195, 104368.
Shilev S, Babrikova I, Babrikov T. 2020. Consortium of plant growth-promoting bacteria improves spinach (Spinacea oleracea L.) growth under heavy metal stress conditions. Journal of Chemical Technology and Biotechnology, 95, 932–939.
da Silva E C, Nogueira R, da Silva M A, de Albuquerque M B. 2011. Drought stress and plant nutrition. Plant Stress, 5, 32–41.
Simonin M, Dasilva C, Terzi V, Ngonkeu E L M, Diouf D, Kane A, Béna G, Moulin L. 2020. Influence of plant genotype and soil on the wheat rhizosphere microbiome: Evidences for a core microbiome across eight African and European soils. FEMS Microbiology Ecology, 96, fiaa067.
Srivastava S, Singh N. 2014. Mitigation approach of arsenic toxicity in chickpea grown in arsenic amended soil with arsenic tolerant plant growth promoting Acinetobacter sp. Ecological Engineering, 70, 146–153.
Suttle C A. 2007. Marine viruses - major players in the global ecosystem. Nature Reviews Microbiology, 5, 801–812.
Swamy M K, Akhtar M S, Sinniah U R. 2016. Root exudates and their molecular interactions with rhizospheric microbes. In: Hakeem K, Akhtar M, eds., Plant, Soil and Microbes. Springer, Cham. pp. 59–77.
Teklić T, Parađiković N, Špoljarević M, Zeljković S, Lončarić Z, Lisjak M. 2021. Linking abiotic stress, plant metabolites, biostimulants and functional food. Annals of Applied Biology, 178, 169–191.
Tiwari S, Vaish B, Singh P. 2016. Population and global food security: Issues related to climate change. In: Environmental Issues Surrounding Human Overpopulation. IGI Global, Hershey, USA. pp. 40–63.
Turan M, Kıtır N, Alkaya Ü, Günes A, Tüfenkçi Ş, Yıldırım E, Nikerel E. 2016. Making soil more accessible to plants: The case of plant growth promoting rhizobacteria. InTech Open, 5, 61–69.
Turner T R, Ramakrishnan K, Walshaw J, Heavens D, Alston M, Swarbreck D, Osbourn A, Grant A, Poole P S. 2013. Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants. The ISME Journal, 7, 2248–2258.
Valetti L, Iriarte L, Fabra A. 2018. Growth promotion of rapeseed (Brassica napus) associated with the inoculation of phosphate solubilizing bacteria. Applied Soil Ecology, 132, 1–10.
Vandeputte O M, Kiendrebeogo M, Rajaonson S, Diallo B, Mol A, El Jaziri M, Baucher M. 2010. Identification of catechin as one of the flavonoids from Combretum albiflorum bark extract that reduces the production of quorum-sensing-controlled virulence factors in Pseudomonas aeruginosa PAO1. Applied and Environmental Microbiology, 76, 243–253.
Vardharajula S, Zulfikar Ali S, Grover M, Reddy G, Bandi V. 2011. Drought-tolerant plant growth promoting Bacillus spp.: Effect on growth, osmolytes, and antioxidant status of maize under drought stress. Journal of Plant Interactions, 6, 1–14.
Verma S K, Sahu P K, Kumar K, Pal G, Gond S K, Kharwar R N, White J F. 2021. Endophyte roles in nutrient acquisition, root system architecture development and oxidative stress tolerance. Journal of Applied Microbiology, 131, 2161–2177.
Wahyudi A T, Astuti R P, Widyawati A, Mery A, Nawangsih A A. 2011. Characterization of Bacillus sp. strains isolated from rhizosphere of soybean plants for their use as potential plant growth for promoting rhizobacteria. Journal of Microbiology and Antimicrobials, 3, 34–40.
Wan W L, Fröhlich K, Pruitt R N, Nürnberger T, Zhang L. 2019. Plant cell surface immune receptor complex signaling. Current Opinion in Plant Biology, 50, 18–28.
Wang C J, Yang W, Wang C, Gu C, Niu D D, Liu H X, Wang Y P, Guo J H. 2012. Induction of drought tolerance in cucumber plants by a consortium of three plant growth-promoting rhizobacterium strains. PLoS ONE, 7, e52565.
Wonglom P, Suwannarach N, Lumyong S, Ito S I, Matsui K, Sunpapao A. 2019. Streptomyces angustmyceticus NR8-2 as a potential microorganism for the biological control of leaf spots of Brassica rapa subsp. pekinensis caused by Colletotrichum sp. and Curvularia lunata. Biological Control, 138, 104046.
Worst E G, Exner M P, De Simone A, Schenkelberger M, Noireaux V, Budisa N, Ott A. 2015. Cell-free expression with the toxic amino acid canavanine. Bioorganic and Medicinal Chemistry Letters, 25, 3658–3660.
Xiong W, Song Y, Yang K, Gu Y, Wei Z, Kowalchuk G A, Xu Y, Jousset A, Shen Q, Geisen S. 2020. Rhizosphere protists are key determinants of plant health. Microbiome, 8, 27.
Xu J, Kloepper J W, Huang P, McInroy J A, Hu C H. 2018a. Isolation and characterization of N2-fixing bacteria from giant reed and switchgrass for plant growth promotion and nutrient uptake. Journal of Basic Microbiology, 58, 459–471.
Xu J, Zhang Y, Zhang P, Trivedi P, Riera N, Wang Y, Liu X, Fan G, Tang J, Coletta-Filho H D, Cubero J, Deng X, Ancona V, Lu Z, Zhong B, Roper M C, Capote N, Catara V, Pietersen G, Vernière C, et al. 2018b. The structure and function of the global Citrus rhizosphere microbiome. Nature Communications, 9, 4894.
Xu Q, Tang C, Wang L, Zhao C, Kang Z, Wang X. 2020. Haustoria - arsenals during the interaction between wheat and Puccinia striiformis f. sp. tritici. Molecular Plant Pathology, 21, 83–94.
Yuan Y, Gao M. 2017. Jumbo bacteriophages: An overview. Frontiers in Microbiology, 8, 1–9.
Zaidi A, Khan M, Ahemad M, Oves M. 2009. Plant growth promotion by phosphate solubilizing bacteria. Acta Microbiologica et Immunologica Hungarica, 56, 263–284.
Zhao Y J, Li J H, Wang Z F, Yan C, Wang S B, Zhang J B. 2012. Influence of the plant development on microbial diversity of vertical-flow constructed wetlands. Biochemical Systematics and Ecology, 44, 4–12.
Zhu Z, Zhang H, Leng J, Niu H, Chen X, Liu D, Chen Y, Gao N, Ying H. 2020. Isolation and characterization of plant growth-promoting rhizobacteria and their effects on the growth of Medicago sativa L. under salinity conditions. Antonie van Leeuwenhoek, 113, 1263–1278.
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