中国农业科学 ›› 2011, Vol. 44 ›› Issue (6): 1092-1099 .

• 作物遗传育种·种质资源·分子遗传学 • 上一篇    下一篇

枯萎病菌诱导香蕉根的均一化全长cDNA文库构建及防御基因的表达模式分析

  

  1. (安徽农业大学生命科学学院)

  • 收稿日期:2010-07-19 修回日期:2010-11-07 出版日期:2011-03-15 发布日期:2011-03-15
  • 通讯作者: 谢江辉

Construction of a Normalized Full-Length cDNA Library of Banana Roots and Expression Patterns of Defense Genes

  1. (安徽农业大学生命科学学院)

  • Received:2010-07-19 Revised:2010-11-07 Online:2011-03-15 Published:2011-03-15
  • Contact: XIE Jiang-hui

摘要:

【目的】研究防御基因表达模式,筛选抗枯萎病候选基因,进一步阐明抗病机制。【方法】以4号枯萎病生理小种诱导的‘农科1号’香蕉为试材,利用DSN(duplex-specific nuclease)均一化酶结合SMART(switching mechanism at 5′end of the RNA transcript)技术构建香蕉根的均一化全长cDNA文库;并用多重半定量RT-PCR技术研究防御基因的表达模式。【结果】经检测,文库滴度为3.1×106 cfu•mL-1,扩增后库容为2.8×108 cfu•mL-1。随机挑选580个克隆进行测序,去除低质量序列后获得421个unigenes,片段分布在750—3 000 bp,文库重组率为100%,其中,未知功能基因占42%,全长cDNA序列为68%。文库筛选获得7个防御基因,进行不同时间的诱导表达分析,发现苯丙氨酸解氨酶(PAL)、过氧化氢酶(CAT)、β-1,3-葡聚糖酶(PR-2)和胶质乙酰酯酶(PAE)具有较低的本底表达水平;枯萎病菌浸染后,7个防御酶基因表达量增加,过氧化物酶(POX)、几丁质酶(PR-3)、PAE和PAL在第6天达到高峰;虽然7个防御基因在对照植株中的表达模式与诱导后的植株类似,但表达量均显著低于接菌后。【结论】所构建的均一化全长cDNA文库,片段重组性和完整性均达到分离筛选目的基因高质量文库的要求,且证明了7个防御基因不同程度地参与了抗枯萎病反应。

关键词: 香蕉, 枯萎病, cDNA文库, 防御基因, 表达

Abstract:

【Objective】The research purpose is to figure out the expression patterns of defense genes, screen candidate genes related to resistance to Fusarium wilt, and further clarify the resistance mechanism. 【Method】A normalized cDNA enriched in full-length sequences was constructed from roots of banana cultivar Nongke No. 1 inoculated with FOC race 4 using DSN (duplex-specific nuclease) normalization method combined with SMART (switching mechanism at 5′ end of the RNA transcript) technique. Furthermore, the expressions of defense genes were considered with multiplex semi-quantitative PCR. 【Result】The liter of original cDNA library was 3.1×106 cfu•mL-1, and amplified library was 2.8×108 cfu•mL-1. Then, 421 unigenes containing 42% unknown genes from the sequenced results of 580 clones selected randomly were obtained after the removal of low-quality sequences. The average size of cDNA inserts ranged from 750 to 3 000 bp with a recombination rate of 100%. The rate of full-length gene was 68%. Some protein genes associated with defense were obtained on the basis of cDNA library. By RT-PCR analysis, the expression levels of phenylalanine ammonialyase (PAL), catalase (CAT), β-1,3-glucanase (PR-2) and pectin acetylesterase (PAE) in non-inoculated condition were very low. However, seven defense genes were obviously increased after inoculated by FOC race 4, and peroxidase (POX), endochitinase (PR-3), PAE and PAL reached the peak in the sixth day. Though the expression patterns of seven defense genes were similar with the controls, the intensities were much less than the inoculations. 【Conclusion】 These results indicated that the normalized full-length cDNA library was established successfully, which can be used for isolating required gene in the light of the rate of recombinant and integrity. Meanwhile, seven defense genes were identified, which played a key role in resistance to Fusarium wilt in some extent.

Key words: banana, Fusarium wilt, cDNA library, defense genes, expression