Exploring novel high molecular weight glutenin subunits (HMW-GSs) from wild related species is a strategy to improve wheat processing quality.  The objective of the present investigation was to identify the chromosomes of the wheat-alien introgression line N124, derived from the hybridization between Triticum aestivum with Aegilops kotschyi, and characterize the effects on quality-related traits.  Fluorescence in situ hybridization karyotypes showed that N124 is a disomic 1U^k(1A) substitution line.  Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and reversed-phase high-performance liquid chromatography verified N124 expressed two HMW-GSs of the Ae. kotschyi parent.  PacBio RNA sequencing and phylogenetic analysis confirmed that the two HMW-GSs were U^kx and U^ky.  Compared to the wheat parent, the substitution line had no obvious agronomic defects except fewer grains per spike but improved several major quality parameters.  It can be served as a donor or bridge material for wheat quality improvement.

The serine proteases of Mycobacteria tuberculosis (Mtb) are important contributors to the process of bacterial invasion and its pathogenesis.  In the present study, we systematically characterized the role of the Rv1043c protein in Mycobacterium infection by purifying the Rv1043c protein in Escherichia coli and constructing a Mycobacterium smegmatis (Msg) strain overexpressing Rv1043c (Msg_Rv1043c).  We found that Rv1043c had serine protease activity and localized to the surface of Mtb.  We determined that the optimal pH and temperature for the Rv1043c serine protease were 9.0 and 45°C, respectively.  Moreover, the serine protease activity of Rv1043c was enhanced by divalent metal ions of Ca²⁺ and Mg²⁺.  Site-directed mutagenesis studies demonstrated that the serine 279 residue in Rv1043c plays a catalytic role.  Additionally, mouse model studies confirmed that Rv1043c significantly enhanced the survival of Msg in vivo, induced pulmonary injury and lung cell apoptosis, and promoted the release of pro-inflammatory cytokines interleukin-1β and interleukin-6 in mice.  This study presents novel insights into the relationship between mycobacterial serine protease and the pathogenesis of the disease.

Inappropriate tillage practices and nitrogen (N) management have become seriously limitations for maize (Zea mays L.) yield and N use efficiency (NUE) in the North China Plain (NCP).  In the current study, we examined the effects of strip deep rotary tillage (ST) combined with controlled-release (CR) urea on maize yield and NUE, and determined the physiological factors involved in yield formation and N accumulation during a 2-year field experiment.  Compared with conventional rotary tillage (RT) and no-tillage (NT), ST increased the soil water content and soil mineral N content (N_min) in the 20–40 cm soil layer due to reduction by 10.5 and 13.7% in the soil bulk density in the 0–40 cm soil layer, respectively.  Compared with the values obtained by common urea (CU) fertilization, CR increased the N_min in the 0–40 cm soil layers by 12.4 and 10.3% at the silking and maturity stages, respectively.  As a result, root length and total N accumulation were enhanced under ST and CR urea, which promoted greater leaf area and dry matter (particularly at post-silking), eventually increasing the 1 000-kernel weight of maize.  Thus, ST increased the maize yield by 8.3 and 11.0% compared with RT and NT, respectively, whereas CR urea increased maize yield by 8.9% above the values obtained under CU.  Because of greater grain yield and N accumulation, ST combined with CR urea improved the NUE substantially.  These results show that ST coupled with CR urea is an effective practice to further increase maize yield and NUE by improving soil properties and N supply, so it should be considered for sustainable maize production in the NCP (and other similar areas worldwide).

MicroRNAs (miRNAs) are small (ca. 20–24 nucleotides) non-coding RNAs that have recently been recognized as key post-transcriptional modulators of gene expression; and they are involved in many biological processes in plants, such as root growth and development.  The miRNAs regulate root elongation, lateral root (LR) formation and adventitious root (AR) development in response to hormone signaling, nutrient uptake and biotic/abiotic stress.  This review provides multiple perspectives on the involvement of miRNAs in regulating root growth and development in plants.  We also discuss several crucial mechanisms of miRNAs, their relationships with transcription factors and the target gene-mediated hormone signaling interactions in the regulation of root growth and development.

Yield gap analysis could provide management suggestions to increase crop yields, while the understandings of resource utilization efficiency could help judge the rationality of the management. Based on more than 110 published papers and data from Food and Agriculture Organization (FAO, www.fao.org/faostat) and the Global Yield Gap and Water Productivity Atlas (www.yieldgap.org), this study summarized the concept, quantitative method of yield gap, yield-limiting factors, and resource utilization efficiency of the three major food crops (wheat, maize and rice). Currently, global potential yields of wheat, maize and rice were 7.7, 10.4 and 8.5 t ha^–1, respectively. However, actual yields of wheat, maize and rice were just 4.1, 5.5 and 4.0 t ha^–1, respectively. Climate, nutrients, moisture, crop varieties, planting dates, and socioeconomic conditions are the most mentioned yield-limiting factors. In terms of resource utilization, nitrogen utilization, water utilization, and radiation utilization efficiencies are still not optimal, and this review has summarized the main improvement measures. The current research focuses on quantitative potential yield and yield gap, with a rough explanation of yield-limiting factors. Subsequent research should use remote sensing data to improve the accuracy of the regional scale and use machine learning to quantify the role of yield-limiting factors in yield gaps and the impact of change crop management on resource utilization efficiency, so as to propose reasonable and effective measures to close yield gaps.

Heat stress seriously affects wheat production in many regions of the world.  At present, heat tolerance research remains one of the least understood fields in wheat genetics and breeding and there is a lack of effective methods to quantify heat stress and heat tolerance in different wheat cultivars.  The objective of this study was to use various wheat cultivars to evaluate stress intensity (δ) and a new method for quantification of heat tolerance and compare this technique with three other currently utilized methods.  This new parameter for heat tolerance quantification is referred to as the heat tolerance index (HTI) and is an indicator of both yield potential and yield stability.  Heat treatments were applied in a controlled setting when anthesis had been reached for 80% of the wheat.  The stress intensity evaluation indicated heat shock was the main factor associated with kernel weight reduction while grain yield reduction was mainly associated with chronic high temperature.  The methods evaluation showed that a temperature difference of 5°C from natural temperatures was a suitable heat treatment to compare to the untreated controls.  HTI was positively correlated with yield under heat stress (r=0.8657, δ₂₀₁₀=0.15, in 2009–2010; r=0.8418, δ₂₀₁₁=0.20, in 2010–2011; P<0.01), and negatively correlated with yield reduction rate (r=–0.8344, in 2009–2010; r=–0.7158, in 2010–2011; P<0.01).  The results of this study validated the use of HTI and temperature difference control for quantifying wheat heat tolerance that included the yield potential and the stability of different wheat cultivars under heat stress.  Additionally, 10 wheat cultivars showed high HTI and should be further tested for their heat confirming characteristics for use in wheat heat tolerance breeding.

Three main phytotoxic compounds including lunatoic acid A (1), 5Z-7-oxozeaenol (2) and zeaenol (3) were isolated from the fermentation broth of Cladosporium oxysporum DH14, a fungus residing in the locust (Oxya chinensis ) gut.  Two additional derivative compounds, compound 1a and 1b, were synthesized by methylation and chlorination of compound 1, respectively.  The structures of such compounds were identified on the basis of spectroscopic analysis and by comparison of the corresponding data to those previously reported in the literature.  Compounds 1–3 exhibited significantly phytotoxic activities against the radicle growth of Amaranthus retroflexus L. with the 50% inhibitory concentrations (IC₅₀ values) of 4.51, 4.80 and 8.16 μg mL^–1, respectively, which is comparable to that positive control 2,4-dichlorophenoxyacetic acid (IC₅₀=1.95 μg mL^–1).  Furthermore, the compound 1 showed selective phytotoxic activity with the inhibition rate of less than 22% against the crops of Brassica rapa L., Sorghum durra, Brassica campestris L., Capsicum annucm and Raphanus sativus L. under the concentration of 100 μg mL^–1.  Both derivatives of compound 1 had moderate phytotoxic activity against the radicle growth of A. retroflexus L.  The findings of our present study suggest that these compounds provide new promising candidates for the potential management strategies of weeds.

    Cytoplasmic effects are important agronomical phenomena that have generated widespread interest in both theory and application. In the present study, five high yield rice cultivars (Oryza sativa L. ssp. japonica) in large-scale cultivation in northeast China were determined to possess Oryza sativa L. ssp. indica-type cytoplasm using cytoplasmic subspecies-specific molecular markers. This was confirmed by cytoplasmic genome-wide single nucleotide polymorphisms (SNPs) and functional gene sequencing. Two of these five japonica cultivars were core breeding parents with high yield and the other three were super-high-yield varieties registered by the Ministry of Agriculture of China. We constructed nuclear substitution lines to further demonstrate whether and how this indica-type cytoplasm contributed to yield improvement by comparing yield components. The results showed that under the same japonica nuclear background, the lines with indica-type cytoplasm had a significant decrease in tillers in exchange for increased grain number per panicle compared with their recurrent parents. Our results implied that botanical basis of this cytoplasmic effect was to reduce the plant’s branching differentiation to produce more floral organs under the constant nutrition. Our findings open another door for the utilization of inter-subspecific hybridization for the improvement of rice cultivar.

The grain yield of maize has increased continuously in past decades, largely through hybrid innovation, cultivation technology, and in particular, recent genetic improvements in photosynthesis. Elite inbred lines are crucial for innovating new germplasm. Here, we analyzed variations in grain yield and a series of eco-physiological photosynthetic traits after anthesis in sixteen parental lines of maize (Zea mays L.) released during three different eras (1960s, 1980s, 2000s). We found that grain yield and biomass significantly increased in the 2000s than those in the 1980s and 1960s. Leaf area, chlorophyll, and soluble protein content slowly decreased, and maintained a higher net photosynthesis rate (Pn) and improved stomatal conductance (Gs) after anthesis in the 2000s. In addition, the parental lines in the 2000s obtained higher actual photochemistry efficiency (ФPSII) and the maximum PSII photochemistry efficiency (Fv/Fm), which largely improved light partitioning and chlorophyll fluorescence characteristic, including higher photochemical and photosystem II (PSII) reaction center activity, lower thermal energy dissipation in antenna proteins. Meanwhile, more lamellae per granum within chloroplasts were observed in the parental lines of the 2000s, with a clear and complete chloroplast membrane, which will greatly help to improve photosynthetic capacity and energy efficiency of ear leaf in maize parental lines. It is concluded that grain yield increase in modern maize parental lines is mainly attributed to the improved chloroplast structure and more light energy catched for the photochemical reaction, thus having a better stay-green characteristic and stronger photosynthetic capacity after anthesis. Our direct physiological evaluation of these inbred lines provides important information for the further development of promising maize cultivars.

Phosphorus (P) is an essential element for plant growth and yield. Improving phosphorus use efficiency of crops could potentially reduce the application of chemical fertilizer and alleviate environmental damage. Soybean (Glycine max (L.) Merr.) is sensitive to phosphorus (P) in the whole life history. Soybean cultivars with different P efficiencies were used to study P uptake and dry matter accumulation under different P levels. Under low P conditions, the P contents of leaf in high P efficiency cultivars were greater than those in low P efficiency cultivars at the branching stage. The P accumulation in stems of high P efficiency cultivars and in leaves of low P efficiency cultivars increased with increasing P concentration at the branching stage. At the late podding stage, the P accumulation of seeds in high and low P efficiency cultivars were 22.5 and 26.0%, respectively; and at the mature stage were 69.8 and 74.2%, respectively. In average, the P accumulation in whole plants and each organ was improved by 24.4% in high P efficiency cultivars compared to low P efficiency cultivars. The biomass between high and low P efficiency cultivars were the same under extended P condition, while a significant difference was observed at late pod filling stage. At the pod setting stage, the biomass of high P efficiency cultivars were significant greater (17.4%) than those of low P efficiency cultivars under high P condition. Meanwhile, under optimum growth conditions, there was little difference of biomass between the two types of cultivars, however, the P agronomic efficiency and P harvest index were significant higher in high P efficiency cultivars than those in low P efficiency cultivars.

Super high-yielding soybean cultivar Liaodou 14, soybean cultivars from Ohio in the United States, and the common soybean cultivars from Liaoning Province, China, with similar geographic latitudes and identical pod-bearing habits were used as the study materials for a comparison of morphological traits and production characteristics to provide a theoretical basis for the breeding of improved super high-yielding soybean cultivars. Using a randomized block design, different soybean cultivars from the same latitude were compared under conventional and unconventional treatments for their production characteristics, including morphological traits, leaf area index (LAI), net photosynthesis rate, and dry matter accumulation. The specific characteristics of the super high-yielding soybean cultivar Liaodou 14 were analyzed. The results showed that the plant height of Liaodou 14 was significantly lower than that of the common cultivars from Liaoning, whereas the number of its main-stem nodes was higher than that of the cultivars from Ohio or Liaoning. A high pod density was observed in Liaodou 14 under conventional treatments. Under both conventional and unconventional treatments, the branch number of Liaodou 14 was markedly higher than that of the common cultivars from Liaoning, and its branch length and leaf inclination angle were significantly higher than those of common cultivars from Liaoning or Ohio. Only small changes in the leaf inclination angle were observed in Liaodou 14 treated with conventional or unconventional methods. Under each treatment, Liaodou 14 exhibited the lowest amplitude of reduction in SPAD values and net photosynthesis rates from the grain-filling to ripening stages; the cultivars from Ohio and the common cultivars from Liaoning exhibited more significant reductions. Liaodou 14 reached its peak LAI later than the other cultivars but maintained its LAI at a higher level for a longer duration. Under both conventional and unconventional treatments, Liaodou 14 produced a higher yield than the other two cultivars, with significant differences from the Ohio cultivars. In summary, super high-yielding soybean cultivars have several main features: suitable plant height, high pod density, good leaf structure with strong functionality, and slow leaf senescence at the late reproductive stage, which is conducive to the accumulation of dry matter and improved yield.

With the rapid increment of the information on the web, traditional information retrieval based on the keywords is far from user’s satisfaction in recall and precision. In order to improve the recall ratio and the precision radio of IR engine in the vegetables e-commerce, an information retrieval model based on the vegetables e-commerce ontology is presented in this paper, vegetables e-commerce ontology was constructed by gathering and the analyzing vegetables e-commerce domain information on the web. The vegetables e-commerce ontology is composed of some kinds of vegetable classes and hierarchy relationship of vegetables classes. In the process of information retrieval, domain ontology helps to index information and information inference. An ontology-based information retrieval model is implemented, and which has more functions than the keyword-based web information retrieval engines. The experiment results show that the recall ratio and the precision ratio of ontology-based information retrieval model are higher than that of the information retrieval engine based on keyword at a certain extent.