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Unintended Changes in Genetically Modified Rice Expressing the Lysine-Rich Fusion Protein Gene Revealed by a Proteomics Approach |
ZHAO Xiang-xiang, TANG Tang, LIU Fu-xia, LU Chang-li, HU Xiao-lan, JI Li-lian , LIU Qiaoquan |
1.Jiangsu Key Laboratory for Eco-Agricultural Biotechnology Around Hongze Lake, Huaiyin Normal University, Huaian 223300, P.R.China
2.Key Laboratories of Crop Genetics and Physiology of the Jiangsu Province and Plant Functional Genomics, Ministry of Education/Yangzhou University, Yangzhou 225009, P.R.China |
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摘要 Development of new technologies for evaluating genetically modified (GM) crops has revealed that there are unintended insertions and expression changes in GM crops. Profiling techniques are non-targeted approaches and are capable of detecting more unintended changes in GM crops. Here, we report the application of a comparative proteomic approach to investigate the protein profile differences between a GM rice line, which has a lysine-rich protein gene, and its non-transgenic parental line. Proteome analysis by two-dimensional gel electrophoresis (2-DE) and mass spectrum analysis of the seeds identified 22 differentially expressed protein spots. Apart from a number of glutelins that were detected as targeted proteins in the GM line, the majority of the other changed proteins were involved in carbohydrate metabolism, protein synthesis and stress responses. These results indicated that the altered proteins were not associated with plant allergens or toxicity.
Abstract Development of new technologies for evaluating genetically modified (GM) crops has revealed that there are unintended insertions and expression changes in GM crops. Profiling techniques are non-targeted approaches and are capable of detecting more unintended changes in GM crops. Here, we report the application of a comparative proteomic approach to investigate the protein profile differences between a GM rice line, which has a lysine-rich protein gene, and its non-transgenic parental line. Proteome analysis by two-dimensional gel electrophoresis (2-DE) and mass spectrum analysis of the seeds identified 22 differentially expressed protein spots. Apart from a number of glutelins that were detected as targeted proteins in the GM line, the majority of the other changed proteins were involved in carbohydrate metabolism, protein synthesis and stress responses. These results indicated that the altered proteins were not associated with plant allergens or toxicity.
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Received: 14 June 2013
Accepted:
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Fund: This research was supported by the National Major Special Project for the Development of Transgenic Organisms, China (2009ZX-08011-003B), the Jiangsu Province Qing Lan Project for Young and Middle-Aged Academic Leaders, China and the Jiangsu Province Qing Lan Project for Outstanding Scientific and Technological Innovation Team, China. |
Corresponding Authors:
Correspondence JI Li-lian, Tel/Fax: +86-517-83525885, E-mail: jll2663@sina.com; LIU Qiao-quan, Tel/Fax: +86-514-87996648, E-mail: qqliu@yzu.edu.cn
E-mail: jll2663@sina.com
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About author: ZHAO Xiang-xiang, E-mail: xxzhao2013@163.com |
Cite this article:
ZHAO Xiang-xiang, TANG Tang, LIU Fu-xia, LU Chang-li, HU Xiao-lan, JI Li-lian , LIU Qiaoquan.
2013.
Unintended Changes in Genetically Modified Rice Expressing the Lysine-Rich Fusion Protein Gene Revealed by a Proteomics Approach. Journal of Integrative Agriculture, 12(11): 2013-2021.
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[1]Barros E, Lezar S, Anttonen M J, van Dijk J P, Röhlig RM, Kok E J, Engel K H. 2010. Comparison of two GMmaize varieties with a near-isogenic non-GM varietyusing transcriptomics, proteomics and metabolomics.Plant Biotechnology Journal, 8, 436-451[2]Bradford M M. 1976. A rapid and sensitive method forthe quantitation of microgram quantities of poteinutilizing the principle of protein-dye binding. AnalyticalBiochemistry, 72, 248-254[3]CAC. 2003. Guideline for the Conduct of Food SafetyAssessment of Foods Derived from Recombinant-DNAPlants (CAC/GL45-2003)[4]Cellini F, Chesson A, Colquhoun I, Constable A, Davies HV, Engel K H, Gatehouse A M R, Karenlampi S, KokE J, Leguay J J, et al. 2004. Unintended effects andtheir detection in genetically modified crops. Food andChemical Toxicology, 42, 1089-1125[5]Corpillo D, Gardini G, Vaira A M, Basso M, Aime S,Accotto G R, Fasano M. 2004. Proteomics as a toolto improve investigation of substantial equivalence ingenetically modified organisms: the case of a virusresistanttomato. Proteomics, 4, 193-200[6]Dixon R A, Gang D R, Charlton A J, Fiehn O, Kuiper H A,Reynolds T L, Tjeerdema R S, Jeffery E H, German J B,Ridley W P, et al. 2006. Applications of metabolomicsin agriculture. Journal of Agricultural and FoodChemistry, 54, 8984-8994[7]Dong Y, Shi W D, Zhou X, Zhang Y, Wang Y, Xiao X.2011. A 90-day toxicology study of transgenic riceexpressing lysine-rich protein fusion gene in Sprague-Dawley rats. Scientia Agricultura Sinica, 13, 2768-2776 (in Chinese)[8]Emami K, Morris N J, Cockell S J, Golebiowska G, Shu Q Y,Gatehouse A M R. 2010. Changes in protein expressionprofiles between a low phytic acid rice (Oryza sativaL. ssp. japonica) line and its parental line: a proteomicand bioinformatic approach. Journal of Agricultural andFood Chemistry, 58, 6912-6922[9]FAO. 1993. Rice in Human Nutrition. Food and AgricultureOrganization, Rome.FAO. 2004. The State of Food and Agriculture 2003-2004[10]Agricultural Biotechnology: Meeting the Needs of thePoor? Food and Agriculture Organization of the UnitedNations, Rome, Italy.FAO/WHO. 2000. Safety Aspects of Genetically ModifiedFoods of Plant Origin. Report of a Joint FAO/WHO Expert Consultation on Foods Derived fromBiotechnology. Geneva, Switzerland.[11]Filipecki M, Malepszy S. 2006. Unintended consequencesof plant transformation: a molecular insight. Journal ofApplied Genetics, 47, 277-286[12]Fumiyuki G, Toshihiro Y, Naoki S. 1999. Iron fortificationof rice seed by the soybean ferritin gene. NatureBiotechnology, 17, 282-286[13]Gong C Y, Li Q, Yu H T, Wang Z, Wang T. 2012.Proteomics insight into the biological safety of transgenicmodification of rice as compared with conventionalgenetic breeding and spontaneous genotypic variation.Journal of Proteome Research, 11, 3019-3029[14]Griffiths A J F, Wessler S R, Lewontin R C, Gelbart W M,Suzuki D T, Miller J H. 2005. Introduction to GeneticAnalysis. 8th ed. W.H. Freeman Publishers, New York.GB/NY1101-2006[15]2006. Guideline for Safety Assessmentof Food from Genetically Modified Plant and DerivedProducts, Ministry of Agriculture of China. (in Chinese)König A, Cockburn A, Crevel R W R, Debruyne E,Grafstroem R, Hammerling U, Kimber I, KnudsenI, Kuiper H A, Peijnenburg A A C M, et al. 2004.Assessment of the safety of food derived fromgenetically modified (GM) crops. Food and ChemicalToxicology, 42, 1047-1088[16]Kuiper H A, Kleter G A, Noteborn H P, Kok E J. 2001.Assessment of the food safety issues related togenetically modified foods. The Plant Journal, 27, 503- 528.Kuiper H A, Kok E J, Engel K H. 2003. Exploitation ofmolecular profiling techniques for GM food safetyassessment. Current Opinion Biotechnology, 14, 238-243[17]Laemmli U K. 1970. Cleavage of structural proteins duringthe assembly of the head of bacteriophage T4. Nature,227, 680-685[18]Lehesranta S J, Davies H V, Shepherd L V T, Nunan N,McNicol J W, Auriola S, Koistinen K M, Suomalainen S,Kokko H I, Kärenlampi S O. 2005. Comparison of tuberproteomes of potato varieties, landrace, and geneticallymodified lines. Plant Physiology, 138, 1690-1699[19]Liu Q Q. 2002. Genetically engineering rice for increasedlysine. PhD thesis, Yangzhou University, China. (in Chinese)[20]Momma K, Hashimoto W, Ozawa S, Kawai S, Katsube T,Takaiwa F, Kito M, Utsumi S, Murata K. 1999. Qualityand safety evaluation of genetically engineered rice withsoybean glycinin: analyses of the grain composition anddigestibility of glycinin in transgenic rice. BioscienceBiotechnology and Biochemistry, 63, 314-318[21]Mosely B E B. 2002. Safety assessment and public concernfor genetically modified food products: the Europeanview. Toxicologic Pathology, 30, 129-131[22]Natarajan S S, Xu C, Cregan P, Caperna T J, Garrett W M,Luthria D. 2009. Utility of proteomics techniques forassessing protein expression. Regulatory Toxicology andPharmacology, 54, S32-S36.OECD. 1993. Safety Evaluation of Foods Derived byModern Biotechnology: Concepts and Principles.O r g a n i s a t i o n f o r E c o n o m i c C o o p e r a t i o n a n dDevelopment, Paris.[23]Ricroch A E, Bergé J B, Kuntz M. 2011. Evaluation ofgenetically engineered crops using transcriptomic,proteomic, and metabolomic pro?ling techniques. PlantPhysiology, 155, 1752-1761[24]Rischer H, Oksman-Caldentey K M O. 2006. Unintendedeffects in genetically modified crops: revealed bymetabolomics? Trends in Biotechnology, 24, 102-104[25]Ruebelt M C, Leimgruber N K, Lipp M, Reynolds TL, Nemeth M A, Astwood J D, Engel K H, JanyK D. 2006a. Application of two-dimensional gelelectrophoresis to interrogate alterations in the proteomeof gentically modified crops. 1. Assessing analyticalvalidation. Journal of Agricultural and Food Chemistry,54, 2154-2161[26]Ruebelt M C, Lipp M, Reynolds T L, Astwood J D, Engel KH, Jany K D. 2006b. Application of two-dimensional gelelectrophoresis to interrogate alterations in the proteomeof gentically modified crops. 2. Assessing naturalvariability. Journal of Agricultural and Food Chemistry,54, 2162-2168[27]Ruebelt M C, Lipp M, Reynolds T L, Schmuke J J, AstwoodJ D, DellaPenna D, Engel K H, Jany K D. 2006c.Application of two-dimensional gel electrophoresisto interrogate alterations in the proteome of genticallymodified crops. 3. Assessing unintended effects. Journalof Agricultural and Food Chemistry, 54, 2169-2177[28]Sano Y. 1984. Differential regulation of waxy geneexpression in rice endosperm. Theoretical and AppliedGenetics, 68, 467-473[29]Sato H, Suzuki Y, Sakai M, Imbe T. 2002. MolecularCharacterization of Wx-mq, a novel mutant gene for lowamylosecontent in endosperm of rice (Oryza sativa L.).Breeding Science, 52, 131-135[30]Shevchenko A, Wilm M, Vorm O, Mann M. 1996. Massspectrometric sequencing of proteins silver-stainedpolyacrylamide gels. Analytical Chemistry, 68, 850-858[31]Sorochinskii B V, Burlaka O M, Naumenko V D, Sekan AS. 2011. Unintended effects of genetic modifications andmethods of their analysis in plants. Cytology Genetics,45, 324-332[32]Sun S S M, Liu Q Q. 2004. Transgenic approaches toimprove the nutritional quality of plant protein. In vitroCellular & Developmental Biology - Plant, 40, 155-162[33]Sun S S M, Liu Q Q. 2008. Methods to produce desiredproteins in plants. USA patent, US7425667B2.[34]Sun S S M, Xiong L W, Jing Y X, Liu B L. 2001.Lysine rich protein from winged bean. USA patent,US6184437B1.Wang Z Y, Zheng F Q, Shen G Z, Gao J P, Snustad D P, LiM G, Zhang J L, Hong M M. 1995. The amylose contentin rice endosperm is related to the post-transcriptionalregulation of the waxy gene. The Plant Journal, 7, 613-622[35]Yamagata H, Sugimoto T, Tanaka K, Kasai Z. 1982.Biosynthesis of storage proteins in developing rice seeds.Plant Physiology, 70, 1094-1100[36]Ye X D, Al-Babili S, Klöti A, Zhang J, Lucca P, BeyerP, Potrykus I. 2000. Engineering the provitamin A(β-carotene) biosynthetic pathway into (carotenoid-free)rice endosperm. Science, 287, 303-305[37]Yu J, Peng P, Zhang X, Zhao Q, Zhu D, Sun X, Liu J, Ao G.2004. Seed-specific expression of a lysine rich proteinsb401 gene significantly increase both lysine and totalprotein content in maize seeds. Molecular Breeding, 14,1-7[38]Zhou X H, Dong Y, Wang Y, Xiao X, Xu Y, Xu B, Li X,Wei X S, Liu Q Q. 2012. A three generation study withhigh-lysine transgenic rice in Sprague-Dawley rats. Foodand Chemical Toxicology, 50, 1902-1910 |
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