Andresen D, von Nickisch-Rosenegk M, Bier F F. 2009. Helicase-dependent amplification: Use in OnChip amplification and potential for point-of-care diagnostics. Expert Review of Molecular Diagnostics, 9, 645–650.

Bag M K, Basak N, Bagchi T, Masurkar P, Ray A, Adak T, Jena M, Rath P C. 2021. Consequences of Ustilaginoidea virens infection, causal agent of false smut disease of rice, on production and grain quality of rice. Journal of Cereal Science, 100, 103220.

Chen W Y, Yu J, Xu H, Lu X Y, Dai T T, Tian Y E, Shen D Y, Dou D L. 2021. Combining simplified DNA extraction technology and recombinase polymerase amplification assay for rapid and equipment-free detection of citrus pathogen Phytophthora parasitica. Journal of Integrative Agriculture, 20, 2696–2705.

Chen Y, Yao J, Li Y F, Wang W X, Yang X, Zhang A F. 2014. Simple and rapid detection of rice false smut pathogen Ustilaginoidea virens in rice seeds. Phytoparasitica, 42, 371–375.

Chen Z P, Jiao B B, Lin L, Dai T T. 2022a. First report of crown and root rot caused by Fusarium oxysporum on Photinia×fraseri in China. Plant Disease, 106, 3210.

Chen Z P, Jiao B B, Zhou J, He H B, Dai T T. 2022b. Rapid detection of Phytophthora cinnamomi based on a new target gene Pcinn13739. Frontiers in Cellular and Infection Microbiology, 12, 923700.

Clancy E, Coughlan H, Higgins O, Boo T W, Cormican M, Barrett L, Smith T J, Reddington K, Barry T. 2016. Development of internally controlled duplex real-time NASBA diagnostics assays for the detection of microorganisms associated with bacterial meningitis. Journal of Microbiological Methods, 127, 197–202.

Dai T T, Hu T, Yang X, Shen D Y, Jiao B B, Tian W, Xu Y. 2019a. A recombinase polymerase amplificationlateral flow dipstick assay for rapid detection of the quarantine citrus pathogen in China, Phytophthora hibernalis. Peer J, 11, e8083.

Dai T T, Yang X, Hu T, Jiao B B, Xu Y, Zheng X B, Shen D Y. 2019b. Comparative evaluation of a novel recombinase polymerase amplification-lateral flow dipstick (RPA-LFD) assay, LAMP, conventional PCR, and leaf-disc baiting methods for detection of Phytophthora sojae. Frontiers in Microbiology, 10, 1884.

Dai T T, Yang X, Hu T, Li Z Y, Xu Y, Lu C C. 2019c. A novel LAMP assay for the detection of Phytophthora cinnamomi utilizing a new target gene identified from genome sequences. Plant Disease, 103, 3101–3107.

Fan J, Guo X Y, Huang F, Li Y, Liu Y F, Li L, Xu Y J, Zhao J Q, Xiong H, Yu J J, Wang W. 2014. Epiphytic colonization of Ustilaginoidea virens on biotic and abiotic surfaces implies the widespread presence of primary inoculum for rice false smut disease. Plant Pathology, 63, 937–945.

Fan J, Yang J, Wang Y Q, Li G B, Li Y, Huang F, Wang W M. 2016. Current understanding on Villosiclava virens, a unique flower-infecting fungus causing rice false smut disease. Molecular Plant Pathology, 17, 1321–1330.

Fuller S L, Savory E A, Weisberg A J, Buser J Z, Gordon M I, Putnam M L, Chang J H. 2017. Isothermal amplification and lateral-flow assay for detecting crown-gall-causing Agrobacterium spp. Phytopathology, 107, 1062–1068.

Gao W F, Zhu P, Huang H L. 2016. Recombinase polymerase amplification: A new DNA/RNA amplification strategy. Chinese Journal of Biochemistry and Molecular Biology, 32, 627–634. (in Chinese)

Ghosh D K, Kokane S B, Kokane A D, Warghane A J, Motghare M R, Bhose S, Sharma A K, Reddy M K. 2018. Development of a recombinase polymerase based isothermal amplification combined with lateral flow assay (HLB-RPA-LFA) for rapid detection of “Candidatus Liberibacter asiaticus”. PLoS ONE, 13, e0208530.

Guo W W, Gao Y X, Yu Z M, Xiao Y H, Zhang Z G, Zhang H F. 2019. The adenylate cyclase UvAc1 and phosphodiesterase UvPdeH control the intracellular cAMP level, development, and pathogenicity of the rice false smut fungus Ustilaginoidea virens. Fungal Genetics and Biology, 129, 65–73.

Huang W, Zhang H, Xu J S, Wang S, Kong X J, Ding W, Xu J, Feng J. 2017. Loop-mediated isothermal amplification method for the rapid detection of Ralstonia solanacearum phylotype I mulberry strains in China. Frontiers in Plant Science, 8, 76.

Ivanov A V, Safenkova I V, Drenova N V, Zherdev A V, Dzantiev B D. 2020. Development of lateral flow assay combined with recombinase polymerase amplification for highly sensitive detection of Dickeya solani. Molecular and Cellular Probes, 53, 101622.

Jeong H W, Lee H J, Cho I S, Ju H J, Jeong R D. 2021. Rapid detection of plum pox virus by reverse transcription recombinase polymerase amplification. Journal of Plant Diseases and Protection, 128, 881–885.

Jin X L, Yang G J, Xu X G, Yang H, Feng H K, Li Z H, Shen J X, Zhao C J, Lan Y B. 2015. Combined multi-temporal optical and radar parameters for estimating LAI and biomass in winter wheat using HJ and RADARSAR-2 data. Remote Sensing, 7, 13251–13272.

Ju Y L, Li C F, Shen P F, Wan N, Han W B, Pan Y M. 2020. Rapid and visual detection of Verticillium dahliae using recombinase polymerase amplification combined with lateral flow dipstick. Crop Protection, 136, 105226.

Karakkat B B, Hockemeyer K, Franchett M, Olson M, Mullenberg C, Koch P L. 2018. Detection of root-infecting fungi on cool-season turfgrasses using loop-mediated isothermal amplification and recombinase polymerase amplification. Journal of Microbiological Methods, 151, 90–98.

Lau H Y, Wang Y L, Wee E J H, Botella J R, Trau M. 2016. Field demonstration of a multiplexed point-of-care diagnostic platform for plant pathogens. Analytical Chemistry, 88, 8074–8081.

Li H, Ni D H, Duan Y B, Chen Y, Li J, Song F S, Li L, Wei P C, Yang J B. 2013. Quantitative detection of the rice false smut pathogen Ustilaginoidea virens by real-time PCR. Genetics and Molecular Research, 12, 6433–6441.

Lobato I M, O’Sullivan C K. 2018. Recombinase polymerase amplification: Basics, applications and recent advances. TrAC Trends in Analytical Chemistry, 98, 19–35.

Londono M A, Harmon C L, Polston J E. 2016. Evaluation of recombinase polymerase amplification for detection of begomoviruses by plant diagnostic clinics. Virology Journal, 13, 48.

Lu X Y, Xu H, Song W, Yang Z T, Yu J, Tian Y E, Jiang M, Shen D Y, Dou D L. 2021. Rapid and simple detection of Phytophthora cactorum in strawberry using a coupled recombinase polymerase amplification-lateral flow strip assay. Phytopathology Research, 3, 12.

Lu X Y, Zheng Y, Zhang F, Yu J, Dai T T, Wang R B, Tian Y E, Xu H, Shen D Y, Dou D L. 2020. A rapid, equipment-free method for detecting Phytophthora infestans in the field using a lateral flow strip-based recombinase polymerase amplification assay. Plant Disease, 104, 2774–2778.

Miles T, Burkhardt A, Martin F. 2016. Utilizing mitochondrial loci to develop TaqMan and recombinase polymerase amplification assays for the genus Pythium. Phytopathology, 106, 115–130.

Munawar M, Toljamo A, Martin F, Kokko H. 2019. Recombinase polymerase amplification assay for fast, sensitive and on-site detection of Phytophthora cactorum without DNA extraction. European Journal of Horticultural Science, 84, 14–19.

Nicolaisen M, Suproniene S, Nielsen L K, Lazzaro I, Spliid N H, Justesen A F. 2009. Real-time PCR for quantification of eleven individual Fusarium species in cereals. Journal of Microbiological Methods, 76, 234–240.

Piepenburg O, Williams C H, Stemple D L, Armes N A. 2006. DNA detection using recombination proteins. PLoS Biology, 4, e204.

Polstra A M, Goudsmit J, Cornelissen M. 2002. Development of real-time NASBA assays with molecular beacon detection to quantify mRNA coding for HHV-8 lytic and latent genes. BMC Infectious Diseases, 2, 18.

Qiu J H, Meng S, Deng Y Z, Huang S W, Kou Y J. 2019. Ustilaginoidea virens: A fungus infects rice flower and threats world rice production. Rice Science, 26, 199–206.

Rohrman B, Richards-Kortum R. 2015. Inhibition of recombinase polymerase amplification by background DNA: A lateral flow-based method for enriching target DNA. Analytical Biochemistry, 87, 1963–1967.

Samuelian S K, Greer L A, Savocchia S, Steel C C. 2011. Detection and monitoring of greeneria uvicola and Colletotrichum acutatum development on grapevines by real-time PCR. Plant Disease, 95, 298–303.

Silva G, Oyekanmi J, Nkere C K, Bomer M, Kumar P L, Seal S E. 2018. Rapid detection of potyviruses from crude plant extracts. Analytical Biochemistry, 546, 17–22.

Strayer-Scherer A, Jones J B, Paret M L. 2019. Recombinase polymerase amplification assay for field detection of tomato bacterial spot pathogens. Phytopathology, 109, 690–700.

Sun G, Liu J, Li G, Zhang X, Chen T, Chen J, Zhang H, Wang D, Sun F, Pan H. 2015. Quick and accurate detection and quantification of Magnaporthe oryzae in rice using real-time quantitative polymerase chain reaction. Plant Disease, 99, 219–224.

Sun N, Wang Y, Yao X Y, Chen F F, Gao D Y, Wang W P, Li X J. 2019. Visual signal generation for the detection of influenza viruses by duplex recombinase polymerase amplification with lateral flow dipsticks. Analytical and Bioanalytical Chemistry, 41, 3591–3602.

Sun W, Fan J, Fang A, Li Y, Tariqjaveed M, Li D, Hu D, Wang W M. 2020. Ustilaginoidea virens: Insights into an emerging rice pathogen. Annual Review of Phytopathology, 58, 363–385.

Tang J, Zheng L, Jia Q, Liu H, Hsiang T, Huang J. 2017. PCR markers derived from comparative genomics fordetection and identification of the rice pathogen Ustilaginoidea virens in plant yissues. Plant Disease, 101, 1515–1521.

Tang Y X, Jin J, Hu D W, Yong M L, Xu Y, He L P. 2013. Elucidation of the infection process of Ustilaginoidea virens (teleomorph: Villosiclava virens) in rice spikelets. Plant Pathology, 62, 1–8.

Wang G, He D, Zhao F C, Hu J Q, Lee Y W, Shi J R, Xu J H. 2020. Extraction and purification of ustiloxin A from rice false smut balls by a combination of macroporous resin and high-speed countercurrent chromatography. Food Production, Processing and Nutrition, 2, 29.

Xu J Y, Yang X, Wu C P, Chen Z P, Dai T T. 2022a. Recombinase polymerase amplification-lateral flow dipstick assay for rapid detection of Fusarium circinatum based on a newly identified unique target gene. Plant Disease, 107, 1067–1074.

Xu J Y, Yang X, Wu C P, Chen Z P, Zhou Z W, Chen Z P, Dai T T. 2022b. First report of Phytophthora nicotianae causing dianthus chinensis root rot and foliage blight in China. Plant Disease, 106, 2002.

Yang X, Al-Attala M N, Zhang Y, Zhang A F, Zang H Y, Gu C Y, Gao T C, Chen Y, Ali F, Li Y F, Yao J, Zhu J G. 2018. Rapid Detection of Ustilaginoidea virens from rice using loop-mediated isothermal amplification assay. Plant Disease, 102, 1741–1747.

Yang Y, Qin X D, Zhang W, Li Z Y, Zhang S J, Li Y M, Zhang Z D. 2017. Development of an isothermal recombinase polymerase amplification assay for rapid detection of pseudorabies virus. Molecular and Cellular Probes, 33, 32–35.

Yu J, Shen D, Dai T, Lu X, Xu H, Dou D. 2019. Rapid and equipment-free detection of Phytophthora capsici using lateral flow strip-based recombinase polymerase amplification assay. Letters in Applied Microbiology, 69, 64–70.

Yuan S, Linquist B A, Wilson L T, Cassman K G, Stuart A M, Pede V, Miro B, Saito K, Agustiani N, Aristya V E, Krisnadi L Y, Zanon A J, Heinemann A B, Carracelas G, Subash N, Brahmanand P S, Li T, Peng S B, Grassini P. 2021. Sustainable intensification for a larger global rice bowl. Nature Communications, 12, 7163.

Zhang J J, Zhang B, Yuan Y, Gao X Q, Guo M, Guan Y F. 2020. Feasibility of rolling circle amplification for directly detecting miR-93-5p. Journal of China Medical University, 49, 10–15.

Zhou J, Xia H M, Jiao B B, He H B, Dai T T. 2022. First report of crown and root rot caused by Fusarium solani on Photinia×fraseri in China. Plant Disease, 107, 1231.

Zhou Z W, Yang X, Wu C P, Chen Z P, Dai T T. 2022. Whole-genome sequence resource of Phytophthora pini, the causal pathogen of foliage blight and shoot dieback of Rhododendron pulchrum. Molecular Plant Microbe Interactions, 35, 944–948.