中国农业科学 ›› 2025, Vol. 58 ›› Issue (5): 1017-1031.doi: 10.3864/j.issn.0578-1752.2025.05.015

• 畜牧·兽医 • 上一篇    下一篇

畜禽杂种优势形成机制与预测方法研究进展

孙研研1(), 倪爱心1,2(), 杨涵涵1, 袁经纬1, 陈继兰1()   

  1. 1 中国农业科学院北京畜牧兽医研究所/畜禽生物育种全国重点实验室,中国北京 100193
    2 瓦赫宁根大学及研究中心,荷兰瓦赫宁根 6700AH
  • 收稿日期:2024-10-17 接受日期:2025-01-13 出版日期:2025-03-07 发布日期:2025-03-07
  • 通信作者:
    陈继兰,E-mail:
  • 联系方式: 孙研研,E-mail:yanyansun2014@163.com。倪爱心,E-mail:naixin951@163.com。孙研研和倪爱心为同等贡献作者。
  • 基金资助:
    国家自然科学基金(32172721); 现代农业产业技术体系国家蛋鸡体系(CARS-40); 中国农业科学院科技创新工程(ASTIP-2021-IAS-06)

Research Progress on Mechanisms Interpretation and Prediction Methods for Heterosis of Livestock

SUN YanYan1(), NI AiXin1,2(), YANG HanHan1, YUAN JingWei1, CHEN JiLan1()   

  1. 1 State Key Laboratory of Animal Biotech Breeding/Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China
    2 Wageningen University and Research, Wageningen 6700AH, Netherlands
  • Received:2024-10-17 Accepted:2025-01-13 Published:2025-03-07 Online:2025-03-07

摘要:

杂种优势是遗传结构不同群体的杂交后代在生活力、繁殖力以及适应力等方面优于亲本群体的平均值或者超过亲本群体的现象,是一种重要的遗传资源。杂种优势在现代农业中发挥着重要作用,有助于提高畜禽和农作物的产量和品质、快速改良性状、加速培育新品种和增加遗传多样性等,进而高效提升畜牧业和种植业的生产效率,降低成本。虽然杂种优势的发现已逾百年,但其遗传基础的解析远远落后于其在农业生产中的应用。杂种优势复杂形成机制的研究是遗传育种领域的一个经典话题和活跃前沿,但得到明确的结论却十分有限。针对杂种优势的表现特点,科学家先后提出显性学说、超显性学说和上位学说等多种杂种优势形成的假说,揭示杂种优势的遗传基础是非加性遗传效应,但是这些假说均是基于单基因效应而言,过于理想化和简单化;DNA、RNA和蛋白质等不同水平上的探索陆续发现多效应并存的现象。尤其在水稻和玉米等杂交育种作物上陆续开展的相关研究挖掘了杂种优势效应位点,丰富了对作物杂种优势形成机制的认知,推动了精准分子设计育种等作物育种技术的变革。杂种优势在猪、鸡等畜禽的育种中也广泛应用,畜牧业发达国家80%以上的商品猪肉、鸡肉和鸡蛋均通过杂交品种获得。高效应用杂种优势服务于生产,提前评估杂种优势是必要的。群间和群内表型方差比预测法、杂种遗传力预测法、分子标记预测法,这些新方法有助于解决通过传统的杂交试验的方法来预测杂种优势的周期长、易受环境影响和人力财力消耗大等问题,但是预测的准确性具有局限性。杂种优势涉及多个层面的相互作用,而且畜禽遗传背景复杂,育种周期长,使得畜禽杂种优势形成的机制研究和准确的预测方法依然面临挑战。近年来,测序技术的逐步应用,为理解畜禽杂种优势的分子调控网络提供了新的视角。QTL定位和全基因组关联分析从基因组水平上揭示杂种优势的分子机制,筛选相关的分子标记应用于畜禽品种的选择和选配。结合多组学研究,如转录组和代谢组,影响杂种优势的关键功能基因、变异及其代谢物能被更精确地定位,有助于杂交改良。本综述系统阐述了畜禽领域杂种优势形成机制和预测方法方面的研究进展,展望未来的研究会将通过结合多组学测序数据和生信分析来逐步阐明杂种优势的复杂机理,鉴定与杂种优势相关的基因、分子标记,并创新杂种优势的预测方法,为杂种优势利用提供更准确的方向。

关键词: 杂种优势, 畜禽育种, 分子机制, 预测方法

Abstract:

Heterosis is a phenomenon where the offspring of genetically distinct populations exhibit superior vitality, reproductive capacity, and adaptability compared with the average of their parent populations, which is an important genetic resource. Heterosis plays a significant role in modern agriculture, contributing to increase yields and quality of livestock and crops, rapidly improve traits, accelerate the breeding of new varieties, and enhance genetic diversity, thereby efficiently boosting the production of animal husbandry and agriculture while reducing costs. Despite the discovery of heterosis is over a century ago, the elucidation of its genetic basis lags far behind its application in agricultural production. The study of the complex formation mechanism of heterosis is a classic and an active topic in the field of genetics and breeding, but the clear conclusions remain limited. In response to the characteristics of heterosis, scientists have successively proposed various hypotheses for its formation, such as the dominance hypothesis, overdominance hypothesis, and epistasis hypothesis, revealing that the genetic basis of heterosis was non-additive genetic effects. However, these hypotheses are based on the effects of single genes, which are overly idealized and simplistic. Explorations at different levels, such as DNA, RNA, and proteins, have successively discovered the coexistence of multiple genetic effects. Particularly in hybrid crops like rice and corn, the related researches have been continuously identified the loci of heterosis effects, enriched the understanding of the formation mechanism for heterosis in crops, and promoted the transformation of crop breeding technologies, such as precise molecular design breeding. Heterosis is also widely applied in the breeding of livestock and poultry. In developed countries with advanced animal husbandry, over 80% of commercial pork, chicken, and eggs are obtained from hybrid breeds. To efficiently apply heterosis in production for animal husbandry, it is necessary to predict heterosis in advance. New methods, such as the inter- and intra-group phenotypic variance ratio prediction, hybrid heritability prediction, and molecular marker prediction, have been developed to solve the long experimental cycle, environmental sensitivity, and high human and financial costs associated with traditional hybridization experiments for predicting heterosis. However, the accuracy of these prediction methods is limited. Heterosis involves in interaction of multiple levels, and because of the complex genetic background and long breeding cycle, it is still a big challenge for the study of the heterosis formation mechanism and accurate prediction methods. In recent years, the gradual application of sequencing technology has provided a new perspective for understanding the molecular regulatory network of heterosis in livestock and poultry. QTL mapping and genome-wide association study reveal the molecular mechanism of heterosis at the genomic level, and the identified molecular makers are applied in selection and breeding. Combined with multi-omics researches, such as transcriptomics and metabolomics, the key functional genes, variations, and metabolites affecting heterosis can be more precisely located, which facilitate hybrid improvement. This review elaborated the research progress in the formation mechanism and prediction methods for heterosis in the field of livestock and poultry. For looking forward to future, the researches will gradually clarify the complex mechanism of heterosis by integrating multi-omics sequencing data and bioinformatics analysis, in order to identify genes and molecular markers related to heterosis, and innovate new prediction methods, which will provide a more accurate direction for the utilization of heterosis.

Key words: heterosis, animal breeding, molecular mechanism, prediction method