中国农业科学 ›› 2016, Vol. 49 ›› Issue (1): 54-68.doi: 10.3864/j.issn.0578-1752.2016.01.005

• 耕作栽培·生理生化·农业信息技术 • 上一篇    下一篇

玉米早期发育阶段粒位效应的蛋白质组学分析

于涛,李耕,刘鹏,董树亭,张吉旺,赵斌,柏晗   

  1. 山东农业大学农学院/作物生物学国家重点实验室,山东泰安 271018
  • 收稿日期:2015-05-22 出版日期:2016-01-01 发布日期:2016-01-01
  • 通讯作者: 刘鹏,Tel:0538-8245838;E-mail:liupengsdau@126.com
  • 作者简介:于涛,E-mail:yutaosdnd@163.com
  • 基金资助:
    国家自然科学基金(31371576,31401339)、国家“十二五”科技支撑计划(2011BAD16B14,2013BAD07B06-2)、国家公益性行业(农业)科研专项经费项目(201203100,201203096)、山东省高等学校科技计划项目(J14LF10)、山东省农业重大应用技术创新课题

Proteomics Analysis of Grain Position Effects During Early Developmental Stages of Maize

YU Tao, LI Geng, LIU Peng, DONG Shu-ting, ZHANG Ji-wang, ZHAO Bin, BAI Han   

  1. College of Agronomy, Shandong Agricultural University/Key Laboratory of Crop Biology of China, Taian 271018, Shandong
  • Received:2015-05-22 Online:2016-01-01 Published:2016-01-01

摘要: 【目的】从蛋白质组学的角度研究早期发育阶段玉米上、中部籽粒差异表达的蛋白质,分析其功能,探明玉米粒位发育差异的分子机理。【方法】在大田条件下,以粒位效应显著的玉米品种登海661(DH661)为供试材料,90 000株/hm2密度下种植,在开花期人工饱和授粉后0、3、6、12 d取果穗上部与中部籽粒。采用TCA-丙酮沉淀法提取籽粒总蛋白,双向电泳分离后获得蛋白质图谱。分别以0、3、6、12 d中部籽粒的凝胶作为参考胶,将上部籽粒凝胶与其进行比对,利用Image master 2D 7.0软件分析籽粒早期发育不同阶段上、中粒位蛋白质表达的差异。通过 MALDI-TOF/TOF MS 质谱分析及 NCBI数据库搜索,对差异表达蛋白质进行鉴定并分析其涉及的生物学功能。【结果】较高密度种植后,果穗籽粒早期发育阶段共检测到超过1000个清晰蛋白质点。通过图像处理软件成对匹配分析,果穗上、中部籽粒早期发育阶段差异蛋白质点为66个,其中52个蛋白质点与NCBI数据库匹配,鉴定率为78.8%。差异蛋白质涉及籽粒呼吸与能量代谢(10个蛋白质点,19%)、胁迫与防御(9个蛋白质点,17%)、蛋白质代谢(9个蛋白质点,17%)、氮代谢(6个蛋白质点,11%)、细胞分化与增殖(5个蛋白质点,10%)、转录与翻译(5个蛋白质点,10%)、次生物质代谢(3个蛋白质点,6%)等功能范畴。对相关的差异蛋白质表达丰度分析,与中部籽粒相比,上部籽粒涉及细胞分化与增殖、呼吸与能量代谢的大部分蛋白质在一个或多个时间段内均显著下调,说明上部籽粒胚乳细胞增殖及呼吸能量代谢能力显著降低。同时,上部籽粒涉及胁迫与防御的多种抗氧化酶系、乙二醛酶1以及涉及蛋白质代谢的4个分子伴侣蛋白质在发育早期也处于低水平表达,说明上部籽粒应对逆境条件防御能力较弱且蛋白质结构不稳定。另外,与中部籽粒相比,上部籽粒氮代谢中丙氨酸转氨酶以及S-腺苷甲硫氨酸合成酶1在授粉后6—12 d内均下调表达,说明上部籽粒氮同化能力较弱,影响后续的氨基酸合成与蛋白质代谢过程。结论】与果穗中部籽粒相比,上部籽粒细胞分化与增殖相关蛋白质的表达水平较低,呼吸与能量代谢能力较弱,导致上部籽粒库容与库活性降低。另外,面对氧化应激等逆境时,上部籽粒相关的抗氧化酶以及分子伴侣蛋白表达水平较低,致使其防御能力低于中部籽粒。丙氨酸转氨酶、S-腺苷甲硫氨酸合成酶1(SAMS)的差异表达也可能是导致粒位效应的重要原因。

关键词: 玉米, 粒位效应, 早期发育, 差异表达蛋白质, 蛋白质功能

Abstract: 【Objective】In order to understand the molecular mechanism of maize grain position effects, the function of differential expression proteins between upper and middle grains during the early developmental stages of maize were studied by using an approach of plant proteomics.【Method】Denghai661(DH661) with significant grain position effects was used as experimental material and planted at 90 000 plants/hm2 in a field. Upper and middle grains were harvested after flowering artificial saturation pollination at 0, 3, 6, and 12 d. The total proteins were extracted by the trichloroacetate (TCA)-acetone precipitation method, and the protein profiles were set up by two-dimensional gel electrophoresis (SDS-PAGE). The upper grain gel was compared to middle grain gel as a reference at 0, 3, 6, 12 d, respectively. The differential expression proteins between the upper and middle grains were analyzed with Image master 2D 7.0. The functions of these differentially expressed proteins were identified by matrix-assisted laser desorption/ionization time-of-flight/time-of-flight mass spectrometry (MALDI-TOF/TOF) analysis and NCBI database searching.【Result】After high density planting, grain ears were detected at more than 1000 clear spots at early developmental stages. After a comparative proteomics analysis and MALDI-TOF/TOF mass spectrometry (MS), 66 protein spots were found significantly differentially expressed between upper and middle grains during the early developmental stages, of which 52 protein spots were successfully matched in the NCBI database and the identification rate was about 78.8%. These proteins were involved in grain respiration and energy metabolism (10 spots, 19%), stress and defense (9 spots, 17%), protein metabolism (9 spots, 17%), nitrogen metabolism (6 sports, 11%), cell differentiation and proliferation (5 spots, 10%), transcription and translation (5 spots, 10%), secondary metabolism (3 spots, 6%), and other function categories. Analyzing related proteins expression differences in abundance, compared with the middle grains, most of proteins expressed abundance in the upper grains involved in cell differentiation and proliferation, respiration and energy metabolism were significantly lower at one or more of the time periods, indicating that the upper grains’ ability of endosperm cell proliferation and respiratory energy metabolism significantly reduced. Meanwhile, the upper grains’ proteins involved in stress and defense of a variety of antioxidant enzyme system, glyoxalase I, and four molecular chaperone proteins involved in protein metabolism were at a low level expression at the early development, indicating that the upper grains have weaker defense capability and less stable protein structure to stress conditions. In addition, compared with the middle grains, the upper grains alanine aminotransferase, and S-adenosine methionine synthetase 1 involved in nitrogen metabolism were down regulated within 6 to 12 days after pollination, indicating that the upper grains had a weak nitrogen assimilation ability and influence the subsequent amino acid synthesis and protein metabolism process.【Conclusion】Compared with the middle grains, the upper grains’ proteins involved in cell differentiation and proliferation are at low levels of expression and have weaker respiratory and energy metabolism vitality, resulting in the upper grains having lower sink sizes and sink activities. Additionally, when responding to oxidative stress and other stress conditions, because of the low level of expression of antioxidant enzymes and the molecular chaperone proteins, the regulatory capacity of upper grains is less than the middle grains. Differentially expression of alanine aminotransferase and SAMS also may be an important cause of grain position effects.

Key words: maize, grain position effects, early developmental stages, differential expression proteins, protein function