Archambaud C, Salcedo S P, Lelouard H, Devilard E, de Bovis B, Van Rooijen N, Gorvel J P, Malissen B. 2010. Contrasting roles of macrophages and dendritic cells in controlling initial pulmonary Brucella infection. European Journal of Immunology, 40, 3458–3471.

Aubry C, Goulard C, Nahori M A, Cayet N, Decalf J, Sachse M, Boneca I G, Cossart P, Dussurget O. 2011. OatA, a peptidoglycan O-acetyltransferase involved in Listeria monocytogenes immune escape, is critical for virulence. The Journal of Infectious Diseases, 204, 731–740.

Barak R, Prasad K, Shainskaya A, Wolfe A J, Eisenbach M. 2004. Acetylation of the chemotaxis response regulator CheY by acetyl-CoA synthetase purified from Escherichia coli. Journal of Molecular Biology, 342, 383–401.

von Bargen K, Gorvel J P, Salcedo S P. 2012. Internal affairs: Investigating the Brucella intracellular lifestyle. FEMS Microbiology Reviews, 36, 533–562.

Borghesan E, Smith E P, Myeni S, Binder K, Knodler L A, Celli J. 2021. A Brucella effector modulates the Arf6-Rab8a GTPase cascade to promote intravacuolar replication. The EMBO Journal, 40, e107664.

Cain J A, Solis N, Cordwell S J. 2014. Beyond gene expression: The impact of protein post-translational modifications in bacteria. Journal of Proteomics, 97, 265–286.

Celli J, de Chastellier C, Franchini D M, Pizarro-Cerda J, Moreno E, Gorvel J P. 2003. Brucella evades macrophage killing via VirB-dependent sustained interactions with the endoplasmic reticulum. The Journal of Experimental Medicine, 198, 545–556.

Choudhary C, Weinert B T, Nishida Y, Verdin E, Mann M. 2014. The growing landscape of lysine acetylation links metabolism and cell signalling. Nature Reviews Molecular Cell Biology, 15, 536–550.

Corona A K, Saulsbery H M, Corona Velazquez A F, Jackson W T. 2018. Enteroviruses remodel autophagic trafficking through regulation of host SNARE proteins to promote virus replication and cell exit. Cell Reports, 22, 3304–3314.

Deng X, He J, Wang Y, Yang Q, Yi J, Zhang H, Wang Y, Miao Y, Wang Z, Chen C. 2022. Deletion of the type IV secretion system promoter VirB in Brucella abortus A19 strain attenuated the virulence of the bacteria and promotes autophagy. Canadian Journal of Microbiology, 68, 165–176.

Diao J, Liu R, Rong Y, Zhao M, Zhang J, Lai Y, Zhou Q, Wilz L M, Li J, Vivona S, Pfuetzner R A, Brunger A T, Zhong Q. 2015. ATG14 promotes membrane tethering and fusion of autophagosomes to endolysosomes. Nature, 520, 563–566.

Ding B, Zhang G, Yang X, Zhang S, Chen L, Yan Q, Xu M, Banerjee A K, Chen M. 2014. Phosphoprotein of human parainfluenza virus type 3 blocks autophagosome-lysosome fusion to increase virus production. Cell Host & Microbe, 15, 564–577.

Gaudet P, Livstone M S, Lewis S E, Thomas P D. 2011. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in Bioinformatics, 12, 449–462.

Ghosh S, Padmanabhan B, Anand C, Nagaraja V. 2016. Lysine acetylation of the Mycobacterium tuberculosis HU protein modulates its DNA binding and genome organization. Molecular Microbiology, 100, 577–588.

Grabiec A M, Potempa J. 2018. Epigenetic regulation in bacterial infections: Targeting histone deacetylases. Critical Reviews in Microbiology, 44, 336–350.

Guo B, Liang Q, Li L, Hu Z, Wu F, Zhang P, Ma Y, Zhao B, Kovács A L, Zhang Z, Feng D, Chen S, Zhang H. 2014. O-GlcNAc-modification of SNAP-29 regulates autophagosome maturation. Nature Cell Biology, 16, 1215–1226.

Guo F, Zhang H, Chen C, Hu S, Wang Y, Qiao J, Ren Y, Zhang K, Wang Y, Du G. 2012. Autophagy favors Brucella melitensis survival in infected macrophages. Cellular & Molecular Biology Letters, 17, 249–257.

Guo H, Zhang J, Wang Y, Bu C, Zhou Y, Fang Q. 2017. Comparative proteomic analysis of lysine acetylation in fish CIK cells infected with aquareovirus. International Journal of Molecular Sciences, 18, 2419.

Gutierrez M G, Master S S, Singh S B, Taylor G A, Colombo M I, Deretic V. 2004. Autophagy is a defense mechanism inhibiting BCG and Mycobacterium tuberculosis survival in infected macrophages. Cell, 119, 753–766.

Henriksen P, Wagner S A, Weinert B T, Sharma S, Bacinskaja G, Rehman M, Juffer A H, Walther T C, Lisby M, Choudhary C. 2012. Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae. Molecular & Cellular Proteomics, 11, 1510–1522.

Hong Y, Cao X, Han Q, Yuan C, Zhang M, Han Y, Zhu C, Lin T, Lu K, Li H, Fu Z, Lin J. 2016. Proteome-wide analysis of lysine acetylation in adult Schistosoma japonicum worm. Journal of Proteomics, 148, 202–212.

Huang J, Brumell J H. 2014. Bacteria-autophagy interplay: A battle for survival. Nature Reviews Microbiology, 12, 101–114.

Itakura E, Kishi-Itakura C, Mizushima N. 2012. The hairpin-type tail-anchored SNARE syntaxin 17 targets to autophagosomes for fusion with endosomes/lysosomes. Cell, 151, 1256–1269.

Jiao H, Zhou Z, Li B, Xiao Y, Li M, Zeng H, Guo X, Gu G. 2021. The mechanism of facultative intracellular parasitism of Brucella. International Journal of Molecular Sciences, 22, 3673.

Ke Y, Wang Y, Li W, Chen Z. 2015. Type IV secretion system of Brucella spp. and its effectors. Frontiers in Cellular and Infection Microbiology, 5, 72.

Keller M D, Torres V J, Cadwell K. 2020. Autophagy and microbial pathogenesis. Cell Death & Differentiation, 27, 872–886.

Lai J K F, Sam I C, Verlhac P, Baguet J, Eskelinen E L, Faure M, Chan Y F. 2017. 2BC non-structural protein of enterovirus A71 interacts with SNARE proteins to trigger autolysosome formation. Viruses, 9, 169.

Matthias P, Yoshida M, Khochbin S. 2008. HDAC6 a new cellular stress surveillance factor. Cell Cycle, 7, 7–10.

Menzies K J, Zhang H, Katsyuba E, Auwerx J. 2016. Protein acetylation in metabolism-metabolites and cofactors. Nature Reviews Endocrinology, 12, 43–60.

Miller C, Celli J. 2016. Avoidance and subversion of eukaryotic homeostatic autophagy mechanisms by bacterial pathogens. Journal of Molecular Biology, 428, 3387–3398.

Mizushima N, Murphy L O. 2020. Autophagy assays for biological discovery and therapeutic development. Trends in Biochemical Sciences, 45, 1080–1093.

Mohamud Y, Shi J, Qu J, Poon T, Xue Y C, Deng H, Zhang J, Luo H. 2018. Enteroviral infection inhibits autophagic flux via disruption of the SNARE complex to enhance viral replication. Cell Reports, 22, 3292–3303.

Morelli E, Speranza E A, Pellegrino E, Beznoussenko G V, Carminati F, Garré M, Mironov A A, Onorati M, Vaccari T. 2021. Activity of the SNARE protein SNAP29 at the endoplasmic reticulum and golgi apparatus. Frontiers in Cell and Developmental Biology, 9, 637565.

Myeni S, Child R, Ng T W, Kupko J J, Wehrly T D, Porcella S F, Knodler L A, Celli J. 2013. Brucella modulates secretory trafficking via multiple type IV secretion effector proteins. PLoS Pathogens, 9, e1003556.

Narita T, Weinert B T, Choudhary C. 2019a. Author Correction: Functions and mechanisms of non-histone protein acetylation. Nature Reviews Molecular Cell Biology, 20, 508.

Narita T, Weinert B T, Choudhary C. 2019b. Functions and mechanisms of non-histone protein acetylation. Nature Reviews Molecular Cell Biology, 20, 156–174.

Ogawa M, Yoshimori T, Suzuki T, Sagara H, Mizushima N, Sasakawa C. 2005. Escape of intracellular Shigella from autophagy. Science, 307, 727–731.

Pandey R, Müller A, Napoli C A, Selinger D A, Pikaard C S, Richards E J, Bender J, Mount D W, Jorgensen R A. 2002. Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Research, 30, 5036–5055.

Pesce Viglietti A I, Gentilini M V, Arriola Benitez P C, Giambartolomei G H, Delpino M V. 2018. Abortus modulates osteoblast function through the induction of autophagy. Frontiers in Cellular and Infection Microbiology, 8, 425.

Pietrocola F, Galluzzi L, Bravo-San Pedro J M, Madeo F, Kroemer G. 2015. Acetyl coenzyme A: A central metabolite and second messenger. Cell Metabolism, 21, 805–821.

Pizarro-Cerdá J, Méresse S, Parton R G, van der Goot G, Sola-Landa A, Lopez-Goñi I, Moreno E, Gorvel J P. 1998. Brucella abortus transits through the autophagic pathway and replicates in the endoplasmic reticulum of nonprofessional phagocytes. Infection and Immunity, 66, 5711–5724.

Py B F, Lipinski M M, Yuan J. 2007. Autophagy limits Listeria monocytogenes intracellular growth in the early phase of primary infection. Autophagy, 3, 117–125.

Ren J, Sang Y, Lu J, Yao Y F. 2017. Protein acetylation and its role in bacterial virulence. Trends in Microbiology, 25, 768–779.

Ren J, Sang Y, Tan Y, Tao J, Ni J, Liu S, Fan X, Zhao W, Lu J, Wu W, Yao Y F. 2016. Acetylation of lysine 201 inhibits the DNA-binding ability of PhoP to regulate salmonella virulence. PLoS Pathogens, 12, e1005458.

Salcedo S P, Marchesini M I, Lelouard H, Fugier E, Jolly G, Balor S, Muller A, Lapaque N, Demaria O, Alexopoulou L, Comerci D J, Ugalde R A, Pierre P, Gorvel J P. 2008. Brucella control of dendritic cell maturation is dependent on the TIR-containing protein Btp1. PLoS Pathogens, 4, e21.

Shen Q, Shi Y, Liu J, Su H, Huang J, Zhang Y, Peng C, Zhou T, Sun Q, Wan W, Liu W. 2021. Acetylation of STX17 (syntaxin 17) controls autophagosome maturation. Autophagy, 17, 1157–1169.

Siqueira M D S, Ribeiro R M, Travassos L H. 2018. Autophagy and its interaction with intracellular bacterial pathogens. Frontiers in Immunology, 9, 935.

Starr T, Child R, Wehrly T D, Hansen B, Hwang S, López-Otin C, Virgin H W, Celli J. 2012. Selective subversion of autophagy complexes facilitates completion of the Brucella intracellular cycle. Cell Host & Microbe, 11, 33–45.

Steegmaier M, Yang B, Yoo J S, Huang B, Shen M, Yu S, Luo Y, Scheller R H. 1998. Three novel proteins of the syntaxin/SNAP-25 family. Journal of Biological Chemistry, 273, 34171–34179.

Thao S, Chen C S, Zhu H, Escalante-Semerena J C. 2010. Nε-lysine acetylation of a bacterial transcription factor inhibits Its DNA-binding activity. PLoS ONE, 5, e15123.

Valleau D, Little D J, Borek D, Skarina T, Quaile A T, Di Leo R, Houliston S, Lemak A, Arrowsmith C H, Coombes B K, Savchenko A. 2018. Functional diversification of the NleG effector family in enterohemorrhagic Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America, 115, 10004–10009.

Wang K, Ma H, Liu H, Ye W, Li Z, Cheng L, Zhang L, Lei Y, Shen L, Zhang F. 2019. The glycoprotein and nucleocapsid protein of hantaviruses manipulate autophagy flux to restrain host innate immune responses. Cell Reports, 27, 2075-2091.e2075.

Wang Q, Zhang Y, Yang C, Xiong H, Lin Y, Yao J, Li H, Xie L, Zhao W, Yao Y, Ning Z B, Zeng R, Xiong Y, Guan K L, Zhao S, Zhao G P. 2010. Acetylation of metabolic enzymes coordinates carbon source utilization and metabolic flux. Science, 327, 1004–1007.

Wang Z, Yang X, Liu C, Li X, Zhang B, Wang B, Zhang Y, Song C, Zhang T, Liu M, Liu B, Ren M, Jiang H, Zou J, Liu X, Zhang H, Zhu W G, Yin Y, Zhang Z, Gu W, Luo J. 2019. Acetylation of PHF5A modulates stress responses and colorectal carcinogenesis through alternative splicing-mediated upregulation of KDM3A. Molecular Cell, 74, 1250-1263.e1256.

Wesolowski J, Caldwell V, Paumet F. 2012. A novel function for SNAP29 (synaptosomal-associated protein of 29 kDa) in mast cell phagocytosis. PLoS ONE, 7, e49886.

Xie L, Zeng J, Luo H, Pan W, Xie J. 2014. The roles of bacterial GCN5-related N-acetyltransferases. Critical Reviews in Eukaryotic Gene Expression, 24, 77–87.

Yan J, Barak R, Liarzi O, Shainskaya A, Eisenbach M. 2008. In vivo acetylation of CheY, a response regulator in chemotaxis of Escherichia coli. Journal of Molecular Biology, 376, 1260–1271.

Yang X J, Seto E. 2008. The Rpd3/Hda1 family of lysine deacetylases: From bacteria and yeast to mice and men. Nature Reviews Molecular Cell Biology, 9, 206–218.

Zhang J, Li M, Li Z, Shi J, Zhang Y, Deng X, Liu L, Wang Z, Qi Y, Zhang H. 2019. Deletion of the type IV secretion system effector vcea promotes autophagy and inhibits apoptosis in Brucella-infected human trophoblast cells. Current Microbiology, 76, 510–519.

Zhi F, Zhou D, Bai F, Li J, Xiang C, Zhang G, Jin Y, Wang A. 2019. VceC mediated IRE1 pathway and inhibited CHOP-induced apoptosis to support Brucella replication in goat trophoblast cells. International Journal of Molecular Sciences, 20, 4104.

Zhou S, Yang Q, Yin C, Liu L, Liang W. 2016. Systematic analysis of the lysine acetylome in Fusarium graminearum. BMC Genomics, 17, 1019.

Zhu C, Cai Y, Zhu J, Zhang L, Xing A, Pan L, Jia H, Mo S, Feng C G, Shen H, Chen X, Zhang Z. 2019. Histone deacetylase inhibitors impair the host immune response against Mycobacterium tuberculosis infection. Tuberculosis (Edinb), 118, 101861.

Zhu J, Dong Q, Dong C, Zhang X, Zhang H, Chen Z. 2020. Global lysine crotonylation alterations of host cell proteins caused by Brucella effector BspF. Frontiers in Cellular and Infection Microbiology, 10, 603457.