Attia K A,
Abdelkhalik A F, Ammar M H, Wei C, Yang J, Lightfoot D A, El-Sayed W M,
El-Shemy H A. 2009. Antisense phenotypes reveal a functional expression of OsARF1,
an auxin response factor, in transgenic rice. Current Issues in Molecular Biology, 11, 29–34.
Asad R,
Ahmad M A, Farah K, Klaus P, Ye L Z, Dai F, Zhang G P. 2023. Advances in
studies on the physiological and molecular regulation of barley tillering. Journal
of Integrative Agriculture, 22, 1–13.
Basunia M
A, Nonhebel H M, Backhouse D, McMillan M. 2021. Localised expression of OsIAA29 suggests a key role for auxin in regulating development of the dorsal aleurone
of early rice grains. Planta, 254, 40.
Cardon G,
Höhmann S, Klein J, Nettesheim K, Saedler H, Huijser P. 1999. Molecular
characterisation of the Arabidopsis SBP-box genes. Gene, 237,
91–104.
Chen Y N,
Fan X R, Song W J, Zhang Y L, Xu G H. 2012. Over-expression of OsPIN2 leads to increased tiller numbers, angle and shorter plant height through
suppression of OsLAZY1. Plant Biotechnology Journal, 10, 139–149.
Dai Z Y,
Wang J, Yang X F, Lu H, Miao X X, Shi Z Y. 2018. Modulation of plant
architecture by the miR156f-OsSPL7-OsGH3.8 pathway in rice. Journal of Experimental Botany, 69, 5117–5130.
Dai Z Y,
Wang J, Zhu M L, Miao X X, Shi Z Y. 2016. OsMADS1 represses microRNA172
in elongation of palea/lemma development in rice. Frontiers in Plant Science, 7, 1891.
Domagalska
M A, Leyser O. 2011. Signal integration in the control of shoot branching. Nature, 12, 211–221.
Fang Z M,
Ji Y Y, Hu J, Guo R K, Sun S Y, Wang X L. 2020. Strigolactones and
brassinosteroids antagonistically regulate the stability of the D53-OsBZR1
complex to determine FC1 expression in rice tillering. Molecular Plant, 13, 586–597.
Giri J,
Bhosale R, Huang G, Pandey B, Parker H, Zappala S, Yang J, Dievart A, Bureau C,
Ljung K, Price A, Rose T, Larrieu A, Mairhofer S, Sturrock C J, White P, Dupuy
L, Hawkesford M, Perin C, Liang W, et al. 2018. Rce auxin influx
carrier OsAUX1 facilitates root hair elongation in response to low
external phosphate. Nature Communications, 9, 1408.
Gomez-Roldan
V, Fermas S, Brewer P B, Puech-Pagès V, Dun E A, Pillot J P, Letisse F,
Matusova R, Danoun S, Portais J C, Bouwmeester H, Bécard G, Beveridge C A,
Rameau C, Rochange S F. 2008. Strigolactone inhibition of shoot branching. Nature, 455, 189–194.
Guo F, Han
N, Xie Y K, Fang K, Yang Y N, Zhu M Y, Wang J H, Bian H W. 2016. The
miR393a/target module regulates seed germination and seedling establishment
under submergence in rice (Oryza sativa L.). Plant, Cell
& Environment, 39, 2288–2302.
Guo S Y,
Xu Y Y, Liu H H, Mao Z W, Zhang C, Ma Y, Zhang Q R, Meng Z, Chong K. 2013. The
interaction between OsMADS57 and OsTB1 modulates rice tillering via DWARF14. Nature Communications, 4, 1566.
Hou M M,
Luo F F, Wu D X, Zhang X H, Lou M M, Shen D F, Yan M, Mao C Z, Fan X R, Xu G H,
Zhang Y L. 2021. OsPIN9, an auxin efflux carrier, is required for the
regulation of rice tiller bud outgrowth by ammonium. The New Phytologist, 229, 935–949.
Hurný A,
Cuesta C, Cavallari N, Ötvös K, Duclercq J, Dokládal L, Montesinos J C, Gallemí
M, Semerádová H, Rauter T, Stenzel I, Persiau G, Benade F, Bhalearo R, Sýkorová
E, Gorzsás A, Seche J, Mouille G, Heilmann I, De Jaeger G, et al. 2020. SYNERGISTIC ON AUXIN AND CYTOKININ 1 positively regulates growth
and attenuates soil pathogen resistance. Nature Communications, 11,
2170.
Jiang L,
Liu X, Xiong G X, Liu H H, Chen F L, Wang L, Meng X B, Liu G F, Yu H, Yuan Y D,
Yi W, Zhao L H, Ma H L, He Y Z, Wu Z S, Melcher K, Qian Q, Xu H E, Wang Y H, Li
J Y. 2013. DWARF 53 acts as a repressor of strigolactone signalling in rice. Nature, 504, 401–405.
Jin L, Qin
Q Q, Wang Y, Pu Y Y, Liu L F, Wen X, Ji S Y, Wu J G, Wei C H, Ding B, Li Y.
2016. Rice dwarf virus P2 protein hijacks auxin signaling by directly targeting
the rice OsIAA10 protein, enhancing viral infection and disease development. PLoS
Pathogens, 12, e1005847.
Jung J H,
Ju Y, Seo P J, Lee J H, Park C M. 2012. The SOC1-SPL module integrates photoperiod
and gibberellic acid signals to control flowering time in Arabidopsis. The Plant Journal, 69, 577–588.
Jung H R,
Lee D K, Choi Y D, Kim J K. 2015. OsIAA6, a member of the rice Aux/IAA gene family, is involved in drought tolerance and tiller outgrowth. Plant Science, 236, 304–312.
Kapulnik
Y, Delaux P M, Resnick N, Mayzlish-Gati E, Wininger S, Bhattacharya C,
Séjalon-Delmas N, Combier J P, Bécard G, Belausov E, Beeckman T, Dor E,
Hershenhorn J, Koltai H. 2011. Strigolactones affect lateral root formation and
root-hair elongation in Arabidopsis. Planta, 233, 209–216.
Komatsu K,
Maekawa M, Ujiie S, Satake Y, Furutani I, Okamoto H, Shimamoto K, Kyozuka J.
2003. LAX and SPA: major regulators of shoot branching in rice. Proceedings
of the National Academy of Sciences of the United States of America, 100,
11765–11770.
Li X Y,
Qian Q, Fu Z M, Wang Y H, Xiong G S, Zeng D, Wang X Q, Liu X F, Teng S, Hiroshi
F J, Yuan M, Luo D, Han B, Li J. 2003. Control of tillering in rice. Nature, 422, 618–621.
Lin H,
Wang R X, Qian Q, Yan M X, Meng X B, Fu Z M, Yan C Y, Jiang B, Su Z, Li J Y,
Wang Y H. 2009. DWARF27, an iron-containing protein required for the
biosynthesis of strigolactones, regulates rice tiller bud outgrowth. The Plant Cell, 21, 1512–1525.
Liu L H,
Ren M M, Peng P, Chun Y, Li L, Zhao J F, Fang J J, Peng L X, Yan J J, Chu J F,
Wang Y Q, Yuan S J, Li X Y. 2021. MIT1, encoding a 15-cis-ζ-carotene
isomerase, regulates tiller number and stature in rice. Journal of Genetics
and Genomics, 48, 88–91.
Liu T Z,
Zhang X, Zhang H, Cheng Z J, Liu J, Zhou C L, Luo S, Luo W F, Li S, Xing X X,
Chang Y Q, Shi C L, Ren Y L, Zhu S S, Lei C L, Guo X P, Wang J, Zhao Z C, Wang
H Y, Zhai H Q, et al. 2022. Dwarf and High Tillering1 represses rice tillering through mediating the splicing of D14 pre-mRNA. The Plant Cell, 34, 3301–3318.
Lu Z F, Yu
H, Xiong G S, Wang J, Jiao Y Q, Liu G F, Jing Y H, Meng X B, Hu X M, Qian Q, Fu
X D, Wang Y H, Li J Y. 2013. Genome-wide binding analysis of the transcription
activator ideal plant architecture1 reveals a complex network regulating
rice plant architecture. The Plant Cell, 25,
3743–3759.
Manning K,
Tör M, Poole M, Hong Y, Thompson A J, King G J, Giovannoni J J, Seymour G B.
2006. A naturally occurring epigenetic mutation in a gene encoding an SBP-box
transcription factor inhibits tomato fruit ripening. Nature Genetics, 38, 948–952.
Martin R
C, Asahina M, Liu P P, Kristof J R, Coppersmith J L, Pluskota W E, Basse G W,
Goloviznina N A, Nguyen T T, Martínez-Andújar C, Kumar M B, Pupel P, Nonogaki
H. 2010. The microRNA156 and microRNA172 gene regulation cascades at
post-germinative stages in Arabidopsis. Seed Science Research, 20, 79–87.
Mirzaei S,
Batley J, El-Mellouki T, Liu S, Meksem K, Ferguson B J, Gresshoff P M. 2017.
Neodiversification of homeologous CLAVATA1-like receptor kinase genes in
soybean leads to distinct developmental outcomes. Scientific Reports, 7, 8878.
Mockaitis
K, Estelle M. 2008. Auxin receptors and plant development: A new signaling
paradigm. Annual Review of Cell and Developmental Biology, 24,
55–80.
Müller D,
Leyser O. 2011. Auxin, cytokinin and the control of shoot branching. Annals
of Botany, 107, 1203–1212.
Nodine M
D, Bartel D P. 2010. MicroRNAs prevent precocious gene expression and enable
pattern formation during plant embryogenesis. Genes & Development, 24,
2678–2692.
Petrásek
J, Friml J. 2009. Auxin transport routes in plant development. Development, 136, 2675–2688.
Saier Jr M
H. 2000. Families of transmembrane transporters selective for amino acids and
their derivatives. Microbiology, 146, 1775–1795.
Sakurai J,
Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. 2005. Identification of 33 rice
aquaporin genes and analysis of their expression and function. Plant &
Cell Physiology 46, 1568–1577.
Schmid M,
Uhlenhaut N H, Godard F, Demar M, Bressan R, Weigel D, Lohmann J U. 2003.
Dissection of floral induction pathways using global expression analysis. Development, 130, 6001–6012.
Schwarz S,
Grande A V, Bujdoso N, Saedler H, Huijser P. 2008. The microRNA regulated
SBP-box genes SPL9 and SPL15 control shoot maturation in Arabidopsis. Plant Molecular Biology, 67, 183–195.
Shao G N,
Lu Z F, Xiong J S, Wang B, Jing Y H, Meng X B, Liu G F, Ma H Y, Liang Y, Chen
F, Wang Y H, Li J Y, Yu H. 2019. Tiller bud formation regulators MOC1 and MOC3
cooperatively promote tiller bud outgrowth by activating FON1 expression
in rice. Molecular Plant, 12, 1090–1102.
Shikata M,
Koyama T, Mitsuda N, Ohme-Takagi M. 2009. Arabidopsis SBP-box genes SPL10, SPL11 and SPL2 control morphological change in association with
shoot maturation in the reproductive phase. Plant & Cell Physiology, 50, 2133–2145.
Sun F L,
Zhang W P, Xiong G S, Yan M X, Qian Q, Li J Y, Wang Y H. 2010. Identification
and functional analysis of the MOC1 interacting protein 1. Journal of
Genetics and Genomics, 37, 69–77.
Takeda T,
Suwa Y, Suzuki M, Kitano H, Ueguchi-Tanaka M, Ashikari M, Matsuoka M, Ueguchi
C. 2003. The OsTB1 gene negatively regulates lateral branching in
rice. The Plant Journal, 33, 513–520.
Tanaka W,
Ohmori Y, Ushijima T, Matsusaka H, Matsushita T, Kumamaru T, Kawano S, Hirano H
Y. 2015. Axillary meristem formation in rice requires the WUSCHEL ortholog TILLERS ABSENT1. The Plant Cell, 27,
1173–1184.
Wang B,
Smith S M, Li J Y. 2018. Genetic regulation of shoot architecture. Annual
Review of Plant Biology, 69, 437–468.
Wang D K,
Pei K M, Fu Y P, Sun Z X, Li S J, Liu H Q, Tang K, Han B, Tao Y Z. 2007.
Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa). Gene, 394, 13–24.
Wang J R,
Hu H, Wang G H, Li J, Chen J Y, Wu P. 2009. Expression of PIN genes in rice (Oryza sativa L.): Tissue specificity and regulation by hormones. Molecular Plant, 2, 823–831.
Wang J W,
Schwab R, Czech B, Mica E, Weigel D. 2008. Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana. The Plant Cell, 20, 1231–1243.
Wang M,
Qiao J Y, Yu C L, Chen H, Sun C D, Huang L Z, Li C Y, Geisler M, Qian Q, Jiang
A D, Qi Y H. 2019. The auxin influx carrier, OsAUX3, regulates rice root
development and responses to aluminium stress. Plant, Cell & Environment, 42, 1125–1138.
Wang Q,
Kohlen W, Rossmann S, Vernoux T, Theres K. 2014. Auxin depletion from the leaf
axil conditions competence for axillary meristem formation in Arabidopsis and tomato. The Plant Cell, 26, 2068–2079.
Xu M, Zhu
L, Shou H X, Wu P. 2005. A PIN1 family gene, OsPIN1, involved in
auxin-dependent adventitious root emergence and tillering in rice. Plant
& Cell Physiology, 46, 1674–1681.
Xu X Y, E
Z G, Zhang D Q, Yun Q B, Zhou Y, Niu B X, Chen C. 2021. OsYUC11-mediated auxin
biosynthesis is essential for endosperm development of rice. Plant Physiology, 185, 934–950.
Yamamoto
Y, Kamiya N, Morinaka Y, Matsuoka M, Sazuka T. 2007. Auxin biosynthesis by the YUCCA genes in rice. Plant Physiology, 143, 1362–1371.
Yu C L,
Sun C D, Shen C J, Wang S K, Liu F, Liu Y, Chen Y L, Li C Y, Qian Q, Aryal B,
Geisler M, Jiang D A, Qi Y H. 2015. The auxin transporter, OsAUX1, is involved
in primary root and root hair elongation and in Cd stress responses in rice (Oryza sativa L.). The Plant Journal, 83, 818–830.
Yuan H,
Qin P, Hu L, Zhan S, Wang S, Gao P, Li J, Jin M, Xu Z, Gao Q, Du A, Tu B, Chen
W, Ma B, Wang Y, Li S. 2019. OsSPL18 controls grain weight and grain
number in rice. Journal of Genetics and Genomics, 46, 41–51.
Zhang Y,
Schwarz S, Saedler H, Huijser P. 2007. SPL8, a local regulator in a subset of
gibberellin-mediated developmental processes in Arabidopsis. Plant Molecular Biology, 63, 429–439.
Zhao H, Ma
T, Wang X, Deng Y, Ma H, Zhang R, Zhao J. 2015. OsAUX1 controls lateral
root initiation in rice (Oryza sativa L.). Plant, Cell &
Environment, 38, 2208–2222.
Zhao J F,
Wang T, Wang M X, Liu Y Y, Yuan S J, Gao Y N, Yin L, Sun W, Peng L X, Zhang W
H, Wan J M, Li X Y. 2014. DWARF3 participates in an SCF complex and associates
with DWARF14 to suppress rice shoot branching. Plant & Cell Physiology, 55, 1096–1109.
|