Basso B, Bordas A, Dubos F, Morganx P, Marie-Etancelin C. 2012. Feed efficiency in the laying duck: Appropriate measurements and genetic parameters. Poultry Science, 91, 1065–1073.

Baxter M F A, Latorre J D, Dridi S, Merino-Guzman R, Hernandez-Velasco X, Hargis B M, Tellez-Isaias G. 2019. Identification of serum biomarkers for intestinal integrity in a broiler chicken malabsorption model. Frontiers in Veterinary Science, 6, 144.

Brunes L C, Baldi F, Lopes F B, Lôbo R B, Espigolan R, Costa M F O, Stafuzza N B, Magnabosco C U. 2021. Weighted single-step genome-wide association study and pathway analyses for feed efficiency traits in Nellore cattle. Journal of Animal Breeding and Genetics, 138, 23–44.

Cai W, Casey D S, Dekkers J C M. 2008. Selection response and genetic parameters for residual feed intake in Yorkshire swine. Journal of Animal Science, 86, 287–298.

Capper J L, Cady R A. 2020. The effects of improved performance in the U.S. dairy cattle industry on environmental impacts between 2007 and 2017. Journal of Animal Science, 98, skz291.

Do D N, Strathe A B, Ostersen T, Jensen J, Mark T, Kadarmideen H N. 2013. Genome-wide association study reveals genetic architecture of eating behavior in pigs and its implications for humans obesity by comparative mapping. PLoS ONE, 8, e71509.

Henriksson M, Cederberg C, Swensson C. 2014. Carbon footprint and land requirement for dairy herd rations: Impacts of feed production practices and regional climate variations. Animal, 8, 1329–1338.

Homma C, Hirose K, Ito T, Kamikawa M, Toma S, Nikaido S, Satoh M, Uemoto Y. 2021. Estimation of genetic parameter for feed efficiency and resilience traits in three pig breeds. Animal, 15, 100384.

Kavlak A T, Uimari P. 2019. Estimation of heritability of feeding behaviour traits and their correlation with production traits in Finnish Yorkshire pigs. Journal of Animal Breeding and Genetics, 136, 484–494.

Kenny D A, Fitzsimons C, Waters S M, Mcgee M. 2018. Invited review: Improving feed efficiency of beef cattle - the current state of the art and future challenges. Animal, 12, 1815–1826.

Kim S W, Jung Y S, Ahn J B, Shin E S, Jang H W, Lee H J, Kim T, Kim D Y, Bang D, Kim W H, Cheon J H. 2017. Identification of genetic susceptibility loci for intestinal Behçet’s disease. Scientific Reports, 7, 39850.

Kola B. 2018. Role of AMP-activated protein kinase in the control of appetite. Journal of Neuroendocrinology, 20, 942–951.

Ladeira G C, Pilonetto F, Fernandes A C, Bóscollo P P, Dauria B D, Titto C G, Coutinho L L, E Silva F F, Pinto L F B, Mourão G B. 2022. CNV detection and their association with growth, efficiency and carcass traits in Santa Inês sheep. Journal of Animal Breeding and Genetics, 139, 476–487.

Lander E, Kruglyak L. 1995. Genetic dissection of complex traits: Guidelines for interpreting and reporting linkage results. Nature Genetics, 11, 241–247.

Li B, Fang L, Null D J, Hutchison J L, Connor E E, Vanraden P M, VandeHaar MJ, Tempelman RJ, Weigel KA, Cole JB. 2019. High-density genome-wide association study for residual feed intake in Holstein dairy cattle. Journal of Dairy Science, 102, 11067–11080.

Li W, Liu R, Zheng M, Feng F, Liu D, Guo Y, Zhao G, Wen J. 2020. New insights into the associations among feed efficiency, metabolizable efficiency traits and related QTL regions in broiler chickens. Journal of Animal Dcience and Biotechnology, 11, 65.

Li W, Zheng M, Zhao G, Wang J, Liu J, Wang S, Feng F, Liu D, Zhu D, Li Q, Guo L, Guo Y, Liu R, Wen J. 2021. Identification of QTL regions and candidate genes for growth and feed efficiency in broilers. Genetics Selection Evolution, 53, 13.

Li Y, Bai X, Liu X, Wang W, Li Z, Wang N, Xiao F, Gao H, Guo H, Li H, Wang S. 2022. Integration of genome-wide association study and selection signatures reveals genetic determinants for skeletal muscle production traits in an F2 chicken population. Journal of Integrative Agriculture, 21, 2065–2075.

Liu T, Luo C, Wang J, Ma J, Shu D, Lund MS, Su G, Qu H. 2017. Assessment of the genomic prediction accuracy for feed efficiency traits in meat-type chickens. PLoS ONE, 12, e0173620.

Miao Y, Mei Q, Fu C, Liao M, Liu Y, Xu X, Li X, Zhao S, Xiang T. 2021. Genome-wide association and transcriptome studies identify candidate genes and pathways for feed conversion ratio in pigs. BMC Genomics, 22, 294.

Morova T, Ding Y, Huang CF, Sar F, Schwarz T, Giambartolomei C, Baca SC, Grishin D, Hach F, Gusev A, Freedman ML, Pasaniuc B, Lack NA. 2023. Optimized high-throughput screening of non-coding variants identified from genome-wide association studies. Nucleic Acids Research, 51, e18.

Mu Z, Wang B H, Lei L, Yang Y L, Tang Z L. 2023. Genome-wide association study identifies 12 new genetic loci associated with growth traits in pigs. Journal of Integrative Agriculture, 23, 217–227.

Na S W, Guan L L. 2022. Understanding the role of rumen epithelial host-microbe interactions in cattle feed efficiency. Animal Nutrition, 10, 41–53.

Nkrumah J D, Basarab J A, Price M A, Okine E K, Ammoura A, Guercio S, Hansen C, Li C, Benkel B, Murdoch B, Moore S S. 2004. Different measures of energetic efficiency and their phenotypic relationships with growth, feed intake, and ultrasound and carcass merit in hybrid cattle. Journal of Animal Science, 82, 2451–2459.

Onteru S K, Gorbach D M, Young J M, Garrick D J, Dekkers J C M, Rothschild M F. 2013. Whole genome association studies of residual feed intake and related traits in the pig. PLoS ONE, 8, e61756.

Paganoni B, Rose G, Macleay C, Jones C, Brown D, Kearney G, Ferguson M, Thompson A. 2017. More feed efficient sheep produce less methane and carbon dioxide when eating high-quality pellets. Journal of Animal Science, 95, 3839–3850.

Pasandideh M, Rahimi-Mianji G, Gholizadeh M. 2018. A genome scan for quantitative trait loci affecting average daily gain and Kleiber ratio in Baluchi Sheep. Journal of Genetics, 97, 493–503.

Qian Y, Zhang L, Cai M, Li H, Xu H, Yang H, Zhao Z, Rhie S K, Farnham P J, Shi J, Lu W. 2019. The prostate cancer risk variant rs55958994 regulates multiple gene expression through extreme long-range chromatin interaction to control tumor progression. Science Advance, 5, eaaw6710.

Seabury C M, Oldeschulte D L, Saatchi M, Beever J E, Decker J E, Halley Y A, Bhattarai E K, Molaei M, Freetly H C, Hansen S L, Yampara-Iquise H, Johnson K A, Kerley M S, Kim J, Loy D D, Marques E, Neibergs H L, Schnabel R D, Shike D W, Spangler M L, et al. 2017. Genome-wide association study for feed efficiency and growth traits in U.S. beef cattle. BMC Genomics, 18, 386.

Siberski-Cooper C J, Koltes J E. 2021. Opportunities to harness high-throughput and novel sensing phenotypes to improve feed efficiency in dairy cattle. Animals, 12, 15.

Silva É F, Lopes MS, Lopes PS, Gasparino E. 2019. A genome-wide association study for feed efficiency-related traits in a crossbred pig population. Animal, 13, 2447–2456.

Torres-Vázquez J A, Van Der Werf J H J, Clark S A. 2018. Genetic and phenotypic associations of feed efficiency with growth and carcass traits in Australian Angus cattle. Journal of Animal Science, 96, 4521–4531.

Voss M, Paterson J, Kelsall I R, Martín-Granados C, Hastie C J, Peggie M W, Cohen P T W. 2011. Ppm1E is an in cellulo AMP-activated protein kinase phosphatase. Cell Signal, 23, 114–124.

Wang K, Li M, Hakonarson H. 2010. ANNOVAR: Functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Research, 38, e164.

Wu P, Zhou K, Zhang J, Ling X, Zhang X, Zhang L, Li P, Wei Q, Zhang T, Wang X, Zhang G. 2022. Identification of crucial circRNAs in skeletal muscle during chicken embryonic development. BMC Genomics, 23, 330.

Yuan J, Wang K, Yi G, Ma M, Dou T, Sun C, Qu LJ, Shen M, Qu L, Yang N. 2015. Genome-wide association studies for feed intake and efficiency in two laying periods of chickens. Genetics Selection Evolution, 47, 82.

Zeng T, Zhang H, Liu J, Chen L, Tian Y, Shen J, Lu L. 2018. Genetic parameters of feed efficiency traits and their relationships with egg quality traits in laying period of ducks. Poultry Science, 97, 758–763.

Zhang D, Zhang X, Li F, Yuan L, Zhang Y, Li X, Zhao Y, Song Q, Li G, Wang W. 2021. Polymorphisms in ovine ME1 and CA1 genes and their association with feed efficiency in Hu sheep. Journal of Animal Breeding and Genetics, 138, 589–599.

Zhang X, Wang W, Mo F, La Y, Li C, Li F. 2017. Association of residual feed intake with growth and slaughtering performance, blood metabolism, and body composition in growing lambs. Scientific Reports, 7, 12681.

Zhao L, Li F, Yuan L, Zhang X, Zhang D, Li X, Zhang Y, Zhao Y, Song Q, Wang J, Zhou B, Cheng J, Xu D, Li W, Lin C, Wang W. 2022. Expression of ovine CTNNA3 and CAP2 genes and their association with growth traits. Gene, 807, 145949.

Zhou Y, Connor E E, Wiggans G R, Lu Y, Tempelman R J, Schroeder SG , Chen H, Liu G E. 2018. Genome-wide copy number variant analysis reveals variants associated with 10 diverse production traits in Holstein cattle. BMC Genomics,19, 314.