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Factors influencing seed reserve utilization during seedling establishment in maize inbred lines
LI Min, WEN Da-xing, SUN Qing-qing, WU Cheng-lai, LI Yan, ZHANG Chun-qing
2022, 21 (3): 677-684.   DOI: 10.1016/S2095-3119(21)63608-0
Abstract159)      PDF in ScienceDirect      
Strong seedlings are essential for high yield.  To explore the foundation of strong seedlings, we investigated various factors influencing the conversion and distribution of seed storage reserves during seedling establishment in maize inbred lines.  Three maize inbred lines were used to explore the effects of seed size, seed vigor, illumination duration, temperature, water content, and salt concentration of the seedling medium on the utilization of seed storage reserves during seedling establishment.  The results showed that the conversion rate of small seeds was 3.69 to 17.71% higher than that of large seeds.  Moreover, prolonged illumination time was conducive to the formation of strong seedlings.  However, low temperature, drought stress and salt stress reduced the conversion rate of seed storage reserves and increased the root/shoot ratio.  These results could be used to guide field management during seedling emergence and develop improved germplasm with a high conversion rate of seed storage reserves.
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Transcriptomic analysis reveals the transcription factors involved in regulating the expression of EPSPS gene, which confers glyphosate resistance of goosegrass (Eleusine indica)
ZHANG Chun, YU Chao-jie, ZHANG Tai-jie, GUO Wen-lei, TIAN Xing-shan
2021, 20 (8): 2180-2194.   DOI: 10.1016/S2095-3119(21)63682-1
Abstract169)      PDF in ScienceDirect      
Glyphosate inhibits the enzyme 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) and overexpression of the EPSPS gene is one of the molecular mechanisms conferring glyphosate resistance in weeds.  A regulatory sequence of EPSPS gene was isolated previously, and an alteration in its 5´-untranslated region (UTR) pyrimidine (Py)-rich stretch element is involved in the regulation of EPSPS expression in glyphosate-resistant (GR) Eleusine indica.  However, the transcription factors involved in this regulatory sequence remain to be elucidated.  In this study, we investigated the regulatory network of EPSPS overexpression associated genes in a GR E. indica population by RNA-seq.  The differentially expressed transcript analyses revealed that glyphosate treatment caused an increase in the expression of 2 752 unigenes and a decrease in the expression of 4 025 unigenes in the GR E. indica, compared to the glyphosate-susceptible (GS) E. indica.  Among them, 1 373 unigenes were identified to be co-expressed with the EPSPS gene in GR E. indica.  GO and KEGG pathway analyses showed that the up-regulated unigenes were mainly enriched in chloroplasts and associated with the shikimate biosynthesis pathway, chlorophy II and peroxisome metabolism processes.  Notably, the expression of a Shikimate kinase which catalyzed the conversion of Shikimate to Shikimate 3-phosphate (S3P, a substrate of EPSPS), was also up-regulated.  Eight transcription factors were identified as likely to be involved in the regulation of the EPSPS expression, and three of them (ARF2, ARF8 and BPC6) showed more binding sites because of a (CT)n insertion of the 5´-UTR Py-rich stretch element in GR.  However, the yeast one-hybrid assay illustrated that ARF8 and BPC6 could bind to the 5´-UTR Py-rich stretch element of wild type EPSPS, but could not bind to the mutated form.  Our data suggests that the transcriptional regulation of EPSPS expression is complex and was significantly altered in GR E. indica.  These discoveries provide new references for further study of the EPSPS overexpression mechanism that endows glyphosate resistance. 
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Ultrastructural studies of seed coat and cotyledon during rapeseed maturation
CAO Jian-bo, HE Li-min, Chinedu Charles NWAFOR, QIN Li-hong, ZHANG Chun-yu, SONG Yan-tun, HAO Rong
2021, 20 (5): 1239-1249.   DOI: 10.1016/S2095-3119(20)63189-6
Abstract118)      PDF in ScienceDirect      
Brassica napus L. (B. napus) is an important oil crop worldwide and it rapidly accumulates oil at late stage of seed maturation. However, little is known about the cellular mechanism of oil accumulation and seed color changes during the late stage of rapeseed development.  Here, we analyzed the ultrastructure of seed coat, aleurone and cotyledon in embryos of B. napus from 25 to 70 days after flowering (DAF).  The pigments, which were deposited on the cell wall of palisade cells in seed coat, determined dark black color of rapeseed.  The chloroplasts degenerated into non-photosynthetic plastids which caused the green cotyledon to turn into yellow.  The chloroplasts in aleurone and cotyledon cells respectively degenerated into remnants without inner and outer envelope membranes and ecoplasts with intact inner and outer envelope membranes.  From 40 to 70 DAF, there were degraded chloroplasts without thylakoid, oil bodies contacting with plastids or protein bodies, big starch deposits of chloroplasts degrading into small particles then disappearing, and small endoplasmic reticulum (ER) in aleurone and cotyledon cells.  Additionally, there were decreases of chlorophyll content and dramatic increases of oil content in rapeseed.  These results suggested that the rapid oil accumulation was independent on the NADPH synthesized by photosynthesis of chloroplasts and probably utilized other sources of reductant, such as the oxidative pentose phosphate pathway during the late stage of rapeseed development.  The triacylglycerol assembly presumably utilizes the enzymes in the plastid, cytosol or oil body of cotyledon and aleurone cells.
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Establishment and application of an accurate identification method for fragrant soybeans
ZHANG Yong-fang, ZHANG Chun-yan, ZHANG Bo, YIN Man, HONG Hui-long, YU Li-li, GAO Hua-wei, GU Yong-zhe, LIU Zhang-xiong, LI Fu-heng, QIU Li-juan
2021, 20 (5): 1193-1203.   DOI: 10.1016/S2095-3119(20)63328-7
Abstract135)      PDF in ScienceDirect      
In order to screen the aroma characteristics of soybean, a new method was established which can quickly quantify the content of 2-acetyl-1pyrroline (2-AP), an important compound related to soybean aroma, using gas chromatography-mass spectrometry (GC-MS).  Based on peak profile, total peak area and retention time as test indexes, an accurate identification method for fragrant soybeans was established.  The optimum parameters of the protocol consisted of column temperature 70°C, sample injector temperature 180°C, optimum extraction alcohol content 1 mL, NaCl content 0.1 g, ultrasonication time 10 min, and extraction time 1 h, which were established by using the orthogonal test of single factors and three factors with four levels (L9(3)4).  2-AP content of leaves had significant correlations with seeds, which were easier to measure.  The protocol was simple and easy to carry out, consumed only small amounts of reagents, and provided accurate and reliable results with good reproducibility.  A total of 101 soybean genotypes from different geographical sources were analyzed using this protocol.  The results showed that the average content of 2-AP was 0.29 mg L–1, ranging from 0.094 to 1.816 mg L–1, and the genetic diversity index was 0.54.  Among all genotypes-tested, they were classified into three grades, including seven elite genotypes identified as “grade one fragrant soybeans”, which were Zhonglong 608, Heinong 88, Ha13-2958, Hongmiandou, Heinong 82, Huangmaodou, and Jiyu 21.  These results provide both an identification technique and several elite aroma genotypes for gene discovery and good quality breeding in soybean.
 
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Exogenous strigolactones promote lateral root growth by reducing the endogenous auxin level in rapeseed
MA Ni, WAN Lin, ZHAO Wei, LIU Hong-fang, LI Jun, ZHANG Chun-lei
2020, 19 (2): 465-482.   DOI: 10.1016/S2095-3119(19)62810-8
Abstract144)      PDF in ScienceDirect      
Strigolactones (SLs) are newly discovered plant hormones which regulate the normal development of different plant organs, especially root architecture.  Lateral root formation of rapeseed seedlings before winter has great effects on the plant growth and seed yield.  Here, we treated the seedlings of Zhongshuang 11 (ZS11), an elite conventional rapeseed cultivar, with different concentrations of GR24 (a synthetic analogue of strigolactones), and found that a low concentration (0.18 µmol L–1) of GR24 could significantly increase the lateral root growth, shoot growth, and root/shoot ratio of seedlings.  RNA-Seq analysis of lateral roots at 12 h, 1 d, 4 d, and 7 d after GR24 treatment showed that 2 301, 4 626, 1 595, and 783 genes were significantly differentially expressed, respectively.  Function enrichment analysis revealed that the plant hormone transduction pathway, tryptophan metabolism, and the phenylpropanoid biosynthesis pathway were over-represented.  Moreover, transcription factors, including AP2/ERF, AUX/IAA, NAC, MYB, and WRKY, were up-regulated at 1 d after GR24 treatment.  Metabolomics profiling further demonstrated that the amounts of various metabolites, such as indole-3-acetic acid (IAA) and cis-zeatin were drastically altered.  In particular, the concentrations of endogenous IAA significantly decreased by 52.4 and 75.8% at 12 h and 1 d after GR24 treatment, respectively.  Our study indicated that low concentrations of exogenous SLs could promote the lateral root growth of rapeseed through interaction with other phytohormones, which provides useful clues for the effects of SLs on root architecture and crop productivity.
 
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Genetic effects and plant architecture influences on outcrossing rate in soybean
YAN Hao, ZHANG Jing-yong, ZHANG Chun-bao, PENG Bao, ZHANG Wei-long, WANG Peng-nian, DING Xiao-yang, LIU Bao-hui, FENG Xian-zhong, ZHAO Li-mei
2019, 18 (9): 1971-1979.   DOI: 10.1016/S2095-3119(18)62054-4
Abstract168)      PDF in ScienceDirect      
Outcrossing rate is an important determinant of cytoplasmic male sterile (CMS) breeding and hybrid seed production for heterosis in soybean.  Parental lines with a high outcrossing rate were screened for backcross breeding to obtain the high outcrossing rate maintenance B-lines and sterile A-lines.  Application in production practices will help to increase hybrid soybean production.  In this study, JLCMS82B and JLCMS89B were selected as parents for the construction of outcrossing rate segregation populations, and the progeny-array approach (PAA) and glyphosate resistant gene markers were used to determine outcrossing rates.  We found that: (1) The outcrossing rate between JLCMS82B and JLCMS89B was significantly different; (2) the outcrossing rate of the F2 segregating populations was a quantitative trait, though whether an additive or epistatic effect exists required analysis with a triple test intersection analysis; (3) agronomic traits correlated with outcrossing rate; outcrossing rate was the highest with plant height of about 84 cm, lower number of plant branches, earlier flowering time, larger angle between the branches and the main stem, and with more divergent plant morphology.  Correlation analysis between agronomic traits and outcrossing rate can effectively guide the screening of parents with a high outcrossing rate.
 
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Inheritance of steroidal glycoalkaloids in potato tuber flesh
PENG Zhen, WANG Pei, TANG Die, SHANG Yi, LI Can-hui, HUANG San-wen, ZHANG Chun-zhi
2019, 18 (10): 2255-2263.   DOI: 10.1016/S2095-3119(19)62718-8
Abstract154)      PDF in ScienceDirect      
Potato (Solanum tuberosum L.) is the third most important food crop worldwide after wheat and rice in terms of human consumption.  A critical domestication trait for potato was the decrease of toxic steroidal glycoalkaloids (SGAs) in tuber flesh.  Here, we used a diploid F2 segregating population derived from a cross between S. tuberosum and the wild potato species Solanum chacoense to map the quantitative trait loci (QTLs) associated with the regulation of SGAs content in tuber flesh.  In a three-year study, we identified two QTLs on chromosomes 2 and 8 affecting SGAs content in tuber flesh.  The QTL on chromosome 8 harbors 38 genes that are co-expressed with the GLYCOALKALOID METABOLISM genes.  These findings lay the foundation for exploiting the genes controlling SGAs content in tuber flesh and they provide a theoretical basis for the use of wild germplasm in potato breeding.
 
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Nectar secretion of RN-type cytoplasmic male sterility three lines in soybean [Glycine max (L.) Merr.]
ZHANG Jing-yong, SUN Huan, ZHAO Li-mei, ZHANG Chun-bao, YAN Hao, PENG Bao, LI Wen-bin
2018, 17 (05): 1085-1092.   DOI: 10.1016/S2095-3119(18)61910-0
Abstract520)      PDF in ScienceDirect      
Significant progress has been achieved in the use of heterosis in soybean and several soybean hybrids have been released in China. However, broad use of hybrid soybean seed is limited due to low seed setting of female parents.  Breeding cytoplasmic male sterile (CMS) lines with high out-crossing rate is necessary to solve the problem.  The objective of this study was to determine the relationship between out-crossing rate of CMS lines and their nectar secretion.  The daily nectar secretion rhythm, meteorological effect on nectar secretion, and differences in nectar secretion among genotypes and years were investigated in 27 soybean CMS lines (A-lines) with their maintainers (B-lines) and restorers (R-lines).  The correlation between out-crossing rate of CMS lines and nectar production was also evaluated.  Nectar secretion had diurnal variation.  Secretion initiated at about 06:00 for most materials and reached a peak at 07:00–08:30 after flower opened, then the nectar secretion decreased gradually.  A sub-peak appeared at about 13:00, while the nectar could not be detected at 17:00.  Nectar secretion was greatly influenced by the weather conditions.  The amount of nectar secretion increased gradually over time during periods of high temperature and no rainfall for several days.  Rainy weather and low temperatures inhibited nectar secretion.  There were obvious variations of nectar amount among different genotypes tested.  Significant nectar variation within a genotype among years was also observed, and the highest nectar secretion was 3-fold higher than the lowest.  The amount of nectar secretion from R-lines was significantly higher than that of A- and B-lines.  There was no significant difference in nectar secretion between A- and B-lines.  A- and B-lines with higher out-crossing rates secreted more nectar.  The amount of nectar secretion of A- and B-lines were significantly positively correlated with the out-crossing rate of A-lines.
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Structure and expression analysis of the sucrose synthase gene family in apple
TONG Xiao-lei, WANG Zheng-yang, MA Bai-quan, ZHANG Chun-xia, ZHU Ling-cheng, MA Feng-wang, LI Ming-jun
2018, 17 (04): 847-856.   DOI: 10.1016/S2095-3119(17)61755-6
Abstract628)      PDF in ScienceDirect      
Sucrose synthases (SUS) are a family of enzymes that play pivotal roles in carbon partitioning, sink strength and plant development.  A total of 11 SUS genes have been identified in the genome of Malus domestica (MdSUSs), and phylogenetic analysis revealed that the MdSUS genes were divided into three groups, named as SUS I, SUS II and SUS III, respectively.  The SUS I and SUS III groups included four homologs each, whereas the SUS II group contained three homologs.  SUS genes in the same group showed similar structural characteristics, such as exon number, size and length distribution.  After assessing four different tissues, MdSUS1s and MdSUS2.1 showed the highest expression in fruit, whereas MdSUS2.2/2.3 and MdSUS3s exhibit the highest expression in shoot tips.  Most MdSUSs showed decreased expression during fruit development, similar to SUS enzyme activity, but both MdSUS2.1 and MdSUS1.4 displayed opposite expression profiles.  These results suggest that different MdSUS genes might play distinct roles in the sink-source sugar cycle and sugar utilization in apple sink tissues.
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The effects of grain texture and phenotypic traits on the thin-layer drying rate in maize (Zea mays L.) inbred lines
SUN Le-xiu, LIU Shuang-xi, WANG Jin-xing, WU Cheng-lai, LI Yan, ZHANG Chun-qing
2016, 15 (2): 317-325.   DOI: 10.1016/S2095-3119(15)61052-8
Abstract1820)      PDF in ScienceDirect      
To explore the relation of maize grain texture and phenotypic traits with grain thin-layer drying rate, we observed the ultra- structure of maize grain, and tested three traits about the maize grain texture and four phenotypic traits. The vitreous part percentage was different (P<0.05) among different maize inbred lines. There was a significant relationship between the drying rate with grain texture and phenotypic traits. Main factors that influenced the drying rate were different during different drying stages. New results observed that empirical constants (k and N) in drying equation were different for seed of the 30 inbred lines of maize. The k of simplified diffusion equation and N of page equation were significantly influenced by both grain texture and phenotypic traits. These results could be used as guideline parameters for drying maize seeds having different grain characteristics during different drying stages.
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Investigating the mechanisms of glyphosate resistance in goosegrass (Eleusine indica) population from South China
ZHANG Chun, FENG Li, HE Ting-ting, YANG Cai-hong, CHEN Guo-qi, TIAN Xing-shan
2015, 14 (5): 909-918.   DOI: 10.1016/S2095-3119(14)60890-X
Abstract2010)      PDF in ScienceDirect      
Glyphosate has been used worldwide for nearly 40 years, and 30 types of resistant weeds have been reported. Glyphosate is mass-produced and widely used in China, but few studies and reports on glyphosate-resistant weeds and resistance mechanisms exist. Previous studies found a goosegrass species with high glyphosate resistance from orchards in South China and its glyphosate resistant mechanism was described in this study. The cDNA of 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS, EC 2.5.1.19), the target enzyme of glyphosate, was cloned from the glyphosate-resistant and -susceptible goosegrass, respectively, and referred as EPSPS-R and EPSPS-S. The Pro106 residue was known to be involved in the glyphosate resistance in most goosegrass populations. However, sequence analysis did not find the mutation at the Pro106 residue in the R biotype EPSPS amino acid sequence. The residue 133 and 382 was mutated in the R biotype EPSPS amino acid sequence instead, but it did not affect the EPSPS-S and EPSPS-R genes sensitivities to glyphosate. RT-PCR and Western blot analyses suggested that EPSPS mRNA and protein are mainly present in the shoot tissues both in the R and S goosegrass biotypes. The EPSPS-R rapidly responds to the glyphosate in R-biotype goosegrass and the induced expression was detected at 12 h post glyphosate treatment. The mRNA and protein expression of EPSPS-R increased constantly as the increasing concentration of glyphosate. However, the expression of the EPSPS-S was not induced significantly by glyphosate in the S goosegrass biotype. Quantification of real-time PCR results showed that the copy number of the EPSPS in R-biotype goosegrass was 4.7 times higher than that in the S goosegrass biotype. All the results implied that EPSPS gene amplification might mainly caused the glyphosate resistance of a goosegrass population collected from orchards in South China.
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Transgenic Expression of a Functional Fragment of Harpin Protein Hpa1 in Wheat Represses English Grain Aphid Infestation
XU Man-yu, ZHOU Ting, ZHAO Yan-ying, LI Jia-bao, XU Heng, DONG Han-song , ZHANG Chun-ling
2014, 13 (12): 2565-2576.   DOI: 10.1016/S2095-3119(13)60735-2
Abstract1451)      PDF in ScienceDirect      
The harpin protein Hpa1 produced by the rice bacterial blight pathogen promotes plant growth and induces plant resistance to pathogens and insect pests. The region of 10-42 residues (Hpa110-42) in the Hpa1 sequence is critical as the isolated Hpa110-42 fragment is 1.3-7.5-fold more effective than the full length in inducing plant growth and resistance. Here we report that transgenic expression of Hpa110-42 in wheat induces resistance to English grain aphid, a dominant species of wheat aphids. Hpa110-42-induced resistance is effective to inhibit the aphid behavior in plant preference at the initial colonization stage and repress aphid performances in the reproduction, nymph growth, and instar development on transgenic plants. The resistance characters are correlated with enhanced expression of defense-regulatory genes (EIN2, PP2-A, and GSL10) and consistent with induced expression of defense response genes (Hel, PDF1.2, PR-1b, and PR-2b). As a result, aphid infestations are alleviated in transgenic plants. The level of Hpa110-42-induced resistance in regard to repression of aphid infestations is equivalent to the effect of chemical control provided by an insecticide. These results suggested that the defensive role of Hpa110-42 can be integrated into breeding germplasm of the agriculturally significant crop with a great potential of the agricultural application.
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Mechanical Harvesting Effects on Seed Yield Loss, Quality Traits and Profitability of Winter Oilseed Rape (Brassica napus L.)
MA Ni, ZHANG Chun-lei, LI Jun, ZHANG Ming-hai, CHENG Yu-gui, LI Guang-ming, ZHANG Shujie
2012, 12 (8): 1297-1304.   DOI: 10.1016/S1671-2927(00)8658
Abstract1547)      PDF in ScienceDirect      
China is one of the most important rapeseed producing countries in the world. Effective mechanical harvesting time for decreasing harvesting loss of winter oilseed rape has been becoming a critical factor. An elite cultivar Zhongshuang 11 (Brassica napus L.) was employed in two rounds of field experiments from 2009 to 2011. Seeds were sown with machine, three combine harvesting times namely combine harvesting A, B, and C (CHA, CHB, and CHC) were designed and manual harvesting (MH) as control was performed at maturity. The harvesting treatments were determined according to color of pod and seed in the field. Seed yield loss and quality in different treatments were evaluated. Results showed that both seed yields and harvesting losses in 2009-2010 were higher than that in 2010-2011, whereas seed oil contents in 2010-2011 were higher than that in 2009-2010. The highest yield appeared in CHB, which was significantly higher than that in MH. Furthermore, harvesting loss in CHB were 50% that in MH. Seed oil content and chlorophyll exhibited no obvious difference between CHB and MH. Economic profit analysis demonstrated that mechanical sowing/combine harvesting (MS/CH) showed an input/output ratio of 1:1.6, and it was 1:1.2 in mechanical sowing/manual harvesting (MS/MH). Labor-cost accounted for more than 70% of the total cost in MS/MH, which led to low profitability to a great extent. Our results suggested that CHB was the optimum harvesting time for winter oilseed rape along the Yangtze River.
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