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TaSnRK2.4 is a vital regulator in control of thousand-kernel weight and response to abiotic stress in wheat
MIAO Li-li, LI Yu-ying, ZHANG Hong-juan, ZHANG Hong-ji, LIU Xiu-lin, WANG Jing-yi, CHANG Xiao-ping, MAO Xin-guo, JING Rui-lian
2021, 20 (
1
): 46-54. DOI:
10.1016/S2095-3119(19)62830-3
Abstract
(
173
)
PDF in ScienceDirect
Sucrose non-fermenting 1-related protein kinase 2 (SnRK2) is a plant-specific serine/threonine kinase involved in response to adverse environmental stimuli. Previous studies showed that TaSnRK2.4 was involved in response to abiotic stresses and conferred enhanced tolerance to multiple stresses in
Arabidopsis
. Further experiments were performed to decipher the underlying mechanisms and discover new functions. The genomic sequences of
TaSnRK2.4s
locating on chromosome 3A, 3B and 3D were obtained. Sequencing identified one and 13 variations of
TaSnRK2.4-3A
and
TaSnRK2.4-3B
, respectively, but no variation was detected in
TaSnRK2.4-3D
. The markers 2.4AM1, 2.4BM1 and 2.4BM2 were developed based on three variations. Association analysis showed that both
TaSnRK2.4-3A
and
TaSnRK2.4-3B
were significantly associated with thousand-kernel weight (TKW), and that SNP3A-T and SNP3B-C were favorable alleles for higher TKW. Yeast two-hybrid and split luciferase assays showed that TaSnRK2.4 physically interacted with abiotic stress responsive protein TaLTP3, suggesting that TaSnRK2.4 enhanced abiotic stress tolerance by activating TaLTP3. Our studies suggested that TaSnRK2.4 have potential in improving TKW and response to abiotic stress.
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dCAPS markers developed for nitrate transporter genes
TaNRT2L12s
associating with 1 000-grain weight in wheat
HUANG Jun-fang, LI Long, MAO Xin-guo, WANG Jing-yi, LIU Hui-min, LI Chao-nan, JING Rui-lian
2020, 19 (
6
): 1543-1553. DOI:
10.1016/S2095-3119(19)62683-3
Abstract
(
119
)
PDF in ScienceDirect
Nitrate transporters (NRTs) are regulators of nitrate assimilation and transport. The genome sequences of
TaNRT2L12-A
,
-B
and
-D
were cloned from wheat (
Triticum aestivum
L.), and polymorphisms were analyzed by sequencing.
TaNRT2L12-D
in a germplasm population was highly conserved. However, 38 single nucleotide polymorphisms (SNPs) in
TaNRT2L12-A
coding region and 11 SNPs in
TaNRT2L12-B
coding region were detected. Two derived cleaved amplified polymorphic sequences (dCAPS) markers A-CSNP1 and A-CSNP2 were developed for
TaNRT2L12-A
based on SNP-351 and SNP-729, and three haplotypes were identified in the germplasm population. B-CSNP1 and B-CSNP2 were developed for
TaNRT2L12-B
based on SNP-237 and SNP-1 227, and three haplotypes were detected in the germplasm population. Association analyses between the markers and agronomic traits in 30 environments and phenotypic comparisons revealed that A-CSNP2-A is a superior allele of shorter plant height (PH), length of penultimate internode (LPI) and peduncle length (PL), B-CSNP2-G is a superior allele of higher grain number per spike (GNS).
Hap
-6B-1 containing both superior alleles B-CSNP1-C and B-CSNP2-A is a superior haplotype of 1 000-grain weight (TGW). Expression analysis showed that
TaNRT2L12-B
is mainly expressed in the root base and regulated by nitrate. Therefore, TaNRT2L12 may be involved in nitrate transport and signaling to regulate TGW in wheat. The superior alleles and dCAPS markers of
TaNRT2L12-A/B
are beneficial to genetic improvement and germplasm enhancement with molecular markers-assisted selection.
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A wheat gene
TaSAP17-D
encoding an AN1/AN1 zinc finger protein improves salt stress tolerance in transgenic
Arabidopsis
XU Qiao-fang, MAO Xin-guo, WANG Yi-xue, WANG Jing-yi, XI Ya-jun, JING Rui-lian
2018, 17 (
03
): 507-516. DOI:
10.1016/S2095-3119(17)61681-2
Abstract
(
687
)
PDF in ScienceDirect
The stress-associated protein (SAP) multigene family is conserved in both animals and plants. Its function in some animals and plants are known, but it is yet to be deciphered in wheat (
Triticum aestivum
L.). We identified the wheat gene
TaSAP17-D
, a member of the SAP gene family with an AN1/AN1 conserved domain. Subcellular localization indicated that
TaSAP17-D
localized to the nucleus, cytoplasm, and cell membrane. Expression pattern analyses revealed that
TaSAP17-D
was highly expressed in seedlings and was involved in NaCl response, polyethylene glycol (PEG), cold, and exogenous abscisic acid (ABA). Constitutive expression of
TaSAP17-D
in transgenic Arabidopsis resulted in enhanced tolerance to salt stress, confirmed by improved multiple physiological indices and significantly upregulated marker genes related to salt stress response. Our results suggest that
TaSAP17-D
is a candidate gene that can be used to protect crop plants from salt stress.
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Polymorphism and association analysis of a drought-resistant gene
TaLTP-s
in wheat
LI Qian, WANG Jing-yi, Nadia Khan, CHANG Xiao-ping, LIU Hui-min, JING Rui-lian
2016, 15 (
06
): 1198-1206. DOI:
10.1016/S2095-3119(15)61189-3
Abstract
(
1494
)
PDF in ScienceDirect
Lipid transfer protein (LTP) is a kind of small molecular protein, which is named for its ability to transfer lipid between cell membranes. It has been proved that the protein is involved in the responding to abiotic stresses. In this study,
TaLTP
-s, a genomic sequence of TaLTP was isolated from A genome of wheat (
Triticum aestivum
L). Sequencing analysis exhibited that there was no diversity in the coding region of
TaLTP
-s, but seven single nucleotide polymorphisms (SNPs) and 1 bp insertion/deletion (InDel) were detected in the promoter regions of different wheat accessions. Nucleotide diversity (π) in the region was 0.00033, and linkage disequilibrium (LD) extended over almost the entire
TaLTP
-s region in wheat. The dCAPS markers based on sequence variations in the promoter regions (SNP-207 and SNP-1696) were developed, and three haplotypes were identified based on those markers. Association analysis between the haplotypes and agronomic traits of natural population consisted of 262 accessions showed that three haplotypes of
TaLTP
-s were significantly associated with plant height (PH). Among the three haplotypes, HapIII is considered as the superior haplotype for increasing plant height in the drought stress environments. The G variance at the position of 207 bp could be a superior allele that significantly increased number of spikes per plant (NSP). The functional marker of
TaLTP
-s provide a tool for marker-assisted selection regarding to plant height and number of spikelet per plant in wheat.
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