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The miR164-TaNAC14 module regulates root development and abiotic-stress tolerance in wheat seedlings
CHI Qing, DU Lin-ying, MA Wen, NIU Ruo-yu, WU Bao-wei, GUO Li-jian, MA Meng, LIU Xiang-li, ZHAO Hui-xian
2023, 22 (4): 981-998.   DOI: 10.1016/j.jia.2022.08.016
Abstract497)      PDF in ScienceDirect      

Previous studies have revealed the miR164 family and the miR164-targeted NAC transcription factor genes in rice (Oryza sativa) and Arabidopsis that play versatile roles in developmental processes and stress responses.  In wheat (Triticum aestivum L.), we found nine genetic loci of tae-miR164 (tae-MIR164 a to i) producing two mature sequences that down-regulate the expression of three newly identified target genes of TaNACs (TaNAC1, TaNAC11, and TaNAC14) by the cleavage of the respective mRNAs.  Overexpression of tae-miR164 or one of its target genes (TaNAC14) demonstrated that the miR164-TaNAC14 module greatly affects root growth and development and stress (drought and salinity) tolerance in wheat seedlings, and TaNAC14 promotes root growth and development in wheat seedlings and enhances drought tolerance, while tae-miR164 inhibits root development and reduces drought and salinity tolerance by down-regulating the expression of TaNAC14.  These findings identify the miR164-TaNAC14 module as well as other tae-miR164-regulated genes which can serve as new genetic resources for stress-resistance wheat breeding.

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The roles of microRNAs in regulating root formation and growth in plants
YAN Xiao-xiao, LIU Xiang-yang, CUI Hong, ZHAO Ming-qin
2022, 21 (4): 901-916.   DOI: 10.1016/S2095-3119(21)63818-2
Abstract174)      PDF in ScienceDirect      
MicroRNAs (miRNAs) are small (ca. 20–24 nucleotides) non-coding RNAs that have recently been recognized as key post-transcriptional modulators of gene expression; and they are involved in many biological processes in plants, such as root growth and development.  The miRNAs regulate root elongation, lateral root (LR) formation and adventitious root (AR) development in response to hormone signaling, nutrient uptake and biotic/abiotic stress.  This review provides multiple perspectives on the involvement of miRNAs in regulating root growth and development in plants.  We also discuss several crucial mechanisms of miRNAs, their relationships with transcription factors and the target gene-mediated hormone signaling interactions in the regulation of root growth and development.
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Role of TRP channels and HSPs in thermal stress response in the aphid parasitoid Aphelinus asychis (Hymenoptera: Aphelinidae)
LIU Xiang, KANG Zhi-wei, YU Xing-lin, LI Fan, LIU Tong-xian, LI Qiang
2020, 19 (6): 1530-1542.   DOI: 10.1016/S2095-3119(19)62869-8
Abstract127)      PDF in ScienceDirect      
Aphelinus asychis is an important aphid endoparasitoid.  Under field and greenhouse conditions, high temperature is one of the factors limiting the application of A. asychis for biological pest control.  To explore the potential role of transient receptor potential (TRP) channels and heat shock proteins (HSPs) in this process, we identified 11 genes encoding TRP channels and nine genes encoding HSPs.  Three proteins (AasyTRPA5, AasyPyrexia, AasyPainless) that belong to transient receptor potential ankyrin (TRPA) subfamily and nine HSPs are involved in the response to high temperature.  We also investigated the survival of A. asychis and the response of the identified TRP channels and HSPs to high temperature.  The results showed that the maximum temperature that allowed A. asychis survival was approximately 41°C; females had higher survival rates than that of the males at 40 and 41°C.  Short-term heat-shock resulted in increased expression of Aasyshsp in males, and Aasyhsp40, Aasyhsp68, Aasyhsp70-4, Aasyhsp70-5 and Aasyhsp90 were upregulated and then downregulated, whereas Aasyhsp70-3 was upregulated at 41°C.  Moreover, Aasyhsp40 and Aasyhsp90 showed higher expression levels in females, while Aasyshsp and Aasyhsp70-3 presented opposite expression patterns.  At temperature above 35°C, expression of AasyPyrexia in females was significant higher than that in males, whereas AasyPainless and AasyTRPA5 presented higher expression in males at 40 and 41°C, respectively.  Altogether, these results indicate that protection against thermal stress in A. asychis is coordinated by TRP channels and HSPs.  These findings provide a basis for understanding the potential mechanism of A. asychis in response to high temperatures.
 
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Genetic parameter estimation and genome-wide association study (GWAS) of red blood cell count at three stages in a Duroc×Erhualian pig population
NAN Jiu-hong, YIN Li-lin, TANG Zhen-shuang, CHEN Jian-hai, ZHANG Jie, WANG Hai-yan, DU Xiao-yong, LIU Xiang-dong
2020, 19 (3): 793-799.   DOI: 10.1016/S2095-3119(19)62773-5
Abstract135)      PDF in ScienceDirect      
Red blood cells play an essential role in the immune system.  Moreover, red blood cell count (RBC) is an important clinical indicator of various diseases, including anemia, type 2 diabetes and the metabolic syndrome.  Thus, it is necessary to reveal the genetic mechanism of RBC for animal disease resistance breeding.  However, quite a few studies had focused on porcine RBC, especially at different stages.  Thus, studies on porcine RBC at different stages are needed for disease resistant breeding.  In this study, the porcine RBC of 20-, 33-, and 80-day old were measured, and genetic parameter estimation and genome-wide association study (GWAS) were both performed.  As a result, the heritability was about 0.6 at the early stages, much higher than that at 80 days.  Nine novel genome wide significant single nucleotide polymorphisms (SNPs), located at Sus scrofa chromosome (SSC)3, 4, 8, 9, 10 and 15, respectively, were identified.  Further, TGFβ2, TMCC2 and PPP1R15B genes were identified as important candidate genes of porcine red blood cell count.  So different SNPs and candidate genes were found significantly associated with porcine RBC at different stages, suggesting that different genes might play key roles on porcine RBC at different stages.  Overall, new evidences were offered in this study for the genetic bases of animal RBC, and that the SNPs and candidate genes would be useful for disease resistant breeding of pig.
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Derivation of soil Pb/Cd/As thresholds for safety of vegetable planting: A case study for pakchoi in Guangdong Province, China
LI Fu-rong, WEN Dian, WANG Fu-hua, SUN Fang-fang, WANG Xu, DU Ying-qiong, LIU Xiang-xiang, WAN Kai
2019, 18 (1): 179-189.   DOI: 10.1016/S2095-3119(18)61975-6
Abstract262)      PDF in ScienceDirect      
Regional guidelines for soil heavy metals, in conjunction with specific crops, are proposed to better assess soil environmental quality.  In this study, large amounts of soils with different levels of Pb/Cd/As pollution were collected in Guangdong Province, China, to carry out a pot experiment, which was closer to the actual situation and properties of the heavy metal contaminated soils.  Taking the widely planted vegetable pakchoi as the research object, we analyzed the correlations between the Pb/Cd/As concentrations in pakchoi and the total or available soil Pb/Cd/As concentrations and established their optimal regression equations.  And then, the total and available soil Pb/Cd/As thresholds for pakchoi were calculated according to the allowable Pb/Cd/As limits in pakchoi and were compared with the current soil assessment standards.  Furthermore, a lot of paired vegetable-soil samples in field were collected and their pollution situations were assessed by both the current limit thresholds and the calculated thresholds.  Obviously, it was more consistent to assess the Cd and As pollution situation of the vegetable and soil samples with the calculated soil thresholds than the current soil assessment thresholds.  It further proved that it was necessary to explore the soil heavy metal thresholds for safety of vegetable in specific regions, which would be more scientific and practical to guide safety production of local agricultural products and effective utilization of soil resources.
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A Seroprevalence Survey of Maedi-Visna Among Twenty-Four Ovine Floks from Twelve Regions of China
ZHANG Ke-shan, HE Ji-jun, LIU Yong-jie, SHANG You-jun , LIU Xiang-tao
2013, 12 (12): 2321-2323.   DOI: 10.1016/S2095-3119(13)60380-9
Abstract1045)      PDF in ScienceDirect      
Maedi-visna virus (MVV) is an ovine lentivirus that is widespread in many countries worldwide. Both clinical and subclinical MVV infections cause substantial economic losses. MVV infection in live sheep is usually diagnosed serologically, with antibody-positive sheep being regarded as infected. There have been few reports of maedi-visna in China, with no detailed epidemic analysis of MVV infection in ovine herds. In order to investigate the seroprevalence and spatial distribution of maedi-visna among ovine flocks in China, a total of 672 serum samples were collected from different ovine flocks in 12 regions (provinces, autonomous regions or municipalities) of China in 2011, and serum antibody levels were determined using a commercial ELISA Kit. This study represents the first investigation of the seroepidemiology of maedi-visna in China, indicating a circulation of MMV among sheep.
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VarietalDifferences in PlantGrowth, PhosphorusUptake and Yield Formation in Two Maize Inbred Lines Grown Under Field Conditions
CHEN Fan-jun, LIU Xiang-sheng, MI Guo-hua
2012, 12 (10): 1738-1743.   DOI: 10.1016/S1671-2927(00)8708
Abstract1162)      PDF in ScienceDirect      
Selection for phosphorus (P)-efficient genotypes and investigation of physiological mechanisms for P-use efficiency in maize has mainly been conducted at the seedling stage under controlled greenhouse conditions. Few studies have analyzed characteristics of plant growth and yield formation in response to low-P stress over the whole growth period under field conditions. In the present study, two maize inbred lines with contrasting yield performances under low-P stress in the field were used to compare plant growth, P uptake and translocation, and yield formation. Phosphorus accumulation in the P-efficient line 154 was similar to that of line 153 under high-P. Under low-P, however, P uptake in line 154 was three times greater than that in line 153. Correspondingly, P-efficient line 154 had a significantly higher yield than P-inefficient line 153 under low-P conditions (Olsen-P=1.60 mg kg-1), but not under high-P conditions (Olsen-P=14.98 mg kg-1). The yield difference was mainly due to differences in the number of ears per m2, that is, P-efficient line 154 formed many more ears under low-P conditions than P-inefficient line 153. Ear abortion rate was 53% in the P-inefficient line 153, while in line 154, it was only 30%. Low-P stress reduced leaf appearance, and delayed anthesis and the silking stage, but increased the anthesis-silking interval (ASI) to a similar extent in both lines. The maximum leaf area per plant at silking stage was higher in P-efficient line 154 than in P-inefficient line 153 under both P conditions. It is concluded that low-P stress causes intense intraspecific competition for limited P resources in the field condition which gives rise to plant-toplant non-uniformity, resulting in a higher proportion of barren plants. As soon as an ear was formed in the plant, P in the plant is efficiently reutilized for kernel development.
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Cytological Behavior of Hybridization Barriers Between Oryza sativa and Oryza officinalis
FU Xue-lin, LU Yong-gen, LIU Xiang-dong, LI Jin-quan , ZHAO Xing-juan
2011, 10 (10): 1489-1500.   DOI: 10.1016/S1671-2927(11)60143-0
Abstract1640)      PDF in ScienceDirect      
Oryza officinalis is one of the important wild species in the tertiary gene pool of Oryza sativa. It has a number of elite genes for rice breeding in resistance or tolerance. However, breeding barriers are so serious that the gene transfer is much difficult by sexual cross method between O. sativa and O. officinalis. Characteristics of the breeding barriers were systemically studied in this paper. When both the diploid (AA, 2n=2x=24) and autotetraploid (AAAA, 2n=4x=48) cultivated rice were crossed as maternal parents with O. officinalis (CC, 2n=2x=24), none F1 hybrid seeds were obtained. The young hybrid ovaries aborted at 13-16 d after pollinations (DAP). By rescuing hybrid embryos, in vitro F1 plantlets were obtained in 2x×2x combinations with the crossabilities lower than 0.5%. Lower rates of double-fertilization and abnormal development of hybrid embryo and endosperm were mainly observed in both combinations of 2x×2x and 4x×2x. Free endosperm nuclei in hybrid degenerated early at 1 DAP in a large scale. Almost no normal endosperm cells formed at 3 DAP. Development of a lot of embryos ceased at globular- or pear-shaped stage as well as some degenerated gradually. The hybrid plantlets were both male and female sterility. Due to the abnormal development, a diversity of abnormal embryo sacs formed in hybrids, and hybrid pollen grains were typically abortive. It showed that conflicts of genome A and C in hybrid induced abnormal meioses of meiocytes.
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