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Effects of LPA on the development of sheep in vitro fertilized embryos and attempt to establish sheep embryonic stem cells
ZHANG Xue-min, HUANG Xiang-hua, WANG Jing, XING Ying, LIU Fang, XIANG Jin-zhu, WANG Han-ning, YUE Yong-li, LI Xue-ling
2023, 22 (4): 1142-1158.   DOI: 10.1016/j.jia.2022.08.111
Abstract232)      PDF in ScienceDirect      

Lysophosphatidic acid (LPA) is a small molecule glycerophospholipid, which regulates multiple downstream signalling pathways through G-protein-coupled receptors to achieve numerous functions on oocyte maturation and embryo development.  In this study, sheep in vitro fertilized embryos were applied to investigate the effects of LPA on early embryos development and embryonic stem cell establishment.  At first, the maturation medium containing estrus female sheep serum and synthetic oviduct fluid (SOF) were optimized for sheep IVF, and then the effects of LPA were investigated.  From 0.1 to 10 μmol L–1, LPA had no significant effect on the cleavage rate (P>0.05), but the maturation rate and blastocyst rate increased dependently with LPA concentration (P<0.05), and the blastocyst morphology was normal.  When the LPA concentration was 15 μmol L–1, the maturation rate, cleavage rate and blastocyst rate decreased significantly (P<0.05), and the blastocyst exhibited abnormal morphology and could not develop into high-quality blastocyst.  Besides, the exogenous LPA increases the expression of LPAR2, LPAR4, TE-related gene CDX-2

and pluripotency-related gene OCT-4 in sheep early IVF embryos with the raise of LPA concentration from 0.1 to 10 μmol

L–1.  The expression of LPAR2, LPAR4, CDX-2 and OCT-4 from the LPA-0.1 μmol L–1 to LPA-10 μmol L–1 groups in early embryos were extremely significant (P<0.05), while the expression of these genes significantly decreased in 15 μmol L–1 LPA-treated embryos compared with LPA-10 μmol L–1 group (P<0.05).  The inner cell mass in 15 μmol L–1 LPA-treated embryos was also disturbed, and the blastocysts formation was abnormal.  Secondly, the sheep IVF blastocysts were applied to establish embryonic stem cells.  The results showed that LPA made the blastocyst inoculated cells grow towards TSC-like cells.  They enhanced the fluorescence intensity and mRNA abundance of OCT-4 and CDX-2 as the concentration increased from 0 to 10 μmol L–1, while 15 μmol L–1 LPA decreased OCT-4 and CDX-2 expression in the derived cells.  The expression of CDX-2 and OCT-4 in the blastocyst inoculated cells of LPA-1 μmol L–1 group and LPA-10 μmol L–1 group extremely significantly increased (P<0.05), but there was significant decrease in LPA-15 μmol L–1 group compared with LPA-10 μmol L–1 group (P<0.05).  Meanwhile, the protein expression of LPAR2 and LPAR4 remarkably increased after treatment of LPA at 10 μmol L–1 concentration.  This study references the IVF embryo production and embryonic stem cell research of domestic animals. 

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Physiology and defense responses of wheat to the infestation of different cereal aphids
LIU Fang-hua, KANG Zhi-wei, TAN Xiao-ling, FAN Yong-liang, TIAN Hong-gang, LIU Tong-xian
2020, 19 (6): 1464-1474.   DOI: 10.1016/S2095-3119(19)62786-3
Abstract101)      PDF in ScienceDirect      
Cereal aphids are major insect pests of wheat, which cause significant damages to wheat production.  Previous studies mainly focused on the resistance of different wheat varieties to one specific aphid species.  However, reports on the physiology and defense responses of wheat to different cereal aphids are basically lacking.  In this work, we studied the feeding behavior of three cereal aphids: the grain aphid, Sitobion avenae (Fabricius), the greenbugs, Schizaphis graminum (Rondani), and the bird cherry-oat aphid, Rhopalosiphum padi (Linnaeus) on winter wheat, and the physiology and defense responses of wheat to the infestation of these cereal aphids with focus on how these cereal aphids utilize divergent strategies to optimize their nutrition requirement from wheat leaves.  Our results indicated that S. graminum and R. padi were better adapted to penetrating phloem tissue and to collect more nutrition than S. avenae.  The harm on wheat physiology committed by S. graminum and R. padi was severer than that by S. avenae, through reducing chlorophyll concentration and interfering metabolism genes.  Furthermore, cereal aphids manipulated the plant nutrition metabolism by increasing the relative concentration of major amino acids and percentage of essential amino acids.  In addition, different cereal aphids triggered specific defense response in wheat.  All of these results suggested that different cereal aphids utilize divergent strategies to change the physiological and defense responses of their host plants in order to optimize their nutrition absorption and requirement.  These findings not only extend our current knowledge on the insect–plant interactions but also provide useful clues to develop novel biotechnological strategies for enhancing the resistance and tolerance of crop plants against phloem-feeding insects.
 
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Effects of a novel mesoionic insecticide, triflumezopyrim, on the feeding behavior of rice planthoppers, Nilaparvata lugens and Sogatella furcifera (Hemiptera: Delphacidae)
ZHU Jun, SUN Wen-qing, LI Yao, GE Lin-quan, YANG Guo-qing, XU Jian-xiang, LIU Fang
2020, 19 (10): 2488-2449.   DOI: 10.1016/S2095-3119(20)63197-5
Abstract149)      PDF in ScienceDirect      
The rice planthoppers, Nilaparvata lugens and Sogatella furcifera, are important sap-sucking pests of rice in Asia.  The mesoionic insecticide triflumezopyrim was previously shown to be highly effective in controlling both N. lugens and S. furcifera.  In this study, electropenetrography (EPG) was used to evaluate the effect of three triflumezopyrim concentrations (LC10, LC50 and LC90) on the feeding behavior of N. lugens and S. furcifera.  EPG signals of planthoppes indicated that there were six different waveforms NP, N1, N2, N3, N4, and N5, which corresponded to non-penetration, stylet penetration into epidermis, salivation, extracellular movement of stylet, sap ingestion in phloem, and water ingestion in xylem during feeding.  Compared to untreated controls, triflumezopyrim at LC50 and LC90 prolonged the duration of the non-penetration period by 105.3 to 333.7%.  The probing frequencies of N. lugens exposed to triflumezopyrim at LC10 and LC50 were significantly increased; however, the probing frequencies of S. furcifera showed a significant decrease when exposed to triflumezopyrim at all concentrations.  Triflumezopyrim exposure prolonged the duration of salivation and shortened the duration of extracellular movement.  The duration of phloem sap ingestion decreased from 37.2 to 77.7% in the LC50 and LC90 treatments, respectively.  Differences in feeding behavior in response to triflumezopyrim and pymetrozine were minimal.  In summary, the results show that the LC50 and LC90 concentrations of triflumezopyrim inhibit the feeding activities of N. lugens and S. furcifera mainly by prolonging the duration of non-penetration and by shortening the duration of phloem sap ingestion, which may foster more efficient use of triflumezopyrim in Asia.
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Selectivity and sublethal effects of some frequently-used biopesticides on the predator Cyrtorhinus lividipennis Reuter (Hemiptera: Miridae)
DAI Wei, LI Yao, ZHU Jun, GE Lin-quan, YANG Guo-qing, LIU Fang
2019, 18 (1): 124-133.   DOI: 10.1016/S2095-3119(17)61845-8
Abstract319)      PDF (783KB)(226)      
The green miridbug, Cyrtorhinus lividipennis, is an important predator of the rice brown planthopper, Nilaparvata lugens.  In this study, the selective toxicity of seven commercial biopesticides for C. lividipennis was examined under laboratory conditions; abamectin was the most selective to C. lividipennis, followed by matrine and azadirachtin.  Veratridine, rotenone, Bacillus thuringiensis and Beauveria bassiana showed less selectivity for C. lividipennis.  Subsequently, matrine, abamectin and azadirachtin were selected for sublethal assessments with respect to C. lividipennis due to their high toxicities to N. lugens C. lividipennis treated with sublethal concentrations (LC10 and LC20) of the three biopesticides could distinguish volatiles released from healthy and N. lugens-infested plants indicating that the biopesticides tested did not affect the foraging ability of surviving miridbugs.  Azadirachtin decreased the consumption capability of C. lividipennis when the densities of N. lugens were 20, 30, 40 and 50 insects per vial.  Sublethal concentration treatment did not impact the pre-oviposition period or egg hatchability of C. lividipennis.  However, the fecundity of C. lividipennis exposed to azadirachtin and abamectin increased by 27–41% compared to the untreated individuals.  In summary, abamectin or matrine together with C. lividipennis could be considered an effective, sustainable pest management strategy for rice.
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Identification and characterization of cell cultures with various embryogenic/regenerative potential in cotton based on morphological, cytochemical, and cytogenetical assessment
GUO Hui-hui, WU Jian-fei, CHEN Cui-xia, WANG Hong-mei, ZHAO Yun-lei, ZHANG Chao-jun, JIA Yin-hua, LIU Fang, NING Tang-yuan, CHU Zhao-hui, ZENG Fan-chang
2019, 18 (1): 1-8.   DOI: 10.1016/S2095-3119(17)61876-8
Abstract340)      PDF (10560KB)(457)      
Somatic embryogenesis (SE) plays a vital role in genetic transformation and massive propagation of important agronomical and economical crops.  Here, we conducted a systematic assessment of the morphological, cytochemical, and cytogenetical characteristics of six culture strains with various embryogenic/regenerative potential during SE process in cotton.  Results indicated that the six cell culture strains had stable ploidy levels, and did not reveal any relationship between the cytogenetic state and their morphogenetic potential.  Moreover, the six culture strains were compared via double staining with Evans blue and Acetocarmine to efficiently distinguish embryogenic and non-embryogenic cells and determine the embryogenic nature of the calli.  In addition, the kind of auxins added in medium affected not only growth property, color, size of cell clumps but also ploidy level and regeneration ability.  By combining analysis of morphological, cytochemical, and cytogenetical characteristics of the cell cultures, we are able to obtain and maintain homogeneous cell population with high morphogenic and regeneration ability and establish efficient somatic embryogenesis and regeneration system from short-term cell cultures in upland cotton, which highlight the application of biotechnological approaches in crop breeding, and above all, to better understand totipotency of cells in higher plants.
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A simple way to visualize detailed phylogenetic tree of huge genomewide SNP data constructed by SNPhylo
YANG Hai-long, DONG Le, WANG Hui, LIU Chang-lin, LIU Fang, XIE Chuan-xiao
2018, 17 (09): 1972-1978.   DOI: 10.1016/S2095-3119(18)62023-4
Abstract610)      PDF (10046KB)(470)      
Phylogenetic trees based on genome-wide single nucleotide polymorphisms (SNPs) among diverse inbreds could provide valuable and intuitive information for breeding and germplasm management in crops.  As a result of sequencing technology developments, a huge amount of whole genome SNP data have become available and affordable for breeders.  However, it is a challenge to perform quick and reliable plotting based on the huge amount of SNP data.  To meet this goal, a visualization pipeline was developed and demonstrated based on publicly available SNP data from the current important maize inbred lines, including temperate, tropical, sweetcorn, and popcorn.  The detailed phylogenetic tree plotted by our pipeline revealed the authentic genetic diversity of these inbreds, which was consistent with several previous reports and indicated that this straightforward pipeline is reliable and could potentially speed up advances in crop breeding.
 
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Ultrastructure of the sensilla on antennae and mouthparts of larval and adult Plutella xylostella (Lepidoptera: Plutellidae)
LI Yi-ping, DU Xiao, LIU Fang-fang, LI Yin, LIU Tong-xian
2018, 17 (06): 1409-1420.   DOI: 10.1016/S2095-3119(17)61844-6
Abstract519)      PDF in ScienceDirect      
Plutella xylostella (L.) (Plutellidae) is an important agricultural pest throughout the world.  In this study, the morphology of antennal and mouthpart sensilla in the larvae and adults of P. xylostella (L.) was observed by using a scanning electron microscope.  The larval antennae possess six sensilla basiconica, two sensilla chaetica and one sensillum styloconicum.  Larval mouthparts possess six types of sensilla: sensilla chaetica, sensilla digitiformia, sensilla epipharyngeal, sensilla basiconica, sensilla styloconica and sensilla placodea.  In the adult, seven types of sensilla are found on the antennae in males and six types of sensilla (sensilla basiconica absent) occur in females.  Sexual dimorphism is also found in the number and size of these sensilla on the antennae of adults.  We describe for the first time the five types of sensilla on the mouthparts of the adult of P. xylostella.  This study provides useful information for further research into the function of these sensilla, and better understanding the behavioral mechanisms involved in pest control.
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Preparation of dry flowable formulations of Clonostachys rosea by spray drying and application for Sclerotinia sclerotiorum control
WU Hong-qu, SUN Li-li, LIU Fang, Wang Zhi-ying, CAO Chuan-wang
2018, 17 (03): 613-620.   DOI: 10.1016/S2095-3119(17)61811-2
Abstract713)      PDF in ScienceDirect      
A dry flowable formulation of Clonostachys rosea with fungicidal activity against Sclerotinia sclerotiorum was prepared by spray drying.  The formulation was optimized by a four-factor, three-level orthogonal experiment to screen inert ingredients and spray-drying conditions.  The optimal dry flowable formulation of C. rosea included 30% C. rosea (ratio of conidia powder and its fermentation broth is 1:3), 3% Morwet EFW, 4% k12, 10% Morwet D425, 9% sodium salt of polynaphthalene sulphonic acid (NNO), 5% croscarmellose sodium, 5% (NH4)2SO4, 0.5% carboxymethyl cellulose sodium (CMC-Na), 1% oxalic acid and palygorskite (carrier) up to 100%.  The formulation exhibited good physical characteristics, such as high dispersibility, viability and a long shelf life.  Plate antagonism tests and pot trials indicated that the dry flowable formulation was very effective against S. sclerotiorum, with control efficiency of up to 88.30%.  This dry flowable formulation of C. rosea is a new potential commercial fungicide for spray drying to control S. sclerotiorum.  
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Genome-wide assessment of genetic diversity and fiber quality traits characterization in Gossypium hirsutum races
Kiflom Weldu Okubazghi, LI Xiao-na, CAI Xiao-yan, WANG Xing-xing, CHEN Hao-dong, ZHOU Zhong-li, WANG Chun-ying, WANG Yu-hong, LIU Fang, WANG Kun-bo
2017, 16 (11): 2402-2412.   DOI: 10.1016/S2095-3119(17)61671-X
Abstract843)      PDF in ScienceDirect      
Gossypium hirsutum races are believed to be potential reservoirs of desirable traits, which can play crucial roles to overcome the existing narrow genetic base of modern Upland cotton cultivars.  However, prior to utilizing the races in cotton improvement programs, understanding their genetic constitutions is needed.  Thus, this study used molecular and morphological techniques to characterize 110 G. hirsutum germplasm including 109 semi-wild accessions and one Upland cotton cultivar, CRI12.  In the study, 104 SSR markers detected 795 alleles, with an average of 7.64 alleles per marker, ranging from 3 to 14, and average polymorphism information content (PIC) value of 0.71.  And 96 of the markers were found to be highly informative, with PIC value≥0.50.  Pairwise genetic similarity coefficient across the accessions ranged from 0.19 to 1.00, with an average value of 0.46.  Morphological characterization was done using fiber length, fiber strength, micronaire, fiber uniformity index, and fiber elongation.  Pairwise taxonomic distance within the accessions ranged from 0.17 to 3.41, with a mean of 1.33.  The SSR and fiber quality traits data set based unweighted pair group method of arithmetic mean (UPGMA) analysis grouped the accessions into 7 and 12 distinct clusters, respectively, that corresponds well with the results of principal component analysis (PCA).  Our study revealed the existence of vast molecular and morphological diversities within the accessions and provided valuable information on each semi-wild accession for quick and better informed germplasm utilization in cotton breeding programs.   
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Wing patterning genes of Nilaparvata lugens identification by transcriptome analysis, and their differential expression profile in wing pads between brachypterous and macropterous morphs
LI Kai-yin, HU Ding-bang, LIU Fang-zhou, LONG Man, LIU Si-yi, ZHAO Jing, HE Yue-ping
2015, 14 (9): 1796-1807.   DOI: 10.1016/S2095-3119(14)60948-5
Abstract1347)      PDF in ScienceDirect      
The brown planthopper, Nilaparvata lugens is an economically important pest on rice plants. This species produces macropterous and brachypterous morphs in response to environmental cues, which makes it very difficult to control. The molecular basis of wing patterning in N. lugens is still unknown. It is necessary to identify wing patterning genes of N. lugens, and also to clarify the expression differences of wing patterning genes between macropterous and brachypterous morphs. High-throughput deep sequencing of transcriptome of N. lugens wing pad yielded 116 744 580 raw reads and 113 042 700 clean reads. All the reads were assembled into 55 963 unigenes with an average length of 804 bp. With the E-value cut-off of 1.0E–5,18 359 and 2 883 unigens had hits in NCBI-NR (NCBI non-redundant protein sequences) and NCBI-NT (NCBI nucleotide sequences) databases, respectively. A total of 16 502 unigenes were assigned to GO (gene ontology) classification, 9 709 ungenes were grouped into 26 COG (cluster of orthologous groups of proteins) classifications, and 6 724 unigenes were assigned to different KEGG (Kyoto encyclopedia of genes and genomes) pathways. In total, 56 unigenes which are homologous to wing patterning genes of Drosophila melanogaster or Tribolium castaneum were identified. Out of the 56 unigenes, 24 unigenes were selected, and their expression levels across the five nymphal stages between macropterous strain and brachypterous strain were examined by qRT-PCR. Two-way ANOVA analysis showed that development stage had significant effects on the expression level of all the 24 genes (P<0.05). The expression levels of 8 genes (Nlen, Nlhh, Nlsal, NlAbd-A, Nlwg, Nlvg, Nlexd and NlUbx) were significantly affected by wing morph. This is the first transcriptome analysis of wing pads of hemimetabolous insect, N. lugens. The identified wing patterning genes would be useful resource for future exploration of molecular basis of wing development. The 8 differentially expressed wing patterning genes between macropterous strain and brachypterous strain would contribute to explain molecular mechanism of wing-morph differentiation in N. lugens.
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Spatial Exploration of Multiple Cropping Efficiency in China Based on Time Series Remote Sensing Data and Econometric Model
ZUO Li-jun, WANG Xiao, LIU Fang , YI Ling
2013, 12 (5): 903-913.   DOI: 10.1016/S2095-3119(13)60308-1
Abstract1445)      PDF in ScienceDirect      
This study explored spatial explicit multiple cropping efficiency (MCE) of China in 2005 by coupling time series remote sensing data with an econometric model - stochastic frontier analysis (SFA). We firstly extracted multiple cropping index (MCI) on the basis of the close relationship between crop phenologies and moderate-resolution imaging spectroradiometer (MODIS) enhanced vegetation index (EVI) value. Then, SFA model was employed to calculate MCE, by considering several indicators of meteorological conditions as inputs of multiple cropping systems and the extracted MCI was the output. The result showed that 46% of the cultivated land in China in 2005 was multiple cropped, including 39% doublecropped land and 7% triple-cropped land. Most of the multiple cropped land was distributed in the south of Great Wall. The total efficiency of multiple cropping in China was 87.61% in 2005. Southwestern China, Ganxin Region, the middle and lower reaches of Yangtze River and Huanghuaihai Plain were the four agricultural zones with the largest rooms for increasing MCI and improving MCE. Fragmental terrain, soil salinization, deficiency of water resources, and loss of labor force were the obstacles for MCE promotion in different zones. The method proposed in this paper is theoretically reliable for MCE extraction, whereas further studies are need to be done to investigate the most proper indicators of meteorological conditions as the inputs of multiple cropping systems.
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The Cloning and Fluorescence In situ Hybridization Analysis of Cotton Telomere Sequence
LING Jian, CHENG Hua, LIU Fang, SONG Guo-li, WANG Chun-ying, LI Shao-hui, ZHANG Xiang-di, WANG Yu-hong, WANG Kun-bo
2012, 12 (9): 1417-1423.   DOI: 10.1016/S1671-2927(00)8672
Abstract1346)      PDF in ScienceDirect      
Telomeres form the ends of eukaryotic chromosomes and serve as protective caps that keep chromosomes structure independency and completeness. The first plant telomere DNA was isolated from Arabidopsis thaliana and was shown to have tandemly repeated sequence 5´-TTTAGGG-3´. The Arabidopsis-type telomere has been found in many plants, but several reports indicate that this sequence is absent in some plants. Up to now, no research has been conducted on the telomere of cotton. In this paper, the Arabidopsis-type telomere sequence was amplified and cloned using the primers designed based on the fragment containing telomere sequence in an Arabidopsis bacterial artificial chromosome (BAC). Fluorescence in situ hybridization (FISH) with cotton metaphase chromosomes using the Arabidopsis-type telomere sequence as probes indicated that the signals were located at all chromosome ends of seven diploid and two tetraploid cotton species with different signal intensities among chromosome complements of different cotton species, even between long and short arms of the same chromosome. To identify the signals of FISH, the genome DNA of Xinhai 7, a cultivar of Gossypium barbadense, digested by BAL-31 nuclease was introduced in this study. The result of BAL-31 digestion indicated that the hybridization signals of FISH represent the outermost DNA sequence of each cotton chromosomes. So we first proved that the telomeric repeats of cotton cross-hybridize with that of Arabidopsis. The results of terminal restriction fragment (TRF) showed significant variation in telomere length among cotton species. The telomere length of cultivated cotton was close to 20 kb and was larger than those of wild cotton species whose telomere length ranged from 6 to 20 kb.
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The Influence of Transgenic cry1Ab/cry1Ac, cry1C and cry2A Rice on Non- Target Planthoppers and Their Main Predators Under Field Conditions 
HAN Yu, XU Xue-liang, MA Wei-hua, YUAN Ben-qi, WANG Hui, LIU Fang-zhou, WANG Man-qun, WU
2011, 10 (11): 1739-1747.   DOI: 10.1016/S1671-2927(11)60172-7
Abstract2498)      PDF in ScienceDirect      
Transgenic Bt rice has been shown to be an effective means of controlling Lepidoptera pests of rice. However, the potential roles of transgenic rice on planthoppers and their predators need to be investigated before its commercialization. Population density, species dominance and population dynamics are important parameters of arthropods populations in field. So the impacts of three transgenic Bt rice strains expressing cry1Ab/cry1Ac, cry1C and cry2A on population density, species dominance and population dynamics of three species of planthoppers (Nilaparvata lugens, Sogatella furcifera and Laodelphax striatellus) and their three main predators (Cyrtorhinus lividipennis, Pirata subpiraticus and Theridium octomaculatum) were evaluated at three sites in Hubei Province, China, in the current study. The results showed that among three species of planthoppers, both in transgenic and non-transgenic rice field, the predominant species of planthoppers within phytophagous guild was S. furcifera at any site either growing season (46-50%). Significantly higher population density of N. lugens was observed in T2A-1 field relative to Minghui 63 field at Wuxue in 2010. The species dominance of predator, P. subpiraticus, in TT51 field was significantly higher than that in T1C-19 and T2A-1 fields in 2009 at Xiaogan site. Sampling date significantly influenced six arthropods except for P. subpiraticus in 2010. The interaction between rice strain×sampling date had no significant adverse effects on the population dynamics of three species of planthoppers and their predators, except for several individual species in 2009. The interaction among rice strain×sampling date×sampling site also had no significant effect on six arthropods except for S. furcifera in 2009. The results indicated that transgenic Bt rice expressing cry1Ab/cry1Ac, cry2A and cry1C had no significant adverse effects on the population dynamics of three planthoppers and their predators in most investigated data and sampling site.
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